ZMP
arid4a
Ensembl ID:
ZFIN ID:
Description:
AT-rich interactive domain-containing protein 4A [Source:RefSeq peptide;Acc:NP_001026838]
Human Orthologue:
ARID4A
Human Description:
AT rich interactive domain 4A (RBP1-like) [Source:HGNC Symbol;Acc:9885]
Mouse Orthologue:
Arid4a
Mouse Description:
AT rich interactive domain 4A (RBP1-like) Gene [Source:MGI Symbol;Acc:MGI:2444354]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa45596 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa15044 | Essential Splice Site | Available for shipment | Available now |
| sa23011 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa45596
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000064412 | Essential Splice Site | 118 | 1196 | 6 | 21 |
| ENSDART00000103228 | Essential Splice Site | 118 | 671 | 6 | 18 |
| ENSDART00000121564 | Essential Splice Site | 118 | 663 | 6 | 20 |
| ENSDART00000128291 | Essential Splice Site | 118 | 1332 | 5 | 24 |
Genomic Location (Zv9):
Chromosome 17 (position 11277128)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 11259650 |
| GRCz11 | 17 | 11413716 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGAACTTCACTTTGTCTTAAAGGCGAAAGACATTTTGCAGAGAGTGAGG[T/C]AAATGAGAACATAAATACATTTACTGTGAGGTGTTGTGCCCGGATCATGT
Long Flanking Sequence:
GCATTAAACTGGTTAGAGTTGACATAAAATAAATTATTATGTGTAGTTATGATGGTATTAACTTATAAAAGCATTTAGCACTTTCTACATTCTATAAATCCGATGTGTATGTTTTTTTTTTCCTTTTATAAACAATTACAATTTTTATGCATGATATGAAAGGTGAGGTTGTGCAAACATAATTATTTTTCTCATCTGTGGTCTTAGGTTGGCTCAACAGTAGAAGTAAAGAGCCCAGAGGGTGGGCTTAGTGAAGCTGTCATCAGCAAACTCACAGATGCCAGCTGGTACACTGTAGGTACGTACAGGCAGGACTGGACCAATCTCACTGGAGTTGATCTTCCAAGACCATCATTATGCCCTATATGAATTGAATGAATGGTAGTAAGCTAAACTTGCCATTTGCATTCTCATTGCAGTTTTTGATGACGGAGATGAGAAAACCCTTAGAAGAACTTCACTTTGTCTTAAAGGCGAAAGACATTTTGCAGAGAGTGAGG[T/C]AAATGAGAACATAAATACATTTACTGTGAGGTGTTGTGCCCGGATCATGTGTCTTGTGGTTAGCTCTTTTTTTTTTTCCCCTCTTTCTTTTTCATAATTCTGCCTGTTTTGCTTTATTACAGACTTTGGACCAGCTGCCCTTGACTAACCCAGAGCACTTTGGTACACCAGTCATTGGAAAAAAGACGAATCGAGGTAGAAGGTCCTCTCAGGCAGTGTGAGTATTTTTAGTCTTTTTCTTTGTTGCCTCTTGCACTAAATGGTTCAAACTTGTTTTTAAGTTTTCCACATCTTTTGTATCCTTTTTCAAATCCAAATGTTTTTGTCATAGGGATGCAACGATTGTAGATTTTGGTTGTAGGGTTATAGTCTGTGGAACGGTTTCACGGTTATCATGAATATTATGCTTTCATTATTTTCAAAACAATACAATAATTGATCAAATCAAGTGAAAACCCCTTATATTTTAAAATGTTATTTATTGCTGCTCAGTAACCAGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15044
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000064412 | Essential Splice Site | 753 | 1196 | 20 | 21 |
| ENSDART00000103228 | None | None | 671 | None | 18 |
| ENSDART00000121564 | None | None | 663 | None | 20 |
| ENSDART00000128291 | Essential Splice Site | 753 | 1332 | 19 | 24 |
Genomic Location (Zv9):
Chromosome 17 (position 11257040)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 11239562 |
| GRCz11 | 17 | 11393628 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CGAACAAGRAGAACTTCCGGGATGTATGATTCTGATAGAGGATCTAATGG[T/A]AMGAGCTGCTTGCATCAGAAWRGCACTAATAAAAATCCAAGCACCATCAA
Long Flanking Sequence:
TTTAGAGTTGGCGTGGGAGTGAAGGTCAGTCAAACAACAGGTTACTGTAAGGGGTAAGCGTAGACATTAATAAAACACATTAGGTTGAACAAACGCAAACTAAATGTCTCGTAATGGTTCATAATATTGATCAATTTATCGAATTGTGTATTTGCAGTATTTATTTAGTAAATACTGTACATGTAATTTGTGGACATTTTTGAGATGGATCATTTAATAATACAAACCTGGGCCTGCAGCTGCATGCATCTCCTAATTTCAGCTTTTGGAGTCTCTTCTAATGTTCTGATGAGTTGATTCAGGTGTGTTTAATTAGGAAGAGTTTAAAATGGGAAAATTGAACCTTTTAGTTCAAGGGTTGTTTTGCCAGTATGAATTGTATTTGTTTAGTGATCTTGGCTTGTGGTTTTACTAACTCTTTGAAATCTTTGGACAGGCACTCCTCGACGACGAACAAGAAGAACTTCCGGGATGTATGATTCTGATAGAGGATCTAATGG[T/A]ACGAGCTGCTTGCATCAGAATGGCACTAATAAAAATCCAAGCACCATCAAGCTGTCTGTATCTGAAGATTTTTTTTTTTCTGAAAGGAAAAGCCAACTCTAATATAAAAAGTTGATGAGTTCTAAAGCAGTACGCAAATGCTGATTCTGTCATGAAAATGTCTTGCATAATTTTTCAGTGCAAGTTCTTTTCCGACCCCTATTTGAATAATCTACTCTGATCTATTGATTGTTTTTAAATTGTTGGCTCAGAAAGCACGTCAATAGCAGTTATAAGATATTAACAGATTTTTGTTTTTTGATCTTTATAAAATGACCTTGAATTTGCAGTGTTTTAGTATAGGTATGGGCACTGACCACACTTATAAGTGCATTTCTGTAATTTTGAAGTCTTGTGCACTATTCATGTAGATTATTGCAGACAGCACTGCAAAAGCTAGCAGCACCATCTAGTGGCTGTATCTCTTGAGCCCACAGTATATTTGTGGCCGTTTCTGATCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23011
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000064412 | Nonsense | 1006 | 1196 | 21 | 21 |
| ENSDART00000103228 | None | None | 671 | None | 18 |
| ENSDART00000121564 | None | None | 663 | None | 20 |
| ENSDART00000128291 | Nonsense | 1006 | 1332 | 20 | 24 |
Genomic Location (Zv9):
Chromosome 17 (position 11255672)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 11238194 |
| GRCz11 | 17 | 11392260 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGATGCCTTCTCTTACCAGAGAGGTGCACCTCAAGTTAGAAGCTCCTTG[T/A]CCAGACCTGGAGGATCCAACAACAGTGGCAAACGAGGAAATGATGCCTCA
Long Flanking Sequence:
CCAAAAATGACAGCGAAGAAGCCTCGTTTAAAAGAACCAGGATCAGAGACTCCCACGCAAACACCCGCCGCTGCTAATCACCACGCAGAGACAGAGGAACCTTCCACTCCACCACGACCTGTGAAGAAATCACAGGAAACGCCACACAGCAGTCCTGTAGAGAGAATAAAGCTGGTGGAGACGGCTGGCTCAGACACGGACTCTGCAACAGAGGACATCGACCCTCCAGAGCGAACCAGTGCAGCGAAACGCAAAATCAATGAACAGCGAACGCCGGAAAAGAAAATTCGCTTGGACAGAAAAGAAGAACCTAAAACACCTTCTCCTGTTAAAACATCACCACTAGAAAAGAAACCCGAGTCAGAAAAGAGGACTGAGATTGTGCAGAAACCTGAGGAACCACCCAATCCAACGCTGTCATCTCCCAGCAAAGAGGTAGAGATTAAGTCTGAGATGCCTTCTCTTACCAGAGAGGTGCACCTCAAGTTAGAAGCTCCTTG[T/A]CCAGACCTGGAGGATCCAACAACAGTGGCAAACGAGGAAATGATGCCTCAAATTGGCCCTGAGGCGCTGGTCTGCCATGAAGTAGATCTAGACGATCCAGAGGAGAAGGACAAGCCCTCTAGTGAAGAGTTGCCGATAATGAAGGAAGAGAAAGTTCTGCCTCAGCCTCTGGAGTCTCCTGACCACCTTCATGTCCTACCAGCAGTGGGACCACCGCGTCTGTTTTCCCCATCCTCTGCCCCCAGCCCAGATGAATCTCATAGCACTAAGAGCGAGAGCGATGCTACCATTGAAGTGGACAGTGTGGCAGAATCACAAGAGGGTCTCGGAGAGAATGAATCGACTCATAGCTTTGATGCTAGTGCTAGTTCGAGTAATTCCAGCATCTCACTCCAGGATCGAGATGGAAAGGACAGAGGTAAGTTAAAGCTTGGTGCTTGTTTTGTTGATTTTAGTTTACGACTCTTAATCAGGGTTCCCAAGCTTCTTGAAAGTACTTT
Associated Phenotype:
Not determined