Busch Lab

ZMP

cops4

Ensembl ID:
ENSDARG00000043732
ZFIN ID:
ZDB-GENE-030131-4317
Description:
COP9 signalosome complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6P0H6]
Human Orthologue:
COPS4
Human Description:
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) [Source:HGNC Symbol;Acc:16702]
Mouse Orthologue:
Cops4
Mouse Description:
COP9 (constitutive photomorphogenic) homolog, subunit 4 (Arabidopsis thaliana) Gene [Source:MGI Symb

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa215 Nonsense Available for shipment Available now
sa27571 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa215
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000064215 Nonsense 184 406 5 10
Genomic Location (Zv9):
Chromosome 10 (position 11326169)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 11402035
GRCz11 10 11360273
KASP Assay ID:
554-0119.1 (used for ordering genotyping assays)
KASP Sequence:
ACATCAACCGAGCGTCKTTATTGCAGAATGAATCCACCAATGAACAGTTG[C/T]AGATTCACTACAAGGTGATCTTTCAGCTCTRTCTTTTTATAATATGCTAT
Long Flanking Sequence:
AGGATGTTTTCTTATGGCCCGTTTCCACTGAGGGGTATGCTAAGGGACACCTTTATCAGGCTTGCGTTTCCACTGCCAAAAGGGTACCAATGGTACCTTTTTGGTATGTGTGGTGTACGACAGAAAGTTACAGTCGACGTCTCACTCTTTCAGGTGGCATCCATCAGACAGCATTTAGCCACAATCTATGAGAAGCAGGAGGACTGGAGGAACGCTGCACAGGTTCTTGTGGGGATCCCACTGGAGACGGGTCAAAAGTAAGCTTGCTTTTCTCTTGGATTAAACCAATGCAGCCAACATGTCGCCCAGTACTGCTGGTCGTGAGTTTGGATTTTCTAATCATGTTTTTCTGCTTCTACAGACAGTATAATGTGGACTACAAATTAGACACTTACCTGAAAATTGCTCGTCTGTATTTGGAGGATGACGACCCGGTTCAGGCCGAGGCCTACATCAACCGAGCGTCTTTATTGCAGAATGAATCCACCAATGAACAGTTG[C/T]AGATTCACTACAAGGTGATCTTTCAGCTCTGTCTTTTTATAATATGCTATGTATACTGTACTGCCGGGCAGTAGTTCCAAAATAGACATTTCTGATTTTGGTGTGACTTTTTTGTGAAACAATTTATTTGAGCAGTTGCTTTTCTGAGTTCTGTTCAAATTTTTTATGTGCGTTATACAGTATTTATTGTGATAAGTCTTATTACCATTTACAGTTATAAATAATTCTTTATTTTTTGCATCCTTTCAACATATAATATACAACTTCATGTATTTTTAATGTGTTTTTATTTAATAAAAATATGTAAATATGAATGTAGTAATACAAATATAAGTTTGTTCATATTTATGACTGGATGTAGTTTTGGGGTTTTACTAATACACAAAGAAAACGGTCAATTTGTTTCATTTTTGCCATTGCATTCTGTGTTTATATACAGTTGAAGTCAGAATTATTAGCCCCCCTGTTTATTTTTTCCCCAATTTCTGTTTTAACAGAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa27571
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000064215 Nonsense 271 406 7 10
Genomic Location (Zv9):
Chromosome 10 (position 11328199)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 11404065
GRCz11 10 11362303
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GATGTCAGCAGCTCGCCGCCTACGGCATCCTAGAGAAAATGTACCTGGAT[C/T]GAATCATCCGAGGAAACCAACTGCAAGAGTTTGCTGCCATGCTGATGCCA
Long Flanking Sequence:
GAACTGTGAATGGAGATGTTTCGCAAATGTAGTGTAAACACCAGTATAAACGAGGATCATTTTCAGAAAAGAAAAACAAAACAAAACAAAACACTGTGTTAAATCAAGTGACTAGTAAAAACCAGTGTAAAGAATCTGTTTGGATTGCCTAATTAGTTTTTAGAGCTAGTAGACCCAAAAATAAAAACTTCCACACTATTTGCTCAACTCAAATTTCACACAAAACAAGATATTCTGACATTTATAGTAGGAACAGAAAAAACAAAACTATAAAAGTCAATGGCAGTTGTTTCCAACATTCTTCCCTTGTGTTCAACAGAAGAAAGAATCTCAAACAGGTTTGAAGGATGATTAAATGATGACAGATTGTTCAGTTTTGAGTGAAACTATTAATGTGTTCTTAAGGTCAGCAGCGCTCTCGTATGTTGGCTACTCTCTTCAAGGATGAACGATGTCAGCAGCTCGCCGCCTACGGCATCCTAGAGAAAATGTACCTGGAT[C/T]GAATCATCCGAGGAAACCAACTGCAAGAGTTTGCTGCCATGCTGATGCCACATCAGAAAGCCACCACAGCCGATGGTATTAGATATTACTCCTTAGCCATGGTGTAACTTGGAAGTGGGGGCACACAAAATGGAGGAACAGGTTTTCGATTTAAATGTCATTTCCAGCATTTACATACATATAGAAACTGTGTTGATGCATAATACATGAGAAAATTAGGTTAAGCTAATTTTGTTAAACTAAAAATAAATAAAAAATATGGACTATTTGTGCTTGATCACTATTTTGTAATATTAATTGCATATACAGTTGAAGTCAGAATTATTAGCCCCCCTTTGATTTTTTTTTTCTTTTTTAAATATTTCCTAAATGATGTTTAACAGAGCAAGAAAAATGTCTGATAATATATATATATATATATTTTTTCTGGAGAAAGTCTTATTTGTTTTATTTAATCTAGAATAAAAGCAGTTTTAATTTTTTTAAACCTATTTTAAGGA
Associated Phenotype:
Not determined