Busch Lab

ZMP

nr2c2

Ensembl ID:
ENSDARG00000042477
ZFIN ID:
ZDB-GENE-080403-8
Description:
nuclear receptor subfamily 2 group C member 2 [Source:RefSeq peptide;Acc:NP_001116766]
Human Orthologue:
NR2C2
Human Description:
nuclear receptor subfamily 2, group C, member 2 [Source:HGNC Symbol;Acc:7972]
Mouse Orthologue:
Nr2c2
Mouse Description:
nuclear receptor subfamily 2, group C, member 2 Gene [Source:MGI Symbol;Acc:MGI:1352466]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa34524 Nonsense Mutation detected in F1 DNA Not yet available
sa12029 Essential Splice Site Available for shipment Available now
sa14160 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa34524
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011597 Nonsense 105 623 3 14
ENSDART00000125232 Nonsense 105 623 4 15

The following genes are also affected by this mutation:

Genomic Location (Zv9):
Chromosome 8 (position 55380201)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 53247602
GRCz11 8 53126181
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCCAGCGGGTAAAGTCCTGCTGGCGTCCCCAGAGAGCTCCAGCGCCAAA[C/T]AGCTCATCTTCGCCACTGCCGACAGCCTGGTACCCGGCAGAATACAGGTA
Long Flanking Sequence:
AGTACACACCCACAACCACAAACATATATACACACAGACACACAAACACATGTGCACACTACCACACACACACACACACGCACACACAACCAAACATATTTGCACCCAGACACACAAACATGCACACAAAATATATATATATACATATACAATATACATACACACACACACACACACATACACAAAACCAAACACACATGCCATGAACACAATTACACACTCACACACATACACACACATGCACGCATACAAACACATATATTCAGACACAGAGATTCTCACATTCACACAAAACCAAACACACACTCCTCATCAGCGCTGTCTGGTTCACACATGATCCTCCTCTTCAGATCGTCACAGAGCAGCAGACGGGGCAGAAGATCCAGATAGTGACGGCTCTGGACTCCTCTGTGCCCAAGCAGCAGTTCCTCCTGGCCTCTCCTGATGGCTCTCCAGCGGGTAAAGTCCTGCTGGCGTCCCCAGAGAGCTCCAGCGCCAAA[C/T]AGCTCATCTTCGCCACTGCCGACAGCCTGGTACCCGGCAGAATACAGGTATGAAGAACACACACACACACACACACACACATGTACAATTCTGGGATGTACGTTATCTCTTACTTATTATATCGGTCAGAGTTTCTTGTTCACCTGTGAACTACTAGACCATCATCATCATCATCATCATCATCATCATCATCTTTATATAGCTGTGCTGTATTAATGCTGAATAAGAAATGCTTCTGCCTTCTGCTGTAGTTTGTGACTGATGCCGTGTCCGTGGAGAGGCTTCTGGGTAAAGGCACAGACCTCAGCCGAGTTCAGCCAATTGAATACTGTGTGGTGTGTGGAGATAAAGCCTCAGGTACAAACGCATTCAGTCTTACAAATGTGATTTTCTTTTTATACATGGAAGAAAGCATATTAAATGCAAATGTGTTGAAATATGGGTGAAATAATGCTCCATTGTCATTCAGTGTAATGTATGTTTATTTAAGAGTGAAGCAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12029
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011597 Essential Splice Site 215 623 5 14
ENSDART00000125232 Essential Splice Site 215 623 6 15

The following genes are also affected by this mutation:

Genomic Location (Zv9):
Chromosome 8 (position 55378459)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 53249344
GRCz11 8 53127923
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCAGTTCTGCCGGCTCCGCAAGTGCCTGGAGATGGGCATGAAGATGGAGT[G/A]TGAGTGACGCAGAAACAGCAGGGCTGGGGGGCGATGAATSCAATCGAGAA
Long Flanking Sequence:
ACAAGTTGTATTTTTACCATTTTTTTTACCCTTATCTGTTCCGGGACTTGACAATTCACAAATTAAGCACTGGCAGTAAGTGAGACCAGAAGTGTCCAGTCAATAAGGCTGAACCACTCATATGTGAAAGAATCAGGTCTCTGTGGGAAAATAGTAGTTTTTGAACTGCATTAAAATTGCATTACATCAAACAGACGAAATAATGTTCTTGTTTTCTTTAGCAATGTCATATGACCCCTTTTAAATAGAAGTATTAAACTGAACTTCATTCATTCACTGGTCTCATCTCTCTGTGTGTGTGTGTGTGTGTGTGTTTGTAGGGAGGCATTATGGAGCTGTGAGCTGTGAGGGCTGTAAGGGTTTCTTCAAGCGGAGCGTGCGCAAGAGTCTGACCTACAGCTGCAGGAGTAACCAGGACTGTGTGATCAACAAACACCACCGCAACCGCTGCCAGTTCTGCCGGCTCCGCAAGTGCCTGGAGATGGGCATGAAGATGGAGT[G/A]TGAGTGACGCAGAAACAGCAGGGCTGGGGGGCGATGAATGCAATCGAGAAATTATTCTGCATCCGTTTTGAAGTTTTGCACTGCAATATATATACAGAATTATTCACCCTCCTGTGTTTTTTATTGAACAGATTCAGGAATTTTTCACAGTATTTCCTATAATATTTGTTCTTCTGGAGAAAGTCTTAGTTGTTTTATTTCGGCTAGAATAAAAGTAGTTTTTTATTTGTTTTAAAGCCATTTTAAGGTTAATATTATTAGCCCCATTAAGCAATATTAGTGTTGGATTGTCTCCAGAACAAACCACTGTTATACAATGACTTGCCTAATGAACCTAATTAACCTAGTTAAGCCTTTAAATGTCACTTTAAGCTGAATAGTGTTGCACAAAAATGACCTATATTTAATATAAAAAGTTATTTTTGGACTGGATATATTGGATTTATGTATAAATAGATATAATATTAGATATAACACTGGCTCTGATGCATTTTGTGCAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14160
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000011597 Nonsense 545 623 13 14
ENSDART00000125232 Nonsense 545 623 14 15
Genomic Location (Zv9):
Chromosome 8 (position 55368164)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 53259639
GRCz11 8 53138218
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTTCWCCAGATCATCCAGGTTTGAGTAGCTGCAGCCAGATTGAAAAGTTT[C/T]AGGAGAAAGCGCAGATGGAGCTCCAGGACTATGTGCAGAAGACCTATCCR
Long Flanking Sequence:
TTACGCAGCGGATGCCCTTCCAGATGGGAAACATCCACACACACACTCATACACTACGGACAATTTAGCCTACCCAATTCCCCTGTACCGCATGTGTTTGGACTGTGGGAGAAACCGGAGCATCCGGAGGAAACCCACGCGAACGCAGGGAGAACATGCAAACTCCACACAGAAATGCCAACTGAGCCGAGGTTCGAACAGGCGACCTTCTTGCTGTGAGGCGACAGCACTACCTACTGCACCACTGCCCTGCCCTAGTGCTCATTCAGTTTTTGGTAGTTTGATGCAGAGATGATCTAATACACACATAAATACATATAAATATTTTAGAATTTTAAAAATAAATCTTAATATTAAAAACTATCAAGGATTTAAGATGCTGAGGATTGTTAAACGCATCATAACGCATGGTCTTGTGAAAAGGGTCCTGAACTCACAGCTGCTCCGTTTCTTCTCCAGATCATCCAGGTTTGAGTAGCTGCAGCCAGATTGAAAAGTTT[C/T]AGGAGAAAGCGCAGATGGAGCTCCAGGACTATGTGCAGAAGACCTATCCGGATGAAACCTACAGGTCAGCTCCATGTTGATATCAGACTATGGAGAAATGCATCTTATAGCTCTGATATAATCACTACTATTGAGATAAGAACAGTGGCGTAGCGCAAAATGCGGAGGCCCCCCTGCAGGGATCGCTGACGGGGCCCCCTGATGATGGGGGTGGGGGGGGGATACGTCATACGTCAATTTGCATATCACTGACGTCATCACGTTCTACCGTTTCTGTTTGTTTAACAGCATATGGTTAATAAAGGGGTATTTATAATTGCACTACACTTTATTTAAGCATGTTTATTTAACTTAATGTATTGCTGTTTGAATACAGTATGTCATTATAGATGTGTAGTGAATGTGCAGTAATCTCTCATATGTAATAAACTCAGACAAGTTCAGAAACTGTCACTAAAATATCTGTGATTGTGAACAAGAAAAGAATAAACGGTCCAATT
Associated Phenotype:
Not determined