ZMP
gle1l
Ensembl ID:
ZFIN ID:
Description:
Nucleoporin GLE1 [Source:UniProtKB/Swiss-Prot;Acc:Q6DRB1]
Human Orthologue:
GLE1
Human Description:
GLE1 RNA export mediator homolog (yeast) [Source:HGNC Symbol;Acc:4315]
Mouse Orthologues:
AC161416.1, Gle1
Mouse Description:
GLE1 RNA export mediator (yeast) Gene [Source:MGI Symbol;Acc:MGI:1921662]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa34278 | Nonsense | Mutation detected in F1 DNA | Not yet available |
e51 | Nonsense | Confirmed mutation in F2 line | Not yet available |
sa34279 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa6090 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa34278
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000101137 | Nonsense | 335 | 696 | 8 | 15 |
ENSDART00000128227 | Nonsense | 333 | 717 | 7 | 16 |
ENSDART00000129569 | Nonsense | 333 | 694 | 7 | 14 |
The following transcripts of ENSDARG00000043559 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 8 (position 2735743)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 8 | 2502132 |
GRCz11 | 8 | 2560675 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCTTTTGCAGGATCAGTTTCCCAGCGTGGAGGATTTGAGTGTGGCGGAG[C/T]GAGCTCTACAGGAAATGAGGTCATTGGTCCGAAGCCTGCAGGAAGCAGTT
Long Flanking Sequence:
GGAGAGCAGTTCAGAAACGCTGGGTAAAACGCAAGTGTGGACGCGGATCGTTTTCATTCTAAAACGCCGTTTTAAAACTAAAACGCACTAGTGTAAACGGGGCCTAAGTAAAGTCTATGTGTGGGAAGCACTGATCTATGGTCACTTTATTTAGAACTTCTGGGCAAAAGTTTTATTAAAAATGTAGAAATATTAAATAAATTTTAATGGAATTTTAAGTACTTTTCAGGAACTTTGTGATTACAGGCACAACATAAAACATTGCTTAATAAAAAGTAAACATTTGAGCTCATTTTAGCTCATCGTCCAAATGTTGTTACCGTATTACCATAAACATAACAGGACACCGCAAAATAAACAGTATGAAATGATAATATGAAAAAATGCTTTAAAAAGTAATTTTAAGTTGAGGCACACACCAGATGCATGAATGTGAAATGTGAATTGCCTTTCTTTTGCAGGATCAGTTTCCCAGCGTGGAGGATTTGAGTGTGGCGGAG[C/T]GAGCTCTACAGGAAATGAGGTCATTGGTCCGAAGCCTGCAGGAAGCAGTTTCGCAGGCTGCTGAGAGGAAGAAGAAGAAAGAACAGGAGGAAGAGGAGGAGAAGAGGAGGCAGGAGCAGCTGAAAGCCCAGCAAGAGGAGCAGAAGAAGAGCGCTGCACTGTCGGCTAAAGAAAAAGCCAAAAAAGAGGGTGAGCGAGCAAGTTAATGCTTGTAAAAATGCTTTTCAAACCTTGCTTGCTTTCTTATTTGGACAGCAAAAGATCTATTTTTTTACTATTATTTACAATTACAAGACCTTTTATTTTAATATTTTTACAAGATGTGAAAAAAAAGTCTCTGATGTCCCTAGAGTGTGTACCTGAAGTTCAAAATACCCCACAAATATTGTTTTCAAACTCTCTAAAACTGACCCTTTTAGACTTTGATCTTAATTGTGGCGTTTTGGTGACTGTCGCTGTAAATTCAAATGAGATTGTGCTCTTCGAAACATGACTATCGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
e51
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000101137 | Nonsense | 400 | 696 | 9 | 15 |
ENSDART00000128227 | Nonsense | 398 | 717 | 8 | 16 |
