ZMP
rag1
Ensembl ID:
ZFIN ID:
Description:
V(D)J recombination-activating protein 1Endonuclease RAG1E3 ubiquitin-protein ligase RAG1 [Source:Un
Human Orthologue:
RAG1
Human Description:
recombination activating gene 1 [Source:HGNC Symbol;Acc:9831]
Mouse Orthologue:
Rag1
Mouse Description:
recombination activating gene 1 Gene [Source:MGI Symbol;Acc:MGI:97848]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa32518 | Nonsense | Available for shipment | Available now |
| hu1999 | Nonsense | Confirmed mutation in F2 line | Not yet available |
Mutation Details
Allele Name:
sa32518
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000073913 | Nonsense | 790 | 1057 | 3 | 3 |
| ENSDART00000142917 | Nonsense | 790 | 1057 | 4 | 4 |
Genomic Location (Zv9):
Chromosome 25 (position 9236192)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 8930855 |
| GRCz11 | 25 | 9007923 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGAAAATCTCGAGCGCTATGAGATCTGGAGGAAAAATCCCTTCTCAGAGT[C/A]AGCAGACGAACTGCGTGACCGAGTCAAAGGTGTTTCTGCTAAGCCTTTCA
Long Flanking Sequence:
AGACGTCAGCGAGAAGCACGGATCTGGTCCCGCAGTTCCTGAGAAGGCAGTAAGGTTTTCCTTCACAATTATGTCCATCTCTATTCGACTTGAAGGGGAGGACGATGGCATCACCATCTTCCAGGAACAAAAGCCCAACTCTGAACTCTCCTGTAGACCTCTGTGTCTCATGTTTGTGGACGAGTCTGACCATGAGACCCTGACAGCCATCTTGGGACCTGTGGTAGCAGAACGGAAAGCCATGATGGAAAGTCGGCTCATCATTTCTGTTGGTGGTCTGCTACGCTCTTTTAGGTTCTTCTTCCGGGGCACAGGCTATGATGAGAAGATGGTCCGTGAAATGGAAGGCCTGGAAGCATCGGGCTCTACTTATATATGCACACTTTGTGACTCAACACGTGCTGAAGCCTCTCAAAACATGGTGCTGCATTCCATCACACGCAGCCATGATGAAAATCTCGAGCGCTATGAGATCTGGAGGAAAAATCCCTTCTCAGAGT[C/A]AGCAGACGAACTGCGTGACCGAGTCAAAGGTGTTTCTGCTAAGCCTTTCATGGAAACCCAGCCTACTCTGGATGCACTGCACTGTGATATTGGCAATGCGACTGAATTCTACAAAATCTTTCAGGATGAGATTGGAGAAGTCTACCAGAAGCCCAATCCGAGTCGAGAGGAGCGCCGCCGTTGGCGGTCAACCCTGGACAAGCAACTAAGAAAGAAAATGAAACTCAAGCCTGTGATGAGGATGAATGGAAACTATGCTCGTCGGCTGATGACACGTGAAGCGGTGGAGGCTGTTTGTGAGCTGGTTCCTTCTGCAGAACGACGTGAGGCTCTATTGAAACTGATGGACCTCTACTTGCAGATGAAGCCTGTATGGCGGTCAACTTGTCCCTCCAGAGACTGCCCTGACCAACTCTGTCAATACAGCTACAACTCTCAGCAATTTGCTGACCTTCTATCCTCCATGTTTAAGTATCGATATGATGGAAAAATCACCAACT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
hu1999
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000073913 | Nonsense | 797 | 1057 | 3 | 3 |
| ENSDART00000142917 | Nonsense | 797 | 1057 | 4 | 4 |
Genomic Location (Zv9):
Chromosome 25 (position 9236212)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 8930875 |
| GRCz11 | 25 | 9007943 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATCTCGAGCGCTATGAGATCTGGAGGAAAAATCCCTTCTCAGAGTCAGCAGACGAACTGCGTGAC[C/T]GAGTCAAAGGTGTTTCTGCTAAGCCTTTCATGGAAACCCAGCCTACTCTGGATGCACTGCACTGTGATATTGGCAATGCGACTGAATTCTACAAAATCTTTCAGG
Long Flanking Sequence:
GATCTGGTCCCGCAGTTCCTGAGAAGGCAGTAAGGTTTTCCTTCACAATTATGTCCATCTCTATTCGACTTGAAGGGGAGGACGATGGCATCACCATCTTCCAGGAACAAAAGCCCAACTCTGAACTCTCCTGTAGACCTCTGTGTCTCATGTTTGTGGACGAGTCTGACCATGAGACCCTGACAGCCATCTTGGGACCTGTGGTAGCAGAACGGAAAGCCATGATGGAAAGTCGGCTCATCATTTCTGTTGGTGGTCTGCTACGCTCTTTTAGGTTCTTCTTCCGGGGCACAGGCTATGATGAGAAGATGGTCCGTGAAATGGAAGGCCTGGAAGCATCGGGCTCTACTTATATATGCACACTTTGTGACTCAACACGTGCTGAAGCCTCTCAAAACATGGTGCTGCATTCCATCACACGCAGCCATGATGAAAATCTCGAGCGCTATGAGATCTGGAGGAAAAATCCCTTCTCAGAGTCAGCAGACGAACTGCGTGAC[C/T]GAGTCAAAGGTGTTTCTGCTAAGCCTTTCATGGAAACCCAGCCTACTCTGGATGCACTGCACTGTGATATTGGCAATGCGACTGAATTCTACAAAATCTTTCAGGATGAGATTGGAGAAGTCTACCAGAAGCCCAATCCGAGTCGAGAGGAGCGCCGCCGTTGGCGGTCAACCCTGGACAAGCAACTAAGAAAGAAAATGAAACTCAAGCCTGTGATGAGGATGAATGGAAACTATGCTCGTCGGCTGATGACACGTGAAGCGGTGGAGGCTGTTTGTGAGCTGGTTCCTTCTGCAGAACGACGTGAGGCTCTATTGAAACTGATGGACCTCTACTTGCAGATGAAGCCTGTATGGCGGTCAACTTGTCCCTCCAGAGACTGCCCTGACCAACTCTGTCAATACAGCTACAACTCTCAGCAATTTGCTGACCTTCTATCCTCCATGTTTAAGTATCGATATGATGGAAAAATCACCAACTACCTCCACAAGACCTTGGCC
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |