ZMP
si:ch211-236k19.8
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate Lix1 homolog (Mouse) like (LIX1L) [Source:UniProtKB/TrEMBL;Acc:A
Human Orthologue:
LIX1
Human Description:
Lix1 homolog (chicken) [Source:HGNC Symbol;Acc:18581]
Mouse Orthologue:
Lix1
Mouse Description:
limb expression 1 homolog (chicken) Gene [Source:MGI Symbol;Acc:MGI:1913893]
Alleles
There are 5 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa17265 | Nonsense | Available for shipment | Available now |
| sa38523 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa17184 | Nonsense | Available for shipment | Available now |
| sa10387 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa17265
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000073951 | Nonsense | 29 | 255 | 1 | 5 |
| ENSDART00000140305 | Nonsense | 29 | 128 | 1 | 3 |
| ENSDART00000144816 | Nonsense | 43 | 290 | 2 | 6 |
Genomic Location (Zv9):
Chromosome 5 (position 68401001)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 64142501 |
| GRCz11 | 5 | 64823665 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAGAAACAAGCAGCAGRCGTGATGATGGAGATRGAGAATCTGGTAGTGTA[T/G]GAGTCCATTCCTTCACCCAGTCCTCCATTCATATRCTACGTCACATTACC
Long Flanking Sequence:
AGCAGCAGCTATGTGATGTCAATATAAACCAAAATCTCTGAAAATAGTTTTTAGCACCTTGTTGAATCCTTTCCTCAATAAATTAAAGCTATATTAAAGGCAAACAGGATATTAGCAAGGTTGACCAAATAAAGTGGCTGACGAGTATGTATTTAAAAGCATAGTTCACCCACAATATTTACTTCTTTTTTTCTCAGCCTAAAGTGGTTCCAAACCTTCATGAGTTTCTTTACTCTGTTGAAGACCAAAGAAGCTAAAAACCTGTAACCATTGACTTCCATAGTAGACCATAAAAATAAATAAATACTATTGGTTACAGGTTTCCAGCATTCAAACAGGTTTGGAACAAGGGTTAGTAAATGATGCAGGATTTTCAGTGAACTAGCCCTTTAATATGATCTTTTCTTGCTTCTAGTGAATGTCGTGGGAATGCTTCACAAGTTCTGGGAGCAGAAACAAGCAGCAGGCGTGATGATGGAGATAGAGAATCTGGTAGTGTA[T/G]GAGTCCATTCCTTCACCCAGTCCTCCATTCATATGCTACGTCACATTACCAGGTGGCAGCTGCTTCGGCAATTTCAAGGTAAGTGAACTGAATTAAAAGTGCCGTTATACTTTTATTTGTCATATTATATGAGATACATTTACACACTCTTTTTAATTTTTCAGAAGGTAGCTTTTCAGACTTTTTTCTTACATTGAAGTAGGTGTTTAGCTAAAACCACACTGAAATAAATTATTCAAAGATGATTCCTTGAATTTACTAAAATATTTTAAGTTAAGTGGTTGTAAAAAATTTGTAAATCGTAATACCCTCGATCTCGGGGCTCCCTCCCGTAAGAAGGGCGAGAGGGGAGTTCGAGCTCAGGTAGGTCTCAAGAACTCCCCTGCTGTCGTTTGAGAAGTGTAAACTTGGTTGATAATTTGGTTTTGGCTATGTTGTATGTTTTTGGACAGCGGGAGGAAACCCATGACCACACGGTGAGAGCTGAAACTCCGCACAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa38523
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000073951 | Nonsense | 185 | 255 | 5 | 5 |
| ENSDART00000140305 | None | None | 128 | None | 3 |
| ENSDART00000144816 | Nonsense | 199 | 290 | 6 | 6 |
Genomic Location (Zv9):
Chromosome 5 (position 68392096)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 64133596 |
| GRCz11 | 5 | 64814760 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCAGCGTCTGGACGAGCGCACGCGCAGCCACATGGCACTGGACTGGTTA[C/T]AGAAGGAGCTTCAGTCACCCGGCCTGCTGTCCCAGGAGCTGCAGCTGGCT
Long Flanking Sequence:
CTGGCCTCCGCTACATGTGCGTTACACTTATTAATACAATGACTATGTTTACTATGTTTTGAGAGCTGAGGTGTGAGCTGAGCTATGGTGTGAGGGCTTTGCAATCAAAATATGTTATTATAATGGAAGTCAATGGGGCAAAACATGTATTTTCTCAAAACATGTATCAAAATAAGATTTGCAACCAACAATCATTCTGTTTTAGAAAGCTCTAGACAAATTAAGCCTCAAAATCACCCCAGAGTGGATGAAAGCATCCCCAACAGCACAGAAGGGTTAACTATTGTTTACTTCTTTTCTGTGGCCAAGTGTTTGTTTTGATTTTCCTAATTTAGAAAATATATATAAAAAAACATAACTTATTGGTTGAATCAAGCCTCCTGCTTCATTGAAAGAACTCTCACACATGTTGTAACGGCGTTTCCCAGGAAGTGATCCAGTACTACTCTCAGCAGCGTCTGGACGAGCGCACGCGCAGCCACATGGCACTGGACTGGTTA[C/T]AGAAGGAGCTTCAGTCACCCGGCCTGCTGTCCCAGGAGCTGCAGCTGGCTGTGAAGGAGCTCGGGGAGGCACGGAGAACCGGCAGGGAGCTCCGCTTCTACAAGGAGAAGAAAGAAATCCTCAGTTTAGCTCTCAGTCATGCTGACGCCGAGGACCTGGAGGAGGAAATGTCCTGGAGAGAAGCAACTGAGTTTGACTGTTTTGAGGAAAGGAGGACCGATACGAATGAAAGCTGTCAGTTTCACTCTCAGGGCAGTGATGGAGAATCGCTGGAGTGAAATTTGTGAGAAGTTATGTATATAATGTACATGCTGCACTTTTTCAAAATAGGCCTGCTTTTGATAAGTATTTCCTATGGTGTGAGTATAACTTTTTAGGACTCTTATTTTGTAATGTGCGCCATGCAGAAGTGCGCTCGTTTTTGCAACTGTTTTAAAAACTTCCGATTCAGTTTGCCTACGGGAGAAATGGCAGAAAATGACCAAACTACTTGCTCTGCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17184
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000073951 | Nonsense | 235 | 255 | 5 | 5 |
| ENSDART00000140305 | None | None | 128 | None | 3 |
| ENSDART00000144816 | Nonsense | 249 | 290 | 6 | 6 |
| ENSDART00000073951 | Nonsense | 235 | 255 | 5 | 5 |
| ENSDART00000140305 | None | None | 128 | None | 3 |
| ENSDART00000144816 | Nonsense | 249 | 290 | 6 | 6 |
| ENSDART00000073951 | Nonsense | 235 | 255 | 5 | 5 |
| ENSDART00000140305 | None | None | 128 | None | 3 |
| ENSDART00000144816 | Nonsense | 249 | 290 | 6 | 6 |
Genomic Location (Zv9):
Chromosome 5 (position 68391946)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 64133446 |
| GRCz11 | 5 | 64814610 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACAAGGAGAAGAAAGAAATCCTCAGTTTAGCTCTCAGTCATGCTGACGCC[G/T]AGGACCTGGAGGAGGAAATRTCCTGGAGAGAAGCWACTGAGTTWGACTGT
Long Flanking Sequence:
TTTCTCAAAACATGTATCAAAATAAGATTTGCAACCAACAATCATTCTGTTTTAGAAAGCTCTAGACAAATTAAGCCTCAAAATCACCCCAGAGTGGATGAAAGCATCCCCAACAGCACAGAAGGGTTAACTATTGTTTACTTCTTTTCTGTGGCCAAGTGTTTGTTTTGATTTTCCTAATTTAGAAAATATATATAAAAAAACATAACTTATTGGTTGAATCAAGCCTCCTGCTTCATTGAAAGAACTCTCACACATGTTGTAACGGCGTTTCCCAGGAAGTGATCCAGTACTACTCTCAGCAGCGTCTGGACGAGCGCACGCGCAGCCACATGGCACTGGACTGGTTACAGAAGGAGCTTCAGTCACCCGGCCTGCTGTCCCAGGAGCTGCAGCTGGCTGTGAAGGAGCTCGGGGAGGCACGGAGAACCGGCAGGGAGCTCCGCTTCTACAAGGAGAAGAAAGAAATCCTCAGTTTAGCTCTCAGTCATGCTGACGCC[G/T]AGGACCTGGAGGAGGAAATGTCCTGGAGAGAAGCAACTGAGTTTGACTGTTTTGAGGAAAGGAGGACCGATACGAATGAAAGCTGTCAGTTTCACTCTCAGGGCAGTGATGGAGAATCGCTGGAGTGAAATTTGTGAGAAGTTATGTATATAATGTACATGCTGCACTTTTTCAAAATAGGCCTGCTTTTGATAAGTATTTCCTATGGTGTGAGTATAACTTTTTAGGACTCTTATTTTGTAATGTGCGCCATGCAGAAGTGCGCTCGTTTTTGCAACTGTTTTAAAAACTTCCGATTCAGTTTGCCTACGGGAGAAATGGCAGAAAATGACCAAACTACTTGCTCTGCAAACAAGTGTGTTCATGACTGTACATAAAAAGTAGAATAACCCATTAAGGAAAACATTTGCAACATGACCCTGCTGAAAAATCCAGCTTAAACCAGCCTAAGCTGGTTGGCTGGTATTAGCTGGTTGACTAGAGGGGTTTTGGCCATTTCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10387
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000073951 | Nonsense | 235 | 255 | 5 | 5 |
| ENSDART00000140305 | None | None | 128 | None | 3 |
| ENSDART00000144816 | Nonsense | 249 | 290 | 6 | 6 |
| ENSDART00000073951 | Nonsense | 235 | 255 | 5 | 5 |
| ENSDART00000140305 | None | None | 128 | None | 3 |
| ENSDART00000144816 | Nonsense | 249 | 290 | 6 | 6 |
| ENSDART00000073951 | Nonsense | 235 | 255 | 5 | 5 |
| ENSDART00000140305 | None | None | 128 | None | 3 |
| ENSDART00000144816 | Nonsense | 249 | 290 | 6 | 6 |
Genomic Location (Zv9):
Chromosome 5 (position 68391946)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 64133446 |
| GRCz11 | 5 | 64814610 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACAAGGAGAAGAAAGAAATCCTCAGTTTAGCTCTCAGTCATGCTGACGCC[G/T]AGGACCTGGAGGAGGAAATGTCCTGGAGAGAAGCWACTGAGTTTGACTGT
Long Flanking Sequence:
TTTCTCAAAACATGTATCAAAATAAGATTTGCAACCAACAATCATTCTGTTTTAGAAAGCTCTAGACAAATTAAGCCTCAAAATCACCCCAGAGTGGATGAAAGCATCCCCAACAGCACAGAAGGGTTAACTATTGTTTACTTCTTTTCTGTGGCCAAGTGTTTGTTTTGATTTTCCTAATTTAGAAAATATATATAAAAAAACATAACTTATTGGTTGAATCAAGCCTCCTGCTTCATTGAAAGAACTCTCACACATGTTGTAACGGCGTTTCCCAGGAAGTGATCCAGTACTACTCTCAGCAGCGTCTGGACGAGCGCACGCGCAGCCACATGGCACTGGACTGGTTACAGAAGGAGCTTCAGTCACCCGGCCTGCTGTCCCAGGAGCTGCAGCTGGCTGTGAAGGAGCTCGGGGAGGCACGGAGAACCGGCAGGGAGCTCCGCTTCTACAAGGAGAAGAAAGAAATCCTCAGTTTAGCTCTCAGTCATGCTGACGCC[G/T]AGGACCTGGAGGAGGAAATGTCCTGGAGAGAAGCAACTGAGTTTGACTGTTTTGAGGAAAGGAGGACCGATACGAATGAAAGCTGTCAGTTTCACTCTCAGGGCAGTGATGGAGAATCGCTGGAGTGAAATTTGTGAGAAGTTATGTATATAATGTACATGCTGCACTTTTTCAAAATAGGCCTGCTTTTGATAAGTATTTCCTATGGTGTGAGTATAACTTTTTAGGACTCTTATTTTGTAATGTGCGCCATGCAGAAGTGCGCTCGTTTTTGCAACTGTTTTAAAAACTTCCGATTCAGTTTGCCTACGGGAGAAATGGCAGAAAATGACCAAACTACTTGCTCTGCAAACAAGTGTGTTCATGACTGTACATAAAAAGTAGAATAACCCATTAAGGAAAACATTTGCAACATGACCCTGCTGAAAAATCCAGCTTAAACCAGCCTAAGCTGGTTGGCTGGTATTAGCTGGTTGACTAGAGGGGTTTTGGCCATTTCC
Associated Phenotype:
Not determined