gapdh

Ensembl ID:

ENSDARG00000043457

ZFIN ID:

ZDB-GENE-030115-1

Description:

Glyceraldehyde-3-phosphate dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q5XJ10]

Human Orthologue:

GAPDH

Human Description:

glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:4141]

Mouse Orthologues:

AC127324.1, AC142104.1, AC147142.1, AC157595.1, Gapdh, Gm10290, Gm10291, Gm10293, Gm10313, Gm10327, Gm10358, Gm10359, Gm10481, Gm10566, Gm12033, Gm2574, Gm2606, Gm3200, Gm3222, Gm3272, Gm3839, Gm4609, Gm4795, Gm5069, Gm5138, Gm5507, Gm5559, Gm6316, Gm6498, Gm6981, Gm7251, Gm7293, Gm7627, Gm7713, Gm8055, Gm9034

Mouse Descriptions:

Glyceraldehyde-3-phosphate dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:P16858]
glyceraldehyde-3-phosphate dehydrogenase Gene [Source:MGI Symbol;Acc:MGI:95640]
predicted gene 10358 Pseudogene [Source:MGI Symbol;Acc:MGI:3708786]
predicted gene 10359 Pseudogene [Source:MGI Symbol;Acc:MGI:3708724]
predicted gene 10481 Pseudogene [Source:MGI Symbol;Acc:MGI:3708707]
predicted gene 10566 Pseudogene [Source:MGI Symbol;Acc:MGI:3642220]
predicted gene 12033 Gene [Source:MGI Symbol;Acc:MGI:3650772]
predicted gene 4609 Pseudogene [Source:MGI Symbol;Acc:MGI:3782792]
predicted gene 5138 Pseudogene [Source:MGI Symbol;Acc:MGI:3779464]
predicted gene 5507 Pseudogene [Source:MGI Symbol;Acc:MGI:3648656]
predicted gene 5559 Pseudogene [Source:MGI Symbol;Acc:MGI:3779498]
predicted gene 6498 Pseudogene [Source:MGI Symbol;Acc:MGI:3647773]
predicted gene 7293 Pseudogene [Source:MGI Symbol;Acc:MGI:3779717]
predicted gene 7627 Pseudogene [Source:MGI Symbol;Acc:MGI:3643954]
predicted gene 7713 Pseudogene [Source:MGI Symbol;Acc:MGI:3644622]
predicted pseudogene 10290 Pseudogene [Source:MGI Symbol;Acc:MGI:3642597]
predicted pseudogene 10291 Pseudogene [Source:MGI Symbol;Acc:MGI:3641638]
predicted pseudogene 10293 Pseudogene [Source:MGI Symbol;Acc:MGI:3704216]
predicted pseudogene 10313 Pseudogene [Source:MGI Symbol;Acc:MGI:3642852]
predicted pseudogene 10327 Pseudogene [Source:MGI Symbol;Acc:MGI:3704356]
predicted pseudogene 2574 Pseudogene [Source:MGI Symbol;Acc:MGI:3780741]
predicted pseudogene 2606 Pseudogene [Source:MGI Symbol;Acc:MGI:3780774]
predicted pseudogene 3200 Pseudogene [Source:MGI Symbol;Acc:MGI:3781379]
predicted pseudogene 3222 Pseudogene [Source:MGI Symbol;Acc:MGI:3781401]
predicted pseudogene 3272 Pseudogene [Source:MGI Symbol;Acc:MGI:3781450]
predicted pseudogene 3839 Pseudogene [Source:MGI Symbol;Acc:MGI:3782011]
predicted pseudogene 4795 Pseudogene [Source:MGI Symbol;Acc:MGI:3646519]
predicted pseudogene 5069 Pseudogene [Source:MGI Symbol;Acc:MGI:3644516]
predicted pseudogene 6316 Pseudogene [Source:MGI Symbol;Acc:MGI:3646088]
predicted pseudogene 6981 Pseudogene [Source:MGI Symbol;Acc:MGI:3646966]
predicted pseudogene 7251 Pseudogene [Source:MGI Symbol;Acc:MGI:3646144]
predicted pseudogene 8055 Pseudogene [Source:MGI Symbol;Acc:MGI:3643695]
predicted pseudogene 9034 Pseudogene [Source:MGI Symbol;Acc:MGI:3643526]

Allele Name	Consequence	Status	Availability
sa6419	Nonsense	Mutation detected in F1 DNA	Not yet available
sa42694	Nonsense	Mutation detected in F1 DNA	Not yet available

Allele Name:

sa6419

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000063800	Nonsense	92	333	5	12
ENSDART00000135146	None	None	53	None	4
ENSDART00000139939	Nonsense	92	240	5	9
ENSDART00000147739	Nonsense	92	224	5	8

Genomic Location (Zv9):

Chromosome 16 (position 19256654)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	16	17286977
GRCz11	16	17194954

KASP Assay ID:

554-5098.1 (used for ordering genotyping assays)

KASP Sequence:

AACAGGAGGGACCCAGCCAAYATTAAGTGGGGTGATGCAGGTGCTACTTA[T/A]GTTGTGGAGTCTACTGGTGTCTTCACTACTATTGAGAAGGCTTCTGTACG

Long Flanking Sequence:

