ZMP

tssc1

Ensembl ID:

ENSDARG00000043417

ZFIN ID:

ZDB-GENE-041010-167

Description:

Protein TSSC1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XJP1]

Human Orthologue:

TSSC1

Human Description:

tumor suppressing subtransferable candidate 1 [Source:HGNC Symbol;Acc:12383]

Mouse Orthologue:

Tssc1

Mouse Description:

tumor suppressing subtransferable candidate 1 Gene [Source:MGI Symbol;Acc:MGI:1289332]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa43014	Nonsense	Mutation detected in F1 DNA	Not yet available
sa8669	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa43014

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000063738	Nonsense	184	387	6	10

Genomic Location (Zv9):

Chromosome 17 (position 51815208)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	17	51200954
GRCz11	17	51289989

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TTGATTTTCCTCCTCAGATCTCGAGCAGCGCCACCCTGGAGGGTAAAGGA[C/T]AGCTGAAGTTCACCGCGGGCAAGTGGAGTCCACATCACAACTGCACACAG

Long Flanking Sequence:

CACACACACACACACACTTGTATACACACTCGTACAGCTCTCCCATCCACAAAACACACACACACAAACATATGTACACACACTCAAGAAGCTCCCTCAACTGGACAACACACACACACACAAATACAGTACACACACTCATGAAGCTTTCCCATCCACACACACACACACATGCGATCGTGCTACCCACTGCGCCACCGTGACACCCCAATGTGTCGCAAATGTTGCAGCTTTGTACAATATAGATAGTGTGAAGGCAGCTTAACAGCTTGAGTTCTGATGAATTGAAACTGCTGGCGTGGAACAAATCAATTGACGAAAGTGAAGGGGAAACGAAAACAGAGAGCATTGAATGTTTGCACTGAAGCCGCAGCATAATGAATGTGCTGCCATTGATTCAGATGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGGATTGATTTTCCTCCTCAGATCTCGAGCAGCGCCACCCTGGAGGGTAAAGGA[C/T]AGCTGAAGTTCACCGCGGGCAAGTGGAGTCCACATCACAACTGCACACAGCTGGCCACTGCCAACGACACGGCCATCCGAGGCTGGGACCTGCGCAGCATGAGGTGAGAGATCTCCAGACGGAGAGCCTCCTCTGGAAATATCACAAACTCTTACCGTACGTTCACACCGAAAGCGGCGAGAGCGTCCAAGGTCGCTCTGGCCGCCCTGGCGACAACTCTCTCTGCCTTCAGCTCCGGCGGCGAGAGCGGCAAAACTCGCTACATTGATCTCGTACTTAAAGGAGCCGTTGCAGCATATCAGTTACATTCCTGCATAAGACATGTTTTTAGCGTGAAAATGTTGCGCACTTCTTATCAAATTCATATAACAATGGAAGATCAAGTTGCGTGTGGTGTGGCTTTGCTCTATTTATCCAATATGTGTCCATATGTCTGAAATATCCTGAAGCAGCAGTACTGTTTTGTACTGTCAAATCGCGGAAGATTCCCGCTTTTTAAA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa8669

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000063738	Nonsense	382	387	9	10

Genomic Location (Zv9):

Chromosome 17 (position 51830711)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	17	51216457
GRCz11	17	51305492

KASP Assay ID:

2261-1632.1 (used for ordering genotyping assays)

KASP Sequence:

CGCTCAGCTACGACGGSCGGCTGGTGATCAACAGAGTCCCACGAGCACTT[A/T]AATACCGCATTTTACTGTAGAGCAGGTGAGCGGATCAATGAACCGAAACA

Long Flanking Sequence:

ATTATCTGTCAGTCTCACAACATGATGTAACTACAGAAGAGTTGAGCTTTAAATAGGAAAACTTTCAAAACTCTTTCGAATTTGTTTGAGTGAGATGCTAATGGTCTAACCCGATTCAGTGATCTATGCTAAGCTAAGCTAAAAGTGTCCCCACCAGAACCAAAGATTGTTTAAATGAATTTAAAAAATGGCTAAACACAACTGTTTACTCCAGGGGAACTAAAGAATTGGAGTGATTTCTTAACTTGCAGTACATTTGAGCTCTCTAGGTCACCTTATAACATAAGTCAGACATATTGATTGTAATAGACTTTGAATTGATTGCTGATGTGTGTGTTGTGTGAAGGGGGAAGGAGCCATTGCAAGATAGCATCATCTCCACATATGAGGAGCACGAGGACAGTGTGTATGCCGTGGAGTGGTCCGCTGCAGACCCCTGGCTCTTCGCCTCGCTCAGCTACGACGGGCGGCTGGTGATCAACAGAGTCCCACGAGCACTT[A/T]AATACCGCATTTTACTGTAGAGCAGGTGAGCGGATCAATGAACCGAAACAACACAGATGCTGTCAATCAGGGGCGGTTCTAGACTCTTTTATTTGGTTGGCTATAGTCCTGTTTGTCTTTTCAGATAAAAATAAATAAATTCTGAACAATTACTCAGTGAGGTAACTGATCATTTCGTCACACAAATACACTACTGATAGAAGTCTTGTTGCTGAACGATTCATATGGGAGTCGCTGGGATAATTGGATAAAAATAAATGCATATAAGAACATGAAAGTGTTTTTTTTTTGCGTGCATATCAGTATGTTGTTGGGAGACCCATATAACCGAAATATGACCCTTTGTCATGTATAATACGAGCTCTTTAAGGTCAGTTTTTTTTGACTGCCCTCTATCTAATTAAAGGGTCACAAAACACCAAAACACATGTGTTGAGCTGTTGACAGTCGTATATGTGTCCCACACTGCTAAAAACACTATTAGGACACCTATATTTCAC

Associated Phenotype:

Not determined