ZMP
si:dkey-12h9.9
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate calpain 3, (P94) (CAPN3) [Source:UniProtKB/TrEMBL;Acc:Q5SNR7]
Human Orthologue:
CAPN3
Human Description:
calpain 3, (p94) [Source:HGNC Symbol;Acc:1480]
Mouse Orthologue:
Capn3
Mouse Description:
calpain 3 Gene [Source:MGI Symbol;Acc:MGI:107437]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa15564 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa15564
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000063177 | Essential Splice Site | 202 | 533 | 4 | 12 |
| ENSDART00000136518 | Essential Splice Site | 202 | 719 | 4 | 20 |
Genomic Location (Zv9):
Chromosome 20 (position 26023593)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 26094896 |
| GRCz11 | 20 | 25993986 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGACAGAATAATGAATTTTGGAGTGCTCTCATGGAAAAGGCATATGCAAA[G/A]TAAGTTCATTTATTACAATATTTGGCATCAATAACGCTATACTGTGTCAC
Long Flanking Sequence:
CCCACACACATCCAGAAAACCAATTGCTCCCTCTTTTCATCTTATACTATATGCAATATCATTTGTTTATTAAAAATGTATATATTCAGTATGTGTTGTCATAAAGCATGTGGAAAAACCTTTAATGGCCCATTAACATCTGCAGGAGACTGTTGGCTGTTGGCTGCCATAGCTTGCCTGACCCTGAATGATGTCATCCTGAAGAGGGTTGTTCCTCATGACCAAAGCTTCACTGAAAACTATGCTGGCATTTTCCATTTCCAGGTATATGGGCATCAAAACTGTCATGCATTTCATATTTGACACATGAACCCTACACTTGGATGAATGAAGCACAAGCACAAGCACAATTTTGAATGTTTCTAGTTTTGGCGCTATGGTGAGTGGGTGGATGTGGTTATTGACGATCGACTTCCCACATACAAAAACAAGCTGGTCTTTACCAGGTCTGGACAGAATAATGAATTTTGGAGTGCTCTCATGGAAAAGGCATATGCAAA[G/A]TAAGTTCATTTATTACAATATTTGGCATCAATAACGCTATACTGTGTCACTGTCAACTTATGTTCATTCATGCTCTGAATTAAATATATCACAATTAATCCAAGGTGTTGATGTGTCGGTTTGACTTCCGGTTCCCAGGTTACATGGCTCTTATGAAGCCTTAAAGGGAGGGAACTCATTGGAGGCTATGGAGGACTTCACTGGAGGTGTAACTGAGTTCTATGAGATTACAGAAGCCCCGAAAGAGTTGTACAACATCATGAGGAAGGCTCTGAAGAGAGGATCCCTCATGGGCTGTGCCATAGACGTACGTTTCGCTTCCTTTATTAAAATATAATAGGAATAAAAAAGATATGTTGCTTCTCTGTCAAAAAAGTGCAATGTTTTAAAATTATTATTATTCCACACTTTGTCTTTGATGCTTTCGTGCTTTTAGACAGACTCTCTGTCTGTGCATTACCAATGGACATTTTTCAGTCAGCCTTCCTCTTTGATCCACT
Associated Phenotype:
Not determined