ZMP
ctu2
Ensembl ID:
ZFIN ID:
Description:
Cytoplasmic tRNA 2-thiolation protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6DC53]
Human Orthologue:
CTU2
Human Description:
cytosolic thiouridylase subunit 2 homolog (S. pombe) [Source:HGNC Symbol;Acc:28005]
Mouse Orthologue:
Ctu2
Mouse Description:
cytosolic thiouridylase subunit 2 homolog (S. pombe) Gene [Source:MGI Symbol;Acc:MGI:1914215]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa41034 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa27063 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa45299 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa41035 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa41034
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000073555 | Nonsense | 128 | 501 | 6 | 15 |
ENSDART00000132852 | None | None | 163 | None | 6 |
ENSDART00000147539 | Nonsense | 128 | 234 | 7 | 8 |
Genomic Location (Zv9):
Chromosome 7 (position 56562634)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 54997960 |
GRCz11 | 7 | 55299371 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTGTTAGATGGTGGAGCTTGTGGGCGAAGTGAAGACGAGCGGCAGACTT[C/A]AATATCTCAGCTGAAAAACATCTTCACACAGACTGGCTTCCCCTACTTTA
Long Flanking Sequence:
CCTGAATGTAATTGCAAGTCTCTGAATATTCATCAGCCAATCTGGAAAAACATTCAGACTTCATATAATATTGTTTTTTGATTGAGTAATATCACAAAATCTGAAACGAATTTTGTCCATACTGCAACTAGGATAATAAATACACAGAGCAGCATTTTCTGATTTCCCCCCTAGCTGTATCATTAACATAGTTATTTTCTTCTTTTATTAAAGTGCTGCTGTTTTGATACAATATGTTGCATAAATTTCTGTTAGTAAATGTGATTTCATGCTTTTGTTTTTCAGGGTCTGAGTCGAGATGCTCCCAAAAAGCTAAGATTTATGCCTGGAATTGTATACATTGATGGTAAATCTCTTTTACTTCAACGAACAGGATATTGTTTTTGTATTTTGAGCTTATGGTTGGCATCGAATGGTTGGTGATATTTTAAAAAGGATTTGATGATGTTATTTGTTAGATGGTGGAGCTTGTGGGCGAAGTGAAGACGAGCGGCAGACTT[C/A]AATATCTCAGCTGAAAAACATCTTCACACAGACTGGCTTCCCCTACTTTATAGTTCCTTTAGAGAAGGTAAACAGCCTGAAACCCAAAACATCAACAGCCTTTCAGAATCTCTTTCCTCTTTTACTAAATAAAATCAAATAAACTCTAGAGACTTGACTTGCCTTTCTTAATTAGTTTTTCATCTTGTTTTTAGTCTAAAAATCTAATCAAATTCTATATTCTTTACATTTTATACAAGTAAAAATATTATTTTATCTTTCAAAATGATAAGTTAAAAGTAGATGAGTTTTTCGTTTTAAAACAAACAAAATAATCCACCAGTGGTGTAAATGCAATTATTATGTTTTTTTTGGGGGGGGGGATGGAAATTAGTTTATTTTACTTGCCGCATTGGGAAGTAAGTTTTTTATTTTTATTTTACTTGTTTGAATAAAACCTCACTTAATTTTTAATTTTTAAAAATTTATTTCTGAAAACAAATCAGTATTTTTTCCTAATA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa27063
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000073555 | Nonsense | 214 | 501 | 7 | 15 |
ENSDART00000132852 | None | None | 163 | None | 6 |
ENSDART00000147539 | Nonsense | 214 | 234 | 8 | 8 |
Genomic Location (Zv9):
Chromosome 7 (position 56563679)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 54999005 |
GRCz11 | 7 | 55300416 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAGCTCAATCTAGAAGATTCTGCATATTTACCTGAACACAAGCTGGCGT[T/G]ACAGAGATTGTTCTCATCACTCAAGACACTGTCAGCCAAACAGGAGATGT
Long Flanking Sequence:
TAATGCATATTAATTAGAAATGGTAACACTAAAATAATGGTCCATTAGTTTTTGTTAATACTAATATAAACTATAAATAAACGTTTATTACGGTATTTTTTAAATCTTTGTTAATGTTATTTAATTTAAGTAACATTAGTTCATGATTGTTCACATTAACTCATTGTGCATTTACTAATGTTAACCAGCACAATTTTGAACTATGATTAAAAAAAGCTTTACAAGACTATTGATACTTAGTTAATGTTAAAAATTAAAGCTCCAGAAATACTCTGACTGGTGAAAAACTTAACTCTTAAATGTGTCTTAGGTTTTCAGTTTGCCCACCTCTGTCCTTGTACCTGGCACATCTGACCCAGACCCATCCAATCCCTGCTATAAGCAAGCTGTGGACAAGTATCTGAAAGAGAAGCAGAAGCTTAGAGAAGAGGAGGCCGTCTGTGCTGTGGCTCAGCTCAATCTAGAAGATTCTGCATATTTACCTGAACACAAGCTGGCGT[T/G]ACAGAGATTGTTCTCATCACTCAAGACACTGTCAGCCAAACAGGAGATGTTACAGACCCTGAGGTGAGTTTTTCAACCAACTCCTTTGCTTATCTTGTGTGTATTTTGTGTTTGCTTTAACAATGAGGATGCCAATTATCATGATAAAATCTGATCCATTTACTTGCAGTTTACAAAATTGTCTCCCTGTACAACCTTAATAAATAAATATTTTTTTTGCAAGTATTTATTAATAAACTAAAATATAATATATTTAATATATATATATATATATATATATATATATATATATATATATATATATATATATAATTAATATTAATATAAATATTAATTATTTAATATAATATTAATAAATAATTATTTAATAAATATATTTATTAAATAAATTAATAAACTTAAATATTCCAAAAAGGAATGTTATTCCCTCTTACTTTGGCTCTTGTTAAATATAGTAGGGGTGCACAATACACAAGATTTTTGGTTTTATTGTCACAATA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa45299
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000073555 | Nonsense | 215 | 501 | 7 | 15 |
ENSDART00000132852 | None | None | 163 | None | 6 |
ENSDART00000147539 | Nonsense | 215 | 234 | 8 | 8 |
Genomic Location (Zv9):
Chromosome 7 (position 56563681)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 54999007 |
GRCz11 | 7 | 55300418 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCTCAATCTAGAAGATTCTGCATATTTACCTGAACACAAGCTGGCGTTA[C/T]AGAGATTGTTCTCATCACTCAAGACACTGTCAGCCAAACAGGAGATGTTA
Long Flanking Sequence:
ATGCATATTAATTAGAAATGGTAACACTAAAATAATGGTCCATTAGTTTTTGTTAATACTAATATAAACTATAAATAAACGTTTATTACGGTATTTTTTAAATCTTTGTTAATGTTATTTAATTTAAGTAACATTAGTTCATGATTGTTCACATTAACTCATTGTGCATTTACTAATGTTAACCAGCACAATTTTGAACTATGATTAAAAAAAGCTTTACAAGACTATTGATACTTAGTTAATGTTAAAAATTAAAGCTCCAGAAATACTCTGACTGGTGAAAAACTTAACTCTTAAATGTGTCTTAGGTTTTCAGTTTGCCCACCTCTGTCCTTGTACCTGGCACATCTGACCCAGACCCATCCAATCCCTGCTATAAGCAAGCTGTGGACAAGTATCTGAAAGAGAAGCAGAAGCTTAGAGAAGAGGAGGCCGTCTGTGCTGTGGCTCAGCTCAATCTAGAAGATTCTGCATATTTACCTGAACACAAGCTGGCGTTA[C/T]AGAGATTGTTCTCATCACTCAAGACACTGTCAGCCAAACAGGAGATGTTACAGACCCTGAGGTGAGTTTTTCAACCAACTCCTTTGCTTATCTTGTGTGTATTTTGTGTTTGCTTTAACAATGAGGATGCCAATTATCATGATAAAATCTGATCCATTTACTTGCAGTTTACAAAATTGTCTCCCTGTACAACCTTAATAAATAAATATTTTTTTTGCAAGTATTTATTAATAAACTAAAATATAATATATTTAATATATATATATATATATATATATATATATATATATATATATATATATATATATAATTAATATTAATATAAATATTAATTATTTAATATAATATTAATAAATAATTATTTAATAAATATATTTATTAAATAAATTAATAAACTTAAATATTCCAAAAAGGAATGTTATTCCCTCTTACTTTGGCTCTTGTTAAATATAGTAGGGGTGCACAATACACAAGATTTTTGGTTTTATTGTCACAATAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa41035
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000073555 | Nonsense | 231 | 501 | 7 | 15 |
ENSDART00000132852 | None | None | 163 | None | 6 |
ENSDART00000147539 | Nonsense | 231 | 234 | 8 | 8 |
Genomic Location (Zv9):
Chromosome 7 (position 56563730)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 54999056 |
GRCz11 | 7 | 55300467 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACAGAGATTGTTCTCATCACTCAAGACACTGTCAGCCAAACAGGAGATGT[T/A]ACAGACCCTGAGGTGAGTTTTTCAACCAACTCCTTTGCTTATCTTGTGTG
Long Flanking Sequence:
TTGTTAATACTAATATAAACTATAAATAAACGTTTATTACGGTATTTTTTAAATCTTTGTTAATGTTATTTAATTTAAGTAACATTAGTTCATGATTGTTCACATTAACTCATTGTGCATTTACTAATGTTAACCAGCACAATTTTGAACTATGATTAAAAAAAGCTTTACAAGACTATTGATACTTAGTTAATGTTAAAAATTAAAGCTCCAGAAATACTCTGACTGGTGAAAAACTTAACTCTTAAATGTGTCTTAGGTTTTCAGTTTGCCCACCTCTGTCCTTGTACCTGGCACATCTGACCCAGACCCATCCAATCCCTGCTATAAGCAAGCTGTGGACAAGTATCTGAAAGAGAAGCAGAAGCTTAGAGAAGAGGAGGCCGTCTGTGCTGTGGCTCAGCTCAATCTAGAAGATTCTGCATATTTACCTGAACACAAGCTGGCGTTACAGAGATTGTTCTCATCACTCAAGACACTGTCAGCCAAACAGGAGATGT[T/A]ACAGACCCTGAGGTGAGTTTTTCAACCAACTCCTTTGCTTATCTTGTGTGTATTTTGTGTTTGCTTTAACAATGAGGATGCCAATTATCATGATAAAATCTGATCCATTTACTTGCAGTTTACAAAATTGTCTCCCTGTACAACCTTAATAAATAAATATTTTTTTTGCAAGTATTTATTAATAAACTAAAATATAATATATTTAATATATATATATATATATATATATATATATATATATATATATATATATATATATAATTAATATTAATATAAATATTAATTATTTAATATAATATTAATAAATAATTATTTAATAAATATATTTATTAAATAAATTAATAAACTTAAATATTCCAAAAAGGAATGTTATTCCCTCTTACTTTGGCTCTTGTTAAATATAGTAGGGGTGCACAATACACAAGATTTTTGGTTTTATTGTCACAATAGAGGTTTTGTTCAATTATAAAACACATTTTTTTTAATTAATTTTTGTTAAC
Associated Phenotype:
Not determined