ZMP
stra6
Ensembl ID:
ZFIN ID:
Description:
stimulated by retinoic acid gene 6 homolog [Source:RefSeq peptide;Acc:NP_001038777]
Human Orthologue:
STRA6
Human Description:
stimulated by retinoic acid gene 6 homolog (mouse) [Source:HGNC Symbol;Acc:30650]
Mouse Orthologue:
Stra6
Mouse Description:
stimulated by retinoic acid gene 6 Gene [Source:MGI Symbol;Acc:MGI:107742]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa44305 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa44306 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa44305
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000067479 | Essential Splice Site | 121 | 670 | 4 | 17 |
The following transcripts of ENSDARG00000051874 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 25 (position 23318144)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 22497257 |
| GRCz11 | 25 | 22594805 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTCCTCAGTCATCATCCGCTTCCTTTCACTAAAGAAGTTGCGAACAAAGG[T/A]AAGATGACTAGATTTTTTTGTATTTGATTGATTGATTGATTGATTTAAGT
Long Flanking Sequence:
AGCAGAGTCACAGGCAGGGGCTGGAAATGGGTTCCGCCCTGGCCTCATAGGGGGGTCTGTGGCCTCATTTGAACCATGAAGCTGTGATGCAGAAGAGGTTAATAAAAGGTGCATGTCACAGCTGCAACAAGCCCCCAGTGGGCCATTAGAGGAGGTTAGCGAGGTTATGGGACCAACAGATTGTTTTCTCTTTATGTCCAAAGTTGGTGGTCATGCTGGTTCTTGCCATCCTTGCCAGACGCCAGAAGCTGAGTGACAATCAAAGAGGACTAACAGGTTTACTCAGGTCAGTTTGATGTCTTTTAGTAAGCAAACCAACCAAATAGCAAGATCTTCATGAAAATATGTTCTTTTCTTTATTTTAGCCCAGTAAACTTTTTAGACCACACGCAACACAAGGGCCTTGCCGTAGCGGTGTATGGAGTTCTCTTCTGCAAGCTGGTTGGAATGGTCCTCAGTCATCATCCGCTTCCTTTCACTAAAGAAGTTGCGAACAAAGG[T/A]AAGATGACTAGATTTTTTTGTATTTGATTGATTGATTGATTGATTTAAGTGGTGAAATGCAATATTTAAAGGGATAGTTCACACACACAAAAAAAACGGTTACCTCATTTATTTTCCTTTATGTTTCCCCATTGTCCAAAAACATGCAGTATATGTGAATTGAATAAACTAAATTGGCTGTAGTGTATGAGTGTGAATGAGTGTGTATAGTTGTTTCCCAGTACTGGGTTGTGGCTGGGAGGGCATTCGCTATGCAAAACATATGCTGAAATACTTGGCGGTTCATTCTGCTGTGGGGACCTCTGAAATAGAGACTAAGCCAAATGCTAAATTAATTCCCTATGTAGTTTTAAACATTTGTGTTTTTTTCTCCCGTTGAACACAAATGAAGAAAGTTTGAAGAATGCTGGTTGTTGGGTAGTCAAAAAATGACTTTGGAAGTCAATGGGTTCCAAAAACTAGCATTTTTTCAAAATATCTTCTTTTGTGTTCAACAGAAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa44306
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000067479 | Essential Splice Site | 121 | 670 | 5 | 17 |
The following transcripts of ENSDARG00000051874 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 25 (position 23325049)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 22504162 |
| GRCz11 | 25 | 22601710 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAAAATAGATGTTCAGCTTGACTACATTTATATTGTTGTTTTATTTTTGT[A/T]GAATTCTGGATGATTCTGGCACTTTTGTACTACCCCGCATTGTACTACCC
Long Flanking Sequence:
TGGTAACATCCACAGAGTCAATAGAAATAACATAGAAGAACAAATAAAAATAAATAAAAAAAATTATTCTAAAGACCAGGAATTATAAAATTTTTATATAATCTATTGATTTTTTTCCTTGCGTATGAGCGGGTGCAGCCATTTGAATCTTTTTGGCTCGAGACTTCCAGTACCATTCACTTTCATTGAACTTTAGACGTTAAAAATAGCTCAAATGCTGCTTGATTTTGATGTCTTGTTATTATATCATTCTACTTTGTCTGTATAGTCATAAACACACTTGTTTGAGAGGAGGTGGGTTGAGTGTTTATGCCATTTATTATTCCCAGTCATTTCTCCCATAGGTAACTGAAACAAAAGGTCTAAAACAATCACAAAAACGATGTGTTGAATAAGCACAACACTTTACATTCAGTACAGTGTTTTTAGGCCTAAAGGTATGAGTGGACAAAAAATAGATGTTCAGCTTGACTACATTTATATTGTTGTTTTATTTTTGT[A/T]GAATTCTGGATGATTCTGGCACTTTTGTACTACCCCGCATTGTACTACCCTCTCCTGGCCTGTGGTACACTCCACAACAAGGTTGGTTATGTCCTCGGTAGCCTGCTGTCATGGACACACTTTGGCATTCTGGTCTGGCAGAAGGTGGACTGCCCCAAAACACCACAGGTATAACTTACACTAGATATATGGGTATAAAACCCTAGCATTGACTTCCCTTAGATTTCTTTTTGTGTGCATTTAAGAGCCAGACTGAGTTGTCTGCAACTGTTTTGTGGTCTTGATATGACCAAGTAGGACTTGTTCTTGGATTACCATCTTCGTTGATCCTGGAACAACATTCCAATCAGAATTGAGGGATACCAAGGATACCATATGATTACCATTTACTTTAAGTTTATACTTACGGTTAGGTTTATGAACTTTTACATGATTGTATCCAGCTATTATTCCTCTCTGATTTTGGTCATAATTTACAGTCATGGTTGGGTTTAGGGGTA
Associated Phenotype:
Not determined