Busch Lab

ZMP

HMHA1 (3 of 3)

Ensembl ID:
ENSDARG00000052496
Description:
histocompatibility (minor) HA-1 [Source:HGNC Symbol;Acc:17102]
Human Orthologue:
HMHA1
Human Description:
histocompatibility (minor) HA-1 [Source:HGNC Symbol;Acc:17102]
Mouse Orthologue:
Hmha1
Mouse Description:
histocompatibility (minor) HA-1 Gene [Source:MGI Symbol;Acc:MGI:1917969]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa16958 Nonsense Available for shipment Available now
sa19911 Nonsense Available for shipment Available now
sa38362 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa16958
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089158 Nonsense 206 1101 4 23
Genomic Location (Zv9):
Chromosome 2 (position 57450894)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 56600271
GRCz11 2 56724116
KASP Assay ID:
2259-2817.1 (used for ordering genotyping assays)
KASP Sequence:
GGACGCAGTGTGAAGTWGTTCTCTTCTCCATGTTTGTCAGGGTTCAGTTA[T/A]GAAGGCACCACTGACGCTCAGAAGAAAGACTTTGAGAAGGCCATTGAGAC
Long Flanking Sequence:
CAGAGCTGGGTGCACCTCTGAGGGGATCTAGTGGACTCAGACATCCATGTTAGCCAGTTAACAATGGAGCTAGAGTCACCAGGCAAACAGAAGCCCTGTCCATAATGCAAATCTACGTCTATGGGGAAGTGAATTTGCCACTCGAATGAAGCTCAAAATGTTCACGTGCTTATTTACATGCGAACATCGCAGTTTATTCGCATGTGCCACTTCTAATGTGAACACACCGTTAGTAAGACTAGCATTTTTTGCAGTTCAATTCTTCTGTTTTTTATTTTAATCACTATTTCATACCAAAAGGGCTGTATTTTTTGGCCAAGCCACATTGTCACCAACAAGAGCCCAGACTTTCTATACCAGTCACACAGTTTCTGACTAGGTCTCTTTCCTCTTTAAGTGATGTGACTTCTAGTTTTATTTGTTATTAAAGCAGAAGCACATGTTTGTTTTGGACGCAGTGTGAAGTTGTTCTCTTCTCCATGTTTGTCAGGGTTCAGTTA[T/A]GAAGGCACCACTGACGCTCAGAAGAAAGACTTTGAGAAGGCCATTGAGACCATTGCTGTAGCCTTTAGCAGCAAGTAAGACCCAACAGTCTGCTTTCACACTCATTACACACTCATTAACATACTCATATTTTATTTCAAAGCAATCAGAATTAAAAGCCCAAACCATATTTAATTATATGAATATTTATTTCACAGATAGATTGTATTGCACCAAAAATGTTAATGTATTGTCTATTAATAAAGTAAACATTATATACTGTATTTAGTAACACTTTAAACAATGGAACATTAATAAATGCTAATGTATTTACTTACATGAATAAACCACGAACAATACATTGATGAATGTATTTAAGTTCAAATATAGTTGTATTAAAAAGAATTAAATTTAATAAAAAATTGAATTAAATGTAATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19911
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089158 Nonsense 430 1101 11 23
Genomic Location (Zv9):
Chromosome 2 (position 57438253)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 56587630
GRCz11 2 56711475
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTAACCTACGTAAGGCCCGTCAGCTGTACATGAGCCGCTGTGAGGAGTA[C/A]GAGAGAGCCAGGACGGTAGCCAATAAGGTGGAAGAGGAACAAAGCGGTAC
Long Flanking Sequence:
