ZMP
rpgrip1l
Ensembl ID:
ZFIN ID:
Description:
LOC557688 protein [Source:UniProtKB/TrEMBL;Acc:A1L275]
Human Orthologue:
RPGRIP1L
Human Description:
RPGRIP1-like [Source:HGNC Symbol;Acc:29168]
Mouse Orthologue:
Rpgrip1l
Mouse Description:
Rpgrip1-like Gene [Source:MGI Symbol;Acc:MGI:1920563]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa6815 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa24730 | Essential Splice Site | Available for shipment | Available now |
| sa3302 | Nonsense | F2 line generated | Not yet available |
| sa10096 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa6815
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000046224 | Nonsense | 35 | 931 | 3 | 18 |
| ENSDART00000126326 | Nonsense | 12 | 1233 | 1 | 24 |
| ENSDART00000128303 | Nonsense | 41 | 1269 | 2 | 27 |
Genomic Location (Zv9):
Chromosome 25 (position 37136737)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 35544353 |
| GRCz11 | 25 | 36049292 |
KASP Assay ID:
554-5006.1 (used for ordering genotyping assays)
KASP Sequence:
CTGTGCTSCTGTTTTCAGACTCCCTGCTGTCTCAGAACATCAGAGAGAGG[C/T]AGAACGTGTCCAAGTTGAGYCGGGAGGAGCTGGAGGACAAATACCTGCGR
Long Flanking Sequence:
ACAGGCATCTGTAGCTCCTCCCTCTTCTGTAAAAGGCACAATCTCATTTGCATTTAAAGCGACAGTCACTAAAACGCCACAGTTAGGATCAAAGCCTAATTTCAGAGAGTTATAATCATTATTTGTGTTGTATTTTGAGCTGAAACTTCACACACACACACACTCTAGGGACATCAGAGACTTATTTAACATCTTGTAAATATGGGAATTGTAGGCCACCTTCAATGTGAGGGATGTTTTTGATTGCAATTTGAAAGAGTTAAATTATCGATTTACATTGAATCCACACATGTCAATACTTTGATGTCAGGTTGATTGATTTATTCAAACCAGTTCTGTAATGTCAGTTTTGAAGTCTTTTCAACACCAAATGTGCTCTGCTTAGACCACACTGACTGCTGCATTATTAAAATGTGCATTATAATAAGAGTAAAGGCTGGTTTAATTAAACTGTGCTGCTGTTTTCAGACTCCCTGCTGTCTCAGAACATCAGAGAGAGG[C/T]AGAACGTGTCCAAGTTGAGCCGGGAGGAGCTGGAGGACAAATACCTGCGGCTGCAGGATGAAAACCTCACGCTTAAACAACACACATGCAAACAAGAAGACAAGATCCGCAGGTTTGAGCGCTCATTAGATTATAAACACACTGTTAATTCACAGGATCAGTGGATAGTTTATGAAATCCAGCTCGCAATACATTTTCTAAGAAATAATTGTGATGCAGATTGTTTGTTTGGGGGCCTATACTGAAATCTGACATATGGCCACATTTGAAACTGCATATAAGACATATTTAAAGGTGCATATTTGTAATTATTATGCTGGTAATTGCATCTATAAAGTGCAATATTTAGTCATACATGTTGCATATATGTACGCATATGACATCTGTTTTTATATCTGTGAAATACAAACATGAATTTGTATATTAAATATATGAAGAGTTCAGATGCAAAACCCTGTAAATGCCAGCTGAAACTTCCATTGAAAATGAGCATTTTTCTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa24730
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000046224 | Essential Splice Site | 337 | 931 | 9 | 18 |
