Busch Lab

ZMP

smek1

Ensembl ID:
ENSDARG00000042187
ZFIN ID:
ZDB-GENE-030131-3958
Description:
Serine/threonine-protein phosphatase 4 regulatory subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5SP90]
Human Orthologue:
SMEK1
Human Description:
SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:HGNC Symbol;Acc:20219]
Mouse Orthologue:
Smek1
Mouse Description:
SMEK homolog 1, suppressor of mek1 (Dictyostelium) Gene [Source:MGI Symbol;Acc:MGI:1915984]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
hu7878 Essential Splice Site Available for shipment Available now
sa32303 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
hu7878
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000061843 Essential Splice Site 488 818 9 15

The following transcripts of ENSDARG00000042187 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 20 (position 33514626)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 33572866
GRCz11 20 33475745
KASP Assay ID:
554-2384.1 (used for ordering genotyping assays)
KASP Sequence:
CTCTCCGCTCCACTTCTTGCCAACACCACTGAAGAAAAACCCAGCAAAGG[T/C]AATAACTTTTACTATCTTTTTGAGCATGTGTGTGTATGTGTACGCTTGTA
Long Flanking Sequence:
GGGAAAAAGACAAACAATGGAGACGATGAAAAAGGATTTGGAGAGTCAGTTTACAACTGTTTGATGTTATTCATTTGTGATCAAATTGAGAAAAGTGCTTCTCTGCCAGGTTTAAAGTGCTTATTCTATGGAATATTGTGCTTTGTTCCCTCTTTATTATTGCTGAATTTAAAGGGATCTGCTTTTACCAAGTTGTTTTATTTGTAATATTTTTAATCAGATAATTTAGCAATTTTAATTTAACATTACATTTTAAATTTAATACATTTCTATATCTAATTAATTGTTCAGATGTTCTGAACAAAGTTGTTTCTTGTCATATCACCCAGCTTTTTTGTTCTTTGTCAGATTGTAGAGAAACATTCTCTTTTTATTGAATTGTCTGGTTCCTTGCAGAAAACTGAGAAGACCGAGTTTTTGAGCTTCTTCTATAAGCATTGCATGCATGTGCTCTCCGCTCCACTTCTTGCCAACACCACTGAAGAAAAACCCAGCAAAGG[T/C]AATAACTTTTACTATCTTTTTGAGCATGTGTGTGTATGTGTACGCTTGTAGGATGCATGCAGGGTGAAAGTTTTGGCAGCTTTGTTTTGAAGCGTTCGTGTGACTATTTGCATACATATTAAAAAATGTAAGCTTTACAGACTTTTCACTGTGTTTGTTTGTCTTGTCAGATGATTTCCAGACATGTCAGCTGCTGGCTCTGATCGTAGAGCTGCTCACTTTCTGCGTGGAGCATCACACGTATCACATAAAGAACTACATCATCAACAAAGACATCCTGCGCAGAGTGCTGGTGCTCACTGCATCACAACATGCTTTCCTAGCCTTATGTGAGTAAATTCTCACTGCACAAATGATACCAATTTTATAATGAGCTAAAGCTTTATGATATCACATTTGAAATGAAAATATTCTGCAGAAAATATTGTATTTCCACTTGCTGTTGTCGGTTGCGAAGATGAGCTTTTGCTTTTTTTGCTTTGCTTAACACTATAGCAGTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32303
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000061843 Nonsense 678 818 13 15

The following transcripts of ENSDARG00000042187 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 20 (position 33510031)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 33568271
GRCz11 20 33471150
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CACTGGAAGACGAGGAGGAGATGTGGTTTAATACGGATGAGGAAGACTTA[G/T]AGGATGGTGAAGCAGTTGTGCCTCCGTCGGACAAGATGAAGAATGACGAG
Long Flanking Sequence:
TTTTTTTCTTTCTTTTATTATTCAATATTTCTCCACGTACCTCTAGATGAAAGTACCACAGTTTAAGAACCACTGCTTTAGTTTTAATAGGGCTATAAAATCAGTATCTTGTTTTATAGAGGAAAAAATATTTTCATACAAAACATTTTTTTTAAGTGTAAAATGTATTCTTTATGAAATACAAACTTAAAATAATTTGATAAAATAAAAAGTAAACTGTATAGGAAGTTTTCCCCCTCTGTTTTAAGAACAACTGTGAAACTATTGAAGTCAATATTTAAAAGGAGATTGCATCTTTGTCACCTTTTTTCTTTTTTGGAATTTGAGCTGCTATGATTTTATTGGTATCAAATGGTGTCATTCCATTATGTTTTTTTTCCCCTGTCGTCTTGATTATTTTCAGTATGCGGTCGATTCTGAGAAATCACCGTTTTCGCCGGGATGCACGGACACTGGAAGACGAGGAGGAGATGTGGTTTAATACGGATGAGGAAGACTTA[G/T]AGGATGGTGAAGCAGTTGTGCCTCCGTCGGACAAGATGAAGAATGACGAGGACCTTATGGATCCCATCAGCAAATTTATGGAGAGGAAAAAATGTATGTTACTGCTACTTACAGGATGGTGTGATGATCAGCTAGTATTGTCCTCCACTTGATTGCAAGATAATATTATGTAATGTGTGTTGTTTGTTTGATTGATAACTTTTTTGTACTTTCTCCTTCACTTTCCACAAGTGAAAGATTCAGAAGAGAAGGAGGTGTTGACAGGGAAAGCAAGTCTCTCAGGACGGCAAAGTCCCAGTTTTAAACTGTCCTTCTCCAGCTCGCCAAAGGCAAGCCTGTCCTCTCCGCCGACTGCATCCCTTCATCCCGGTTCACCTGGTTCTCCTAGCTCTCCCGGGACAGGGGCCCGGAGCTCTCCCCCTTCGGCAGCTGTCACCACTAAGGTATTTAACAAGAATTGAAAGTGCTTTAAAATTCTAGTTGTTTCCTTTTTTACTATT
Associated Phenotype:
Not determined