Busch Lab

ZMP

CDHR1 (2 of 2)

Ensembl ID:
ENSDARG00000044447
Description:
cadherin-related family member 1 [Source:HGNC Symbol;Acc:14550]
Human Orthologues:
CDH23, CDHR1
Human Descriptions:
cadherin-related 23 [Source:HGNC Symbol;Acc:13733]
cadherin-related family member 1 [Source:HGNC Symbol;Acc:14550]
Mouse Orthologue:
Cdhr1
Mouse Description:
cadherin-related family member 1 Gene [Source:MGI Symbol;Acc:MGI:2157782]

Alleles

There are 7 alleles of this gene:

Allele Name Consequence Status Availability
sa35383 Nonsense Available for shipment Available now
sa22186 Essential Splice Site Available for shipment Available now
sa18079 Nonsense Available for shipment Available now
sa22185 Essential Splice Site Available for shipment Available now
sa22184 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa35383
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000065278 Nonsense 39 755 1 15
Genomic Location (Zv9):
Chromosome 12 (position 50606370)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 48973214
GRCz11 12 48994743
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTTTGATAAGGGCTCTAAACAGTTCTTCAGTGTGGAGCCCAAATCTGGC[A/T]GAGTGACCCTGGTGGAGCATCTGGACAGAGAGGTCAGAGGTCATGCGAGT
Long Flanking Sequence:
ACAACACTGATACACAAAAGACACACACAACACTTATACACAACAGACACACACAACACTGATACACAACAGACACACACAACACTGATACACAAAAGACACACACAACACTGATACACAAAAGACACACACAACACTTATACACAACAGACACACACAACACTGATACACAACAGACACACACAACACTGATACACAACAGACACACACAACACTGATACACAACAGACACACACAACACTGATACACAACAGACACACACAACACTGATACACAACAGACACACACAACACTGATACACAACAGACACACACAACACTGATACACAACAGACACACACACAACACTGATGAACAATAATCATCATCGCTCTTTTCTTCTCCGCAGGGACTCATGTCTACACCCTGAACGGCTCTGACCCCGAGGGTGACCCTGTGACCTTTGGTGTGACCTTTGATAAGGGCTCTAAACAGTTCTTCAGTGTGGAGCCCAAATCTGGC[A/T]GAGTGACCCTGGTGGAGCATCTGGACAGAGAGGTCAGAGGTCATGCGAGTAATATAAGACTAATAATGTTCCTAACCGAATACTGATCATCACCGACCGCTGTTCATCACCGACCGCTGTTCATAACCGACCGCTGTTCATCACCGACCGCTGTTCATCACCGACCGCTGTTCATCACCGACCGCTGTTCATCACCGACCGCTGTTCATCACCGACCGCTGTTCATCACCGACCGCTGTTCATCACCGACCGCTGATCATCACCGACCGCTGTTCATCACCGACCGCTGTTCATAACCGACCGCTGTTCATCACCGACCGCTGTTCATCACCGACCGCTGTTCATCACCGACCGCTGTTCATAACCGACCGCTGTTCATCACCGACCGCTGTTCATCACCGACCGCTGTTCATCACCGACCGCTGTTCATCACCGACCGCTGTTCATCACCGACCGCTGTTCATCACCGACCGCTGTTCATCACCGACCGCTGATCATCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22186
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000065278 Essential Splice Site 156 755 5 15
Genomic Location (Zv9):
Chromosome 12 (position 50600187)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 48967031
GRCz11 12 48988560
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGCTGGACTTTGAGACGTCACGGACACATTTCATCACTGTGGTGGCAAAG[G/A]TGAAGCCCTGAGCATCCAGCGCTCATGTGGATCTTCAACAAAAGTGTTTA
Long Flanking Sequence:
