Busch Lab

ZMP

C7U131_DANRE

Ensembl ID:
ENSDARG00000044635
Description:
Protein-tyrosine phosphatase delta-a [Source:UniProtKB/TrEMBL;Acc:C7U131]
Human Orthologue:
PTPRD
Human Description:
protein tyrosine phosphatase, receptor type, D [Source:HGNC Symbol;Acc:9668]
Mouse Orthologue:
Ptprd
Mouse Description:
protein tyrosine phosphatase, receptor type, D Gene [Source:MGI Symbol;Acc:MGI:97812]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa9956 Essential Splice Site Available for shipment Available now
sa9703 Nonsense Available for shipment Available now
sa34254 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa9956
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000065586 None 116 361 2 7
ENSDART00000128634 Essential Splice Site 29 141 3 7
Genomic Location (Zv9):
Chromosome 7 (position 75006922)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 73796364
GRCz11 7 73986635
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AACACGAAAGCTCACACCTCGCGGKTCATCAGTGCCAATCTGCCCTGCAA[C/T]AAATTCAAGAACCGGCTGGTGAACAKCATGCCGTACGAGTCGACGCGGGT
Long Flanking Sequence:
ATCGAGTCCGGAGAGAACGTCACCGGCATGGAGCTCGAGTTCAAGGTAAATCTCTATGCAGTTTTTATTGTTTTCATATTTATTTCTTTGGTGGTTCAGCTGTTATAACTGTGGCCTCACAGCAAGAAGGTTTCTGGTTCGGGTCCCGGCTGGGTCAGTTGGTGTTTCTGTGTGGAGTTTGCATGTTCTCCCCGTGTTGGTGTGGTTTCCTCCGGGTGCTCCGGTTTCCCCCACAGTCCAAACACATGCGCTATAGGGGAACTGATCAACTAAATTAGCCGTAGTGTATAAGTGTGTATGTGTGTGTGAATGAGTGTGTATGGGTGTTTCCCAGTACTGGCAGTTTTTTAGTGATGATTTCGTTATCTTTGACTCATTGGATGAAAACGCCGTTTTCCAGCTTTTTTGTGATTGTCACAGTGTTTTCTCTGTTTCCCACAGCGGTTAGCGAACACGAAAGCTCACACCTCGCGGTTCATCAGTGCCAATCTGCCCTGCAA[C/T]AAATTCAAGAACCGGCTGGTGAACATCATGCCGTACGAGTCGACGCGGGTGTGCCTGCAGCCGATCCGCGGCGTGGAGGGCTCGGACTACATCAACGGCAGCTTCATCGACGGATACAGGTAAGCACAACGATAGCACAAGACAATCCAGAACTTTCTGATTTAGTGGCTAATTCCTATAAATTTGTTCAATCTCGTTTGTACAATTGGTCATTGGTTTATTTTGATGGACGTTTGTTGAATTAACGTACATTGCATCTGCATGCCATCTAATTCTCATTAGATTATAAGTAGACTGTTAGGTTGGGGTTAGTGTAAGTTGACATGTACTTGCAAAGTGTCTTATAGTCAGTTAAATGTCTGATGAAAGAGCAGTATCAGCAGATATTAAGCAGACAGTCTACTAATACTCAAATGGACCATCAAAATAAAGTGTTACCGTACAATTTAGTACAATTTTCTTAATGAGGGTTGGGTTTAGGGGCGGGGTTTGGTGCCACG
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa5455
Status:
Allele not cryopreserved
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000065586 Essential Splice Site 156 361 2 7
ENSDART00000128634 Essential Splice Site 68 141 3 7
Genomic Location (Zv9):
Chromosome 7 (position 75007042)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 73796244
GRCz11 7 73986515
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGCGTGGAGGGCTCSGACTACATCAAYGGCAGCTTCATCGACGGATAYAG[G/T]TAAGCNNNACGATAGCACAAGACAATCCAGAACTTTCTGATTTAGTGGCT
Long Flanking Sequence:
AGCAAGAAGGTTTCTGGTTCGGGTCCCGGCTGGGTCAGTTGGTGTTTCTGTGTGGAGTTTGCATGTTCTCCCCGTGTTGGTGTGGTTTCCTCCGGGTGCTCCGGTTTCCCCCACAGTCCAAACACATGCGCTATAGGGGAACTGATCAACTAAATTAGCCGTAGTGTATAAGTGTGTATGTGTGTGTGAATGAGTGTGTATGGGTGTTTCCCAGTACTGGCAGTTTTTTAGTGATGATTTCGTTATCTTTGACTCATTGGATGAAAACGCCGTTTTCCAGCTTTTTTGTGATTGTCACAGTGTTTTCTCTGTTTCCCACAGCGGTTAGCGAACACGAAAGCTCACACCTCGCGGTTCATCAGTGCCAATCTGCCCTGCAACAAATTCAAGAACCGGCTGGTGAACATCATGCCGTACGAGTCGACGCGGGTGTGCCTGCAGCCGATCCGCGGCGTGGAGGGCTCGGACTACATCAACGGCAGCTTCATCGACGGATACAG[G/T]TAAGCACAACGATAGCACAAGACAATCCAGAACTTTCTGATTTAGTGGCTAATTCCTATAAATTTGTTCAATCTCGTTTGTACAATTGGTCATTGGTTTATTTTGATGGACGTTTGTTGAATTAACGTACATTGCATCTGCATGCCATCTAATTCTCATTAGATTATAAGTAGACTGTTAGGTTGGGGTTAGTGTAAGTTGACATGTACTTGCAAAGTGTCTTATAGTCAGTTAAATGTCTGATGAAAGAGCAGTATCAGCAGATATTAAGCAGACAGTCTACTAATACTCAAATGGACCATCAAAATAAAGTGTTACCGTACAATTTAGTACAATTTTCTTAATGAGGGTTGGGTTTAGGGGCGGGGTTTGGTGCCACGCCTCCTTTTAAAAATCACAGGTATCGAAGCTGACGGTGTTTTTCTGTCCGTGTGATCAGGCAGCAGAAGGCCTACATCGCCACACAGGGTCCTTTAGCTGAAACCACAGAAGACTTCTGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9703
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000065586 Nonsense 204 361 4 7
ENSDART00000128634 Nonsense 116 141 5 7
Genomic Location (Zv9):
Chromosome 7 (position 75008554)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 73794732
GRCz11 7 73985003
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCTTCAWCTTTGTRTGTGTGTGTGTGTTTCCAGGAGAAGTGCCATCAGTA[C/A]TGGCCCGCGGAGCGATCGGCCAGATATCAGTACTTTGTGGTGGATCCAAT
Long Flanking Sequence:
ATATACAAAATGCTCGTAAATTTCCTAAAAAATATATATATATAAATATATATATATTCATATATATATATATATATATATATATATATATATATATATATATATGAATATATATATATATATATATATATTACTAATATAAAAATCCGTGCTGGCGGACGGATGCGCTATAGAGGAACTGATCAACTAAACTGGCCGTAGTGTATGAGTGCGTATGGGTGTTTCCTAGTGCTGGGTTGCAGCTGAAAGGGCATCTGCTATGTAAAACATATGCTGGAATAGTAAATTATTACATAAGCATCAATATACATAGATGCTTTTCTTAAAAGGCAACATTAAGGTTGATTTAATTGTCATTTGAATGAATTATCTTGATTGTCTTTTCTTCATTATATTTCCCCTATTAATGAATGCTGATGTCAGTGTATTCTCCTGCTGTTGTGCACTAATGCTTCATCTTTGTATGTGTGTGTGTGTTTCCAGGAGAAGTGCCATCAGTA[C/A]TGGCCCGCGGAGCGATCGGCCAGATATCAGTACTTTGTGGTGGATCCAATGGCCGAATACAACATGCCGCAGTACATCCTGAGAGAGTTTAAAGTGACGGACGCGCGGGTGAGAAAACAGACATTCAGCTGACAGACCGAAAGCTCTGTTATCTGGAAAACACAAAACCAGCAGAGAAATGTGAACTCTGAGCTGCTCGTCAGGAGCTTTACAGTCGCCCACAGCGGAGGAATTAATCAAACCACACGAGTCTCGGATGTGGGCGACTGAATATATATAAATGTAGAAATATATAGCTGACAGAGAAACACAGAAAACCACACCAGACTGCTTCATTTCATGTAAATATCACATTCAGCCGTACATAAGACTCAGTGCAGAAATGTGGGTATATTTCACGCATTTTCCATTCATTTTTCATGAACTTGAATGGGAGTAAATGTATAAATTACAGTAAAATTAATCCATTATTATTGCAAAATAATGCCAAAATGTGATAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa34254
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000065586 Nonsense 255 361 5 7
ENSDART00000128634 None None 141 None 7
Genomic Location (Zv9):
Chromosome 7 (position 75010922)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 73792364
GRCz11 7 73982635
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTCAGGATGGACAGTCGCGGACCGTCAGGCAGTTTCAGTTCACAGACTG[G/A]CCAGAACAAGGAGTGCCAAAATCAGGGGAAGGTTTTATCGACTTCATCGG
Long Flanking Sequence:
GGAGTTGATGATAATAGCTGGCGATAACAAAGAGTCGACGATAACAAAGTTGGCAGTAACATAATTGATGCTAATAGTTGATGATAATGGAGTTGACGATAACAAAGTGGAAGGTCACATAGTTGATGAAAACCGAGTTGACGATAATAGTTGGAGATGACAGAGTTGACAATAACAGAAGTTGACAGTGACAGAGTTGGCAGTAACATAATTAACTTTAACAGAATTGATGATAAGTATATATTAAAAAGCAAAGTCTAAATTGACAGAATAAGTATAAATAGCAGAAGTGAAGAAAATAATCCCTGTGTTGCCTCCATTACGGCTCATGTTCACCAGGTCAAGTGATTGAAAACTATCAGTTAAGGAGAAATCTTATCAATGGTGGGAAAACAGTGCATGTAAGTCTGGAGAAACGCTGCAGATCTTTATGTTGGCCTGTTCTCCATGTTTCAGGATGGACAGTCGCGGACCGTCAGGCAGTTTCAGTTCACAGACTG[G/A]CCAGAACAAGGAGTGCCAAAATCAGGGGAAGGTTTTATCGACTTCATCGGCCAAGTGCATAAAACAAAAGAGCAGTTCGGTCAGGACGGACCCATTTCAGTCCACTGTAGGTAAGAAAACATCCGGCAGACGAGCAGAGGACGCTCTCCATCAGTACAGCAGAAGGAAAATCAGAACGTCTCTGAGAACTAATTATTATCTGATATCAAACAGCTGAGTGTAAGATACAGAGGATATAATCACATCAAATGTGTGTATGTGTGTGCAGTGCTGGTGTGGGCAGGACGGGGGTCTTCATCACACTCAGTATAGTTCTGGAGCGGATGCGCTATGAAGGAGTCGTGGACATCTTCCAGACCGTCAAGATGCTGAGAACGCAGCGGCCGGCGATGGTCCAGACTGAAGTAAGAACACATACTCGTACTCGATACACACACACACACACACACACACACAGAAACAGATACACACACACACACACACACACACACACACACAGG
Associated Phenotype:
Not determined