TTAATGTGAGATGAAAGCAAGTGTTTATGAATGAGCTTTTATTTTTTTCAGATTCGGTCGCATTGGCCGTCTGGTGACCCGTGCTGCTTTCTTGACCAAGAAAGTGGAGATTGTGGCCATCAATGACCCATTCATTGACCTTGATTACATGGCAAGTTCCTTTTTTAAAAATTTTTTTTTAACTAGTTTTGGGGTTATTTTGAATATATTTATAGTGCTTGTTTCTTCACAGGTTTACATGTTCCAGTACGACTCCACCCATGGAAAGTACAAGGGTGAGGTTAAGGCAGAAGGCGGCAAACTGGTCATTGATGGTCATGCAATCACAGTCTATAGCGAGTGAGTGCTGTTATTCCAAACTATGCATGGTTTTTTTTATTATTATTATTATTATTATTATTATTATGATTATTTTTGCAAGCATTGGGCTATGCTCATGATCTCTGCCTAAACAGGAGGGACCCAGCCAATATTAAGTGGGGTGATGCAGGTGCTACTTA[T/A]GTTGTGGAGTCTACTGGTGTCTTCACTACTATTGAGAAGGCTTCTGTACGTAATCATGGATGTTACATAAGCTGCCTGCAACAAAAATTGTTTTTCTGTAACTGAAATTTTGCTCTCCTGGTAGGCTCACATTAAGGGTGGTGCAAAGAGAGTCATCATCTCTGCCCCAAGTGCAGATGCCCCCATGTTTGTCATGGGTGTCAACCATGAGAAATATGACAACTCTCTCACAGTTGTAAGGTAAATGGTGTTTTTATTATTATTATTATTTATTTATTTATTTTTTAAGTATTTGCTTGTTTGAAAAATTATTCATTTTTGATAATGGATAAAGCACCTAAATAAATTTGGCTAAAGCTTTTAGAAGTACTTGTAGAAAGACATGTACTATATCCATATTTTTAGTTAAACTAAGTTGGTTTGGTGTCTAAATGCAGTCATGATTTATCCAGTAGGGGGTGTAATAAAGAAATATTTATCTAAAGGCATGTTAAATGTAA

Associated Phenotype:

Not determined

Allele Name:

sa42694

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000063800	Nonsense	170	333	7	12
ENSDART00000135146	None	None	53	None	4
ENSDART00000139939	Nonsense	170	240	7	9
ENSDART00000147739	Nonsense	170	224	7	8

Genomic Location (Zv9):

Chromosome 16 (position 19256033)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	16	17286356
GRCz11	16	17194333

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ACTGCCTGGCTCCTTTGGCAAAGGTCATTAATGATAACTTTGTCATCGTT[G/T]AAGGTCTTATGGTAAGATTAAATGGCCTTTCCAATCTCCTCTAAAAGCCT

Long Flanking Sequence:

GTAGGCTCACATTAAGGGTGGTGCAAAGAGAGTCATCATCTCTGCCCCAAGTGCAGATGCCCCCATGTTTGTCATGGGTGTCAACCATGAGAAATATGACAACTCTCTCACAGTTGTAAGGTAAATGGTGTTTTTATTATTATTATTATTTATTTATTTATTTTTTAAGTATTTGCTTGTTTGAAAAATTATTCATTTTTGATAATGGATAAAGCACCTAAATAAATTTGGCTAAAGCTTTTAGAAGTACTTGTAGAAAGACATGTACTATATCCATATTTTTAGTTAAACTAAGTTGGTTTGGTGTCTAAATGCAGTCATGATTTATCCAGTAGGGGGTGTAATAAAGAAATATTTATCTAAAGGCATGTTAAATGTAATGTCTGCATTTATAGTATCGTTTGTGACATTATTTTATTTATTCTCCCAGCAATGCCTCCTGCACCACCAACTGCCTGGCTCCTTTGGCAAAGGTCATTAATGATAACTTTGTCATCGTT[G/T]AAGGTCTTATGGTAAGATTAAATGGCCTTTCCAATCTCCTCTAAAAGCCTTTTGACCCTAAAGTGATTGAGACCTGCTGTGATGCACCACTTTATTTAAGCCCTGCACTGGACTATGCTTTTTAAAGCAATTAAATGTGGAAGTCACGATTTATACAAATTTTTCAAGAACGTCCTGGTTTTCCATTTCAGAGCACTGTTCATGCCATCACAGCAACACAGAAGACCGTTGATGGGCCCTCTGGGAAGCTGTGGAGGGATGGCCGTGGTGCCAGTCAGAACATCATCCCAGCCTCCACTGGGGCTGCCAAGGCTGTAGGCAAAGTAATTCCTGAGCTCAATGGGTCAGTTTTACCTCATCTTTTGACATTTGAGTGTCAGTCTAATTTAAAACCTCTGCTATGAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAGTATTGTGTAGTTTTTAAAGTTTGATTTGTCTTAACTTATGATTTA

Associated Phenotype:

Not determined

ZMP

Alleles

Mutation Details

Mutation Details