Busch Lab

ZMP

nfya

Ensembl ID:
ENSDARG00000042004
ZFIN ID:
ZDB-GENE-010501-1
Description:
nuclear transcription factor Y, alpha [Source:RefSeq peptide;Acc:NP_001076264]
Human Orthologue:
NFYA
Human Description:
nuclear transcription factor Y, alpha [Source:HGNC Symbol;Acc:7804]
Mouse Orthologue:
Nfya
Mouse Description:
nuclear transcription factor-Y alpha Gene [Source:MGI Symbol;Acc:MGI:97316]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa10216 Nonsense Available for shipment Available now
sa15592 Nonsense Available for shipment Available now
sa2607 Nonsense F2 line generated