ZMP

elp3

Ensembl ID:

ENSDARG00000042005

ZFIN ID:

ZDB-GENE-050327-35

Description:

Elongator complex protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5RIC0]

Human Orthologue:

ELP3

Human Description:

elongation protein 3 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:20696]

Mouse Orthologue:

Elp3

Mouse Description:

elongation protein 3 homolog (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:1921445]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa9618	Essential Splice Site	Available for shipment	Available now
sa29409	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa9618

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000061557	Essential Splice Site	8	548	None	15
ENSDART00000138226	Essential Splice Site	None	528	None	15

Genomic Location (Zv9):

Chromosome 20 (position 34696155)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	20	34768668
GRCz11	20	34671547

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

CTGGAGTGTTTGTAGATTKTGTMWAAGATGGGAAAGCCAAAAAAGAAGAG[T/A]AAGTATTATTTGCTCATTTTTANCATGGCGTATTCTGTTACGTTGCTGCTG

Long Flanking Sequence:

TTGATTTGGTTGTGTCATTATAACAATGTGTGCTTGTATATATCCCAATAAAATGTTTGTATGTTTACAAATATTAATTTTCAATTTAATAAATATTTTATAATCAAAATGTGTATTTTTTTAATTAATATACTTTTTGTTGTTTTTAATTATTTAATTTTATATGTATTATTTTATTTCTTTGGTTTATACAATGATTTTTTTATGAATGTTCTCACTATTCTTGAATGTCTCTACTATACACCTCATCTGAACACTAGAGGTGCTCAAGTATGTACTTCAGATCTGTGGTAAAGTGCTTGACAACTTTACGACAACAGTGCAGTGTTCCTTTACGACACACGTTTTCGTTTTACGGAAGAGTGTAGCATGTTAACAGATGTTGACAATATTATCTGCGAGTTCATGAAGTAAATAACTGCGCGTTTTAGTCTTTATCTGGTACGAGAGCTGGAGTGTTTGTAGATTGTGTCTAAGATGGGAAAGCCAAAAAAGAAGAG[T/A]AAGTATTATTTGCTCATTTTTACATGGCGTATTCTGTTACGTTGCTGCTGAAAGCATGTTGTAAAAACTAATCTTCCATCATATATTAACAGCTTTGTGTTTGATTTAATATTTAGGAGAATGTTACGTTATATAGTTACGATAAAAACTTGCTGATCTGGCAATGTTCGTCAATATTAAAATAACAGCTTGACAAAAAGTTGGAGGGATTAAATGCACATGTTTGCTTACTAAATGTACTTTTCTTATGGGTATGTTTTGTTGACGAGATATAAATGCAGAACTACCATGATTTTATTATAGTAAAACTGTAGTAAGCAGCCATGTGGTTATTGTGTAGCAAAGCCTTATTGGTTATTGTGATTTTTGGTTAGCCTACCATGAGATTACCAAACCTCAGTAGCCATGATTTTTTGGTTTATTTGCAGTAAAATTCTGGTTAGTTATCATCAACGTATAATAATGCTTGCTATTTTACTCCAAATAAGCAAGCCAAATGT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa29409

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000061557	Nonsense	367	548	10	15
ENSDART00000138226	Nonsense	352	528	10	15

Genomic Location (Zv9):

Chromosome 20 (position 34718904)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	20	34791417
GRCz11	20	34694296

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TAGCAAGAATACTAGCGCTGGTTCCACCATGGACTCGTGTGTATCGTGTA[C/T]AGAGGTAAGATGAATGTAATGATGCTGTTACTGCACATACAACCTCTCAT

Long Flanking Sequence:

TGACCAGAGATCAGATGTGACTGCAAAGTGGCGGCAGAAGTGGAAATTAGCCACAGTCTTTTAACAGAGTAGGCTCACGTGATTCCACACACGGTAGGGAAAGTAATTGAAAAAATCGTCCTAGAAGAATTCGATTATAGGTTCTGAAAGTCGACTTTGATTACCTTTCAATTACTTGCTCAGCCCTAGTGTTGCCTACAAATTTAGTGTTGAATGTGGATAAGAAAATAATATAATCATTATCGGTCATAGTTGGCTCTAAGTCTCATGTTTGCGCTGCTTTTTCAAACGTCATTTGTCTCTGTCTGCAGGAGTTTTTTGAGAACCCTGCCTTCAGGCCAGACGGGCTCAAGCTTTACCCTACACTGGTGATACGAGGCACTGGACTGTATGAGCTGTGGAAAACAGGCCGTTATAAGAGCTACTCTCCCAGTGCCTTGGTGGACTTGGTAGCAAGAATACTAGCGCTGGTTCCACCATGGACTCGTGTGTATCGTGTA[C/T]AGAGGTAAGATGAATGTAATGATGCTGTTACTGCACATACAACCTCTCATTGTATGCTCACAGATGAGTTTAGACCTACGTTTTTCTTGATCCAATCTCAAGTGGACCTGAAATGGGCTCTGAAGTGTTTTGAACTTGTCCACTTTCAGAGGTAGTCAAAAACACAACTGACTTTATTGATTTCACAGTATAGATGCTCAGGTAATAGAGAGTGTTCAATCAGCCACAAAACACTGTCCCATTCTTTGCCCACTGACTTTGACATCATGAACTTTAAGGAATGAATGTAGTGTTGAAGTGATGTAGCCAGACAAAATTTTAATGTGATTCCTTCATTTGTTAGTTTTAATTGGGGTTGGAACTAAAATATGCAAAACACCGGCCCTCCAGGACCGATTTTGGGCACCCATGTCCTAAACTCTGGGACCCGGTACTGGGTCCATGACATCATTTACTTCTGCATTCTTTAAATTTTAAAGGTCCGTACTGGCCCAATACTT

Associated Phenotype:

Not determined