AGATATTGCCCTGAGTTGCGATGCCTTACTGCATGCAGGGTGAAATTAAAAAATAAATAAATTGCATTAGAATAACACCACTAATACCTGTATTGCTCAGAGTAAGATCAGAGGAGTGTCAGTGTATGTGACTGGTCAGAGCATGTGTGTAATGTTTAACTGCACTTTCAGCTTTAGTATAATAACAAACAAAATAACTAGTATAATATTATGTTCTGTCATCATAGCAAAGAAATTAGTTGTTATAAATGTAGTTATTAAAAATGTTATGTTTATAAATGTGTTTATAAATGTTTCTCTCTGTTAAACAGCACTTGGGAAATATTTGGAAAAGACCAAAAAATTAACTGGAGGTCGAATCATTTTGTCTGTATTCGGCTGTATTCACCTTTATTTAGCGTTAGCAATAATAGAGTTGTGTATTGTTGTTTTGGTCAGGCTGATGCGGAGAGTAACCTACGTAAGGCCCGTCAGCTGTACATGAGCCGCTGTGAGGAGTA[C/A]GAGAGAGCCAGGACGGTAGCCAATAAGGTGGAAGAGGAACAAAGCGGTACAGGAAGCGGCTCAACCACTAAAGCTCTGGACAGGAAGAGACGACTAGAAGAGGAAGCACGCAACAAGGTCAGTGAAATCAAACAGGAAGTGATTTAACATGCAACACATTTCGTGTAAAGGGAGTGTGACTGTGCATTTGTGGTCAGATTTGGGAAGCCAGCAGTGTTTAACAGATTGACATCATCTGTTTTAGTTACTGTTATTTTCCATGTAAAATTGCAGTAGTGTTAAAGTTTAATGCAATGAAGTAATTAACTTTATTGTTTAGTGCAATAAAGAAACATGGCAAGAAAAAATAATGTGTACTCAGCTTACAGGGAATGCACTTGGAACATTCCATAACATTGCTTAAAGGGCCATGAAAGCCCCTCGTTTCAGCAGGGTGTTTTCACACCTCTACTTTGGAAAAAGCCAGAAAAGTGGGCGTGTCCAGCTCTGTTTAGGGGGGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa38362
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089158 Nonsense 939 1101 21 23
Genomic Location (Zv9):
Chromosome 2 (position 57413492)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 56562869
GRCz11 2 56686714
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGATGACAATGTTACGTTTGTGTCTCTCTAGGGTCTCAGAGCTGGAGCAG[G/T]AGAATAAAATGAGTGCCAGTAATTTAGGCATCGTGTTCGGGCCGACGCTA
Long Flanking Sequence:
ATGGCAACTGGTTTAAAAAGTCCTAGATTAAAAGAAGATGGCCTTTCTGTCTTGAACTACAGTAAAACAACTTTTTGTTTTGGGATTCTTTGTCAGCAGCTAAGAGTAAATCGTTGGTTATTTTCACTAATGCGGTTTCTGTACTGTGATGAGCCCTGAAACCTGACTGGAACACTTCAAAAACACTGTCAGTTATCATTATCAGCTGTCAGTCTTTTTTTTCCCTGCTCATTGTGCCTTTGCCGTGTGCTGTGTAAATGCAAATAATCAGACACGAGTCACTATTAAAAGATGATATAAGCAGGTCATCGAAGAAATTGGATGCAGTCACAAAATCTGAATTTACAATCAAGATCTGCAGTGTAAATGTCATAAAGTCATAAAATCTACACAAGCTTAAATATTACCCATCAGTCTAAAGAGCAGTGAATGTTGTTAATTGATGTAAAATGATGACAATGTTACGTTTGTGTCTCTCTAGGGTCTCAGAGCTGGAGCAG[G/T]AGAATAAAATGAGTGCCAGTAATTTAGGCATCGTGTTCGGGCCGACGCTAATGAGACCCAAACCCACCGGGGCCACAGTTTCCCTCTCGTCTCTGGTGGATTATCCTCATCAGGCCCGAATCGTGGAGGCTCTGATCGTCTTCCAGCAGAGCATCTTCATCTGCACGACCAAATCTCCTGCTCAGCGTCAGGTCTGATGATTATTCAGTCATTCATTCTGTTTCTTTTCGGCTTAGTCACTTTATTAATTCGGGGTCGCCACAACGGAATGAACCACCAACTTATCCAGCCTATGTTTTACGCAGCGGACGACCTTCCAGCCGCAATCTAACACTGGGAAACATCCATACACACTCATTCACATACACTACGGCCAATTTAGCTCATTAAATTCACCTGTACCGCATATCTTTGGACTGTTGGGGAAACCAGAGCACCCAGAGGAAACCCACACCAACACGGGGAGAACATGCAAACTCCACACTGATGATTGTTCAATT
Associated Phenotype:
Not determined