ENSDART00000129569 | Nonsense | 398 | 694 | 8 | 14 |
The following transcripts of ENSDARG00000043559 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 8 (position 2739639)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 8 | 2506028 |
GRCz11 | 8 | 2564571 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGTTTTACCTGACTTAAACAAGTGCTTTTTGCATTATTTACACAGGTCTG[C/T]AGACTGGAGCGGATGACAGCACTTTAAAGTGGTACAACAGCCTGCAGGAT
Long Flanking Sequence:
CAGGGTGGCATGGCGCACCCTTATAGATAGGATGAGGAGCTCTGACACCCAGGAGGAGCTCAGAGTAGAGCCGCTGCTCCTCCACATCGAGAGAAGTCAGCTGAGGTGGCTCGGGCATCTGTTTCGAATGCCTCCTGGATGCCTACCTTGGGAGGTGTTCCAGGCATGTTCCACTGGAAGGAGGCCTCGGAGAAGACCCAGGACACGCTCGAGGGACTATGTCTCTCGGCTGGCCTGGGAACGCCTCAGGATGTCCCCCGAGGAGCTGGAGGAAGTGTCTGGGGTGAGGGAGGTCTGGGGTTCTCTCCTAAGACTGCTGCCTCCACGACCCGTTCCCAGAAAAGCGGATGAGATGAGATAATAAGTGCACCTCAGAGAAGAATACAAAACAATATAAACTGAATTACAGTTCATGATCTCTTCAAAATGTTTTTAATGTGAAATGATCAACGTTTTACCTGACTTAAACAAGTGCTTTTTGCATTATTTACACAGGTCTG[C/T]AGACTGGAGCGGATGACAGCACTTTAAAGTGGTACAACAGCCTGCAGGATTTGGCCAATCAATGCGCTCAGGCTTTCGATGACCTCAATAAAGCCAAAGACACACAGGTGGAACAACCATTGCATTTTAATGGATATCCTATCAATGCGTTTGTACTGAATAATTACACTATAAAATGATTAGTTGACTTAAAGTGAGGAAACCCGTTGCCCTAAACTATTTTAACGTAATGAACCATGTGCATAACTCTAAAAATAAAATTAAATCAACTTTACAGTTACAAGTTACAATGGGTTTACTTACTTTTTAAGGTTTTATTTTATTGTTTTACTTTTTACAGTGCATGTTCTCAATTTTCGTGTGTTATGAATGTGTGCAGACAAAAAAAATTAAAATGGAGCTCCAAAAGGCTGCAACCACACCTGTGAGTCAGATCGCCAACAGCTCAGGTGAGACAGATGTGGAAAAACAGCTGCATGAAGTGGTGATGTGCTAAAATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34279
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000101137 | Essential Splice Site | 613 | 696 | None | 15 |
ENSDART00000128227 | Essential Splice Site | 611 | 717 | None | 16 |
ENSDART00000129569 | Essential Splice Site | 611 | 694 | None | 14 |
The following transcripts of ENSDARG00000043559 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 8 (position 2744926)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 8 | 2511315 |
GRCz11 | 8 | 2569858 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTATGCTGCAATAATCCAGATGAGATGGCCATACTCCAGCAAACAAGGGG[T/A]GTGTGGTGCTTCTGTCCATTAATATCACAATAATCAATATATCGATTGAT
Long Flanking Sequence:
ATTTACAGGTATCATTCACCTAAAAATGATAATTGAGTTTGTTCCAAACCTGTTTGAGTAAAAAACATTTCTTCATTGTTCATGTACGTACAGATATAGCCTCAGATACACAATAGCAAAAAGCAATGGAAAAGCGCATAGAAAAATACATAAATACAGGGAATCTGATCATATCAGGCAGTAGACTAAGGTGTATGATGACTTTTTAATACCAAGAACTGAGACTTTCAATTCAAACAAGACGGCATTGTTACCTGTTCTCATGCATTTCAGAAAATGAGTAAATACACAATTGTATATAATTCATATGGATATAACATTTAGGCCTAAATATGTGTAAATCACTATAAATGTACTTTTGCCCATCAGGATCCTTGGATATCGTGTAGATGAGGGGAAAGTGGAAGGACAGGACAGCTTTCTAAAGAGAATGTCGGGAATGATTCGCCTTTATGCTGCAATAATCCAGATGAGATGGCCATACTCCAGCAAACAAGGGG[T/A]GTGTGGTGCTTCTGTCCATTAATATCACAATAATCAATATATCGATTGATCATGCAATACTCAGAGATGACCTCAAATCATGTTTGCCATTGCAATATAGATTTACAAATTCACAAATAACATTAAAGCCATTTTACAGTGACACCAGTGAGGTAGTCATAACTTCAATAACGGGGTCCTGGAGGGCCGGTGTCCTGCATACTTTAGTTTCAACCCCAATTAAACACACCTGAACCAGTTAATCAAGCTCTTTCTAGGTATACTAAAACTTCCAGGCAGGTTTGTTGAAGGAAAGTGGAGCTAAACTATGTAGGAGACCGGCCCTCAAGGACCAAGTTTGGACACCCCTTCTTTATAATCATGACAATGCGAATGAGTTTTTATACATGCTTTTGACACTTAATAACAGTTGTCGTAAGCATGAATAAGGTCTCATTCACATTCACGATGTGTTTCATGAATCATGATCATAAAGGTTTAATGTCAGACCCCTTCAAGTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6090
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000101137 | Nonsense | 657 | 696 | 15 | 15 |
ENSDART00000128227 | Nonsense | 655 | 717 | 14 | 16 |
ENSDART00000129569 | Nonsense | 655 | 694 | 14 | 14 |
The following transcripts of ENSDARG00000043559 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 8 (position 2746496)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 8 | 2512885 |
GRCz11 | 8 | 2571428 |
KASP Assay ID:
554-3848.1 (used for ordering genotyping assays)
KASP Sequence:
TATTTTTGTCATGTGTGTCTCTTTAGGTCTGTGGAAATGCCCTAATGAAA[C/T]AATATCGCGTCCAGTTCTGGAAACTGATATTGATTATTAATGAAGAATAY
Long Flanking Sequence:
TCAACACATTTTTACATTTCAACCCACAACTCATCTCTAATAACTGATTTATTTTATCTTTGCCATGATGACCGTAAATAATATTTGACTAGATATTCTTCAAGACACTTCTATACAGCTTAAAGTGACATTTAAAGGCTTCACTAGGTTAATTAGGCAGGTTAGGGTAATTAGGCAAGTTATTGTATAACGATGGTTTGTTCTGTAGACTATTGAAAAAATATATAGCTTAAAGGGGCTAACAATTTTGTCCTTAAAATGGTGTTAAAAAAATGTATAACTGCTTATATTCTAGCCGAAATAAAACAAATAAGACTTTCTCTAGAAGAAAAAATATTATTAGACATACTGTGAAAATTTCCTTGCTCTGTTAAACATCATTTTGGAAATATTTAAAATAAATCTGACTTCAACTGTAAATAAAATGTAGAGAGAGTGAGAAAATAACTGTATTTTTGTCATGTGTGTCTCTTTAGGTCTGTGGAAATGCCCTAATGAAA[C/T]AATATCGCGTCCAGTTCTGGAAACTGATATTGATTATTAATGAAGAATATTTCCCGAGGTATTTATGCTTTGCTTCCATATTACACTTTACATGCATTCACTGGGTTCACAATATAGAATAAACGTCGGCGCCAATAGCCTAGTGGTTAGTGCGTCGACACATAGCTCTGAGGTGCTCGCAGCGACCCGAGTTTGATTCCCGTCTCGAGGTCCTTTGCTGATCCTTCCCCTAACTCTGCTCCTTACACTTTCCTGTCTCTATATCTCCACTGTCCTATCAATAAAGGTGAAAACCCCTAAAAAATAATTACAAAAAATAAAGAATATAGAATAAACCATTTATAATCTGAAAAAGAAATGAGCATAAACAACTGATATGAAGTGATTTTATGCAATTTATCTATTTGTTTACAGTATTTTATAGCGATGTAACGGTATCAGAATTTCACGGCACGGTTATACCTTGTTATGAAAGGCATGGTAGGGTATTTATTGAATAA
Associated Phenotype:
Not determined