GATAAACTTTTTATCCGATAAGAAAAGATGCACACAAACTGCGATGGAAACACTTTTACTGCACAAACTCCAGCAAGCGCATTAAAAAGGTGATGTGATCTTGTGATGAGAGATCATGTGATGATAAAAATGTGTGTGAATGGATAACCCATCAGGCTGAGCACACTGTAACATCTGAAATGTTGGTTTGGTCATTATAAAACGCCTCACTGTTTGACCTCCAGAGTCAAGAGCGTCCGCCTTCAAATGGACCTGTTTAACTCTGGACAGAAGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTATACTCCTCTTCATGCGTGTCTCTGGTCTGCAGTCGTCTCCTGATGGTCTGTTCAGCATTGACGGTCACAGTGGTGTTCTGCGGGTCAGGGAGCGGCTGGACTTTGAGACGTCACGGACACATTTCATCACTGTGGTGGCAAAG[G/A]TGAAGCCCTGAGCATCCAGCGCTCATGTGGATCTTCAACAAAAGTGTTTACACCCATAAATGTTTTGTTATCAGCTTAACTGAGACCATTGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCAGGACGGAGGCGGTAAATATCATGGTAAATACCAGGTGTTGAGCTCCACCGCTGTCATTACCATACATGTGCAGGACGTCCAGGATTCTCCTCCAGTGTTTGTTGGCACTCCATATTTTGGGTTTGTCTATGAAGTCTCTGTCCCGGTAAGCATCTCTCTATTCCACTTCTAAAACACACAATAACTGAACTGATGCAGTGTCCTTCAGTTTGTGTACTAGAAAGGGTTATGCAACCCCAAATCAGCAGCAGTAGGACAAAGCCAAATCAAAGTTTAAAGTGGAGATTTCTAAATTTCCTTTGACTTTTGATTGAGCCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18079
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000065278 Nonsense 203 755 7 15
Genomic Location (Zv9):
Chromosome 12 (position 50599406)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 48966250
GRCz11 12 48987779
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTCAYGAGGTGCAGAAACTGAGCTCTSCTSATGGTTTTGTGTCCAGGGTT[C/A]AGAGATTTTTACTGTTTTTGCGAAGGATGGAGMCCAGAGCAGCCCCAACC
Long Flanking Sequence:
TTGTTGGCACTCCATATTTTGGGTTTGTCTATGAAGTCTCTGTCCCGGTAAGCATCTCTCTATTCCACTTCTAAAACACACAATAACTGAACTGATGCAGTGTCCTTCAGTTTGTGTACTAGAAAGGGTTATGCAACCCCAAATCAGCAGCAGTAGGACAAAGCCAAATCAAAGTTTAAAGTGGAGATTTCTAAATTTCCTTTGACTTTTGATTGAGCCTGAACACAAAATATCTGATGTTTGGTCTGCTCAACTTCTTTTCATTTGGAAATATTCATCCTCTCCTGTCATTCAGACCTGCGACACACTCCAGACAATACACAGTCAAAATACATTTGGAAGTCACTACTGTCTCCTTTATTGTGTTTCCATGCTGTCCCGACTGCTGCTGGTTTGGGGTTGTAGATAAATGAGCGTGAACTGCTGCATTAATGAATCAGGCAATGAATATTCATGAGGTGCAGAAACTGAGCTCTGCTGATGGTTTTGTGTCCAGGGTT[C/A]AGAGATTTTTACTGTTTTTGCGAAGGATGGAGACCAGAGCAGCCCCAACCCTATTCATTACTCCATCCTGAACGGTGAGAAACTGTAACTCCACATGTGCACATCTGCACCGGCCAGATCCTTCAGTTATAAACACAGTGACCGAGCGCTTCAGTCTGCTCGTCTGCGCTTCAGTCTGCTATGAACAATAGCGAGAGCTCGGTTCTCAGACGCTCCGCTTAGCAGATTAGCTCTCACACCCGTTGCAATTCCCCTACTGTTGTTGTAAATTTTTCCTCTTCCCTTCTTCTTCTTCCTCCTCTTCCTCTACCTCCTCATCTTCCTCTACCTTTTCCATGTCCTCCTCCACTTCTTCTTCCTCCTCTTCTTTTTATTTTTTCTCTTTCTCCTTCTCTTCTTCTTCTTCTTCCCAAAGGCAGTGACGGCTTCTTCAGCATCAACAGCTCCAGCGGCTGCATCAGTCTGGTCTCGTTTCCTGTTCAGCTGAGGAATGAGTTGTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22185
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000065278 Essential Splice Site 330 755 9 15
Genomic Location (Zv9):
Chromosome 12 (position 50597134)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 48963978
GRCz11 12 48985507
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGGAGAAATCCTGCGCGGACTAAAGATCACTGTCAACGACTCCGACCAG[G/A]TGAAGGGCACTGAACACTAAACAGTGGACACTAGACAGTGAACACTAAAC
Long Flanking Sequence:
AGTACAGTACAGGGATCAGAATATCAGTACAGTACAGTAATAAGAATATCAGTACAGTACAGTGATCAGAATATCAGTACAGTACAGGGATCAGAATATCGGTACAGTACAGTAATAAGAATATCAGTACAGTACAGGGATCAGAATATCGGTACAGTACAGTGATCAGAATATCAGTACAGTACAGTAATAAGAATATCAGTACAGTACAGTGATCAGAATATCGGTACAGTACAGTGATCAGAATATCGGTATAGTGGAGACGTGTGTGATGCTCCTTCTGTGCTGTACTCCAGGCTGCAGAGGTCGGAGCTGATGGAGTGCTTGCAGACTCCTCCATCACCACCGTCACCATTCGGGTGGTGGATCTGAACAATCATCCACCCACATTCTACGGAGAAAGCGGCCAGCAGAACCACTTCGACATCAGCATGTATGAACACCCGGCAGAAGGAGAAATCCTGCGCGGACTAAAGATCACTGTCAACGACTCCGACCAG[G/A]TGAAGGGCACTGAACACTAAACAGTGGACACTAGACAGTGAACACTAAACACTGAACACTAAACAGTGGACACTAGACAGTGAACACTAAACATTGAACACTAAACAGTGGACACTAGATAATGAACAGTAAACAGTAGACACTTAACAGTTAACACTTAACACTAAACAGTGACCACTTAACAGTGGACCCAAGATAGTGAACACTAAACAGTGGACACTAGACAGTGAACACTGAACACTAAACAGTGGACACTGAACAGTTAACACTGACCACTAAACAGTGGACACTGAACAGTGAACGGGACAGCAGCATTTCCTCCAGCGCTGTGCAGACTGAAGCAGCAGGTGAACTGGAGACAGCAGCTCTGTTTCAGCTGTGGATCCTTCAGTCCTGCTTAAGAAAACGATCTTAATGTTTCAATGTTGAAGATTCACAAAGTCCTTCTAACCCTACACACAGCACACACACTAGCTGCGTCCCAAATTGCATACTTATGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22184
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000065278 Nonsense 583 755 14 15
Genomic Location (Zv9):
Chromosome 12 (position 50593857)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 48960701
GRCz11 12 48982230
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCACGGGCGAGATCAAGCTCAAACCCTACATCAAGAGTCTGGAGATCGTG[C/T]AGAACATCAGTAGGCAGAGGGAGTGCCGCTGGTCCGTGGTGGTGCAGGCC
Long Flanking Sequence:
GAGTCTGATCTTCTGCTCTGCTTCAGGTTCCTCATCCATCCCTCGTCCGGCATCATCTACACGCAGCCCTGGGCCGCTTTAGATGCCGAAGTCAAGTCCAAATATAATTTCTATGTAAAAGCTGAAGACACCGAGGGCAAGTACAGCCTGGCGGAGGTTTTCGTGACAGTTCTCGACCAAAACGACCATCCGCCAGAGTTCAACGAGAACTTCCTGGAGAAGACGATGATCATCGGCGCTCCGGTGAAAATACAGGTGAGTTATTTTACAGGCTGATGTTCTGTGCGCCGCCATCTGTCCCTGCGGCAGATTAGAGCGATGATACATCTGTGGTTATGTGAATACCCGACTGTGTTCAGGCGGTGGACGAGGACGCAGAGGAGCCCAATAACCTGATCGAGTACTCCATCATGAAAGCAGATCCAGACAACATCTTCGACATCAACACGTCCACGGGCGAGATCAAGCTCAAACCCTACATCAAGAGTCTGGAGATCGTG[C/T]AGAACATCAGTAGGCAGAGGGAGTGCCGCTGGTCCGTGGTGGTGCAGGCCCGAGACCGCGGATCTCCATCCTTCAGCACCACTGCGGTCGTGAAGATCGACATCACGGAGGCGGTGAGCGCTAATCACACGCTAACACACATTCACCACTGCGAACACAGCCGCTCTGATTATGAGAGAGAATGAGCATCTAGATGGACACGGTATTACCAGTGGAAGAACAGCGGCTGTATTTCAGCGCTTCAGTTGTTGTTGTTGACCTTTACTCTAGCCGTGAGTAACATATGCACACGTCATCATCATCATGCTCTATATTCTCCTCACGCATGCACGTTTACTGTCACGATCATGATCGTTCACAGAAGTCATAGGAGAGCGTGGAATAACAGCAGTGTTGAAGAGCTCAGGAATATACTGTGCTGCTGTACTGCGCACATTACTGCAACAAACAACACAGTCCAGCGCGGACAAGAGTGCTCAGAGCAACCATTGCCATCTGTC
Associated Phenotype:
Not determined