| ENSDART00000126326 | Essential Splice Site | 314 | 1233 | 7 | 24 |
| ENSDART00000128303 | Essential Splice Site | 337 | 1269 | 9 | 27 |
Genomic Location (Zv9):
Chromosome 25 (position 37145267)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 35552883 |
| GRCz11 | 25 | 36057822 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATAGGATAACGATATGATGCTAATAACTATTGTAACTCGAGTCTGTTTCC[A/T]GTTACAAGAGAGAATCCAGGATTTGGAGAAAGAGAGAGACTTGCTCAAAG
Long Flanking Sequence:
TCCTTAAATTAGCAAAAATGCATTCTGATACGCCCTGAATGCGTTTGCGCCCTGCGCTTTGCTCTCTGCGCATGGACCGTCAAAACAGAGCCCTATGTGTCTGTATGTGTCTGTATGTGTGTGTGTGTGTATTTGCTGCCCTCTGCTGGTGTTGATGTGAGTATCAGCTGCTGTGTTTATGGTTGTCCGCAGAGCATGAAGACTCTAAAGGCCAGTCACGATGCTGCGCTGCTGAAGGTGGAGGATGGCAACCGGCAGCTGAAGGAGGAGAGACTGAAGAGTTTACAGCTGGAGACACAGATCACCAGCAGAGCCCTGGAGCACAGACACCTGCTGGAGGTACACACACACACACACAGCACACACAGTTTAGCTGTACTAAATGAGAAATGTGCTTACTAGCTGAAATAAATGAACTATAATATTTATAAACTACAAACCTTTGATGCAATAGGATAACGATATGATGCTAATAACTATTGTAACTCGAGTCTGTTTCC[A/T]GTTACAAGAGAGAATCCAGGATTTGGAGAAAGAGAGAGACTTGCTCAAAGAAAACTGCGATAAACTAGTGAAAAGGTGAGGAGATAAATATATTCAATACTATTCATTTTCCTTCAGCTTAGATCCTTAATTAATCAGGGTTTCAATCCAGCGTCTGATGAACACGTTCTCCACCCTCCCCCCTCACTACATATCAGATTTTGCCTACTCTTCATCACAAGGAAGACAAGTAGGAATCATTAATAAGTGTGTGTGTAATGTAATGTAATGTGTATTTATATAGCGTGTTTATCATGTATGGCCATACATCCAAAGCGCTTCACAATCATGAGGGAGGGGGGGGAGGTCTCTCCACACCACCACCAGTGTGCAGGACAACGGACAACGGCCAGTGCTTCACCACACACCAGCTATTGGAGGAGTGGAGAGACAGTGATAGAGCCAATTCGGTGGAAGGGGATGATTGGGAGGCCATGATCAGTAAGGGCCGATAGAGGGAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa3302
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000046224 | Nonsense | 805 | 931 | 17 | 18 |
| ENSDART00000126326 | Nonsense | 782 | 1233 | 15 | 24 |
| ENSDART00000128303 | Nonsense | 818 | 1269 | 17 | 27 |
Genomic Location (Zv9):
Chromosome 25 (position 37153357)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 35560973 |
| GRCz11 | 25 | 36065912 |
KASP Assay ID:
554-2852.1 (used for ordering genotyping assays)
KASP Sequence:
CCCAAAGGTCCTCACACCCAACCCAGTCCCTACATCGTTTACAAACTCTA[T/A]GACTTTCCTGACCACGATACGCCAATAATACCTTGCACCACYGAGCCTCA
Long Flanking Sequence:
AAAACCCCTCTAAAACCAGCCTGGTTTACCAGCTAAAACCAGCCAACCAGCCTAGGCTGGTTTAAGCTGGATTTTTCAGCAGGGCTCTTCTCGAAATTAGTTTGTAAAACTTCACTAATTACACGTGCACATGTTTGCAGGTGTTTCAGATGAGATCCAAGTGTTTGGTTCTCTTGAATACTGGCTCAAACTGAAGGTTTCTATGGATCAAGCCATTCGCCTTTACAAGGAGAGAGTCAAAGCACTTGGTTTCCTCAAAACAAGCCTGAGAGATAGCAAGGTATTGTTTACAACTCCATCTAGGGAGTTCCTACTTCTAAACATGCCAAAATGACTTGCTTCTTTTCTTTTTTTCAGGCTTTCTCAGTTCCTGCTCCTAGTTCTTCATCACTGATGAATGGAGATCTCAATGAACTAAGCATCAGCATACACTCCTGCTGTAACCTCAAACCCAAAGGTCCTCACACCCAACCCAGTCCCTACATCGTTTACAAACTCTA[T/A]GACTTTCCTGACCACGATACGCCAATAATACCTTGCACCACTGAGCCTCAGTTTGAGGATCACATGGTCTTCCCGATGACCATGAACTCCAACCTTGATGCCTTTTTGAGATCAGAGGCTCTGGTGGTTTATGTGTTTGATGATTTAGATGTTGAGAACCAGCTGTATTTGGGGAAGGCCAGAGTACCACTCGACTCACTGGCACACGATAAAACCATCACCGGTGAGGACAAACACTGTGTTGCAATGACATCATTTTACATAATTTGATTGATTTTAAGGTCAAAACTAGGCTGACTAGTCTAGTTTTAACAGCAGACGGGGCTCTTGCTTTTTTATTAGCAGATAGCACTCTAGGCTAGTTTTAACAGCAGACAGCACTAGTTTTTAACAGCAGATGGCGCTATAGGCTAGTTTTAACAGCTGATGGCGCTCTAGGCTAGTTTTAACAGCAGATGGCGCTCTAGGCTAGTTTTTAAACAGCAGATGGTACTCTAGCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10096
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000046224 | Nonsense | 849 | 931 | 17 | 18 |
| ENSDART00000126326 | Nonsense | 826 | 1233 | 15 | 24 |
| ENSDART00000128303 | Nonsense | 862 | 1269 | 17 | 27 |
Genomic Location (Zv9):
Chromosome 25 (position 37153489)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 35561105 |
| GRCz11 | 25 | 36066044 |
KASP Assay ID:
554-5586.1 (used for ordering genotyping assays)
KASP Sequence:
ATGAACTCCAACCTTGATGCCTTTTTGAGRTCAGAGGCTCTGGTGGTTTA[T/A]GTGTTTGATGATTTAGATGTTGAGAACCAGCTGTATTTGGGGAAGGCCAG
Long Flanking Sequence:
GTTTGCAGGTGTTTCAGATGAGATCCAAGTGTTTGGTTCTCTTGAATACTGGCTCAAACTGAAGGTTTCTATGGATCAAGCCATTCGCCTTTACAAGGAGAGAGTCAAAGCACTTGGTTTCCTCAAAACAAGCCTGAGAGATAGCAAGGTATTGTTTACAACTCCATCTAGGGAGTTCCTACTTCTAAACATGCCAAAATGACTTGCTTCTTTTCTTTTTTTCAGGCTTTCTCAGTTCCTGCTCCTAGTTCTTCATCACTGATGAATGGAGATCTCAATGAACTAAGCATCAGCATACACTCCTGCTGTAACCTCAAACCCAAAGGTCCTCACACCCAACCCAGTCCCTACATCGTTTACAAACTCTATGACTTTCCTGACCACGATACGCCAATAATACCTTGCACCACTGAGCCTCAGTTTGAGGATCACATGGTCTTCCCGATGACCATGAACTCCAACCTTGATGCCTTTTTGAGATCAGAGGCTCTGGTGGTTTA[T/A]GTGTTTGATGATTTAGATGTTGAGAACCAGCTGTATTTGGGGAAGGCCAGAGTACCACTCGACTCACTGGCACACGATAAAACCATCACCGGTGAGGACAAACACTGTGTTGCAATGACATCATTTTACATAATTTGATTGATTTTAAGGTCAAAACTAGGCTGACTAGTCTAGTTTTAACAGCAGACGGGGCTCTTGCTTTTTTATTAGCAGATAGCACTCTAGGCTAGTTTTAACAGCAGACAGCACTAGTTTTTAACAGCAGATGGCGCTATAGGCTAGTTTTAACAGCTGATGGCGCTCTAGGCTAGTTTTAACAGCAGATGGCGCTCTAGGCTAGTTTTTAAACAGCAGATGGTACTCTAGCCTTGTTTTCATCAGCAGATGGCGCTCAACGCTAGTTTTAACAGCAGACGGTGCTTTAGGCTATTTTTTAAACGCTGATGGCGCTTAAGGCTAGTTTAACAGCAGAAGGCACTCTAGGCTAGTTTTTAACAGCA
Associated Phenotype:
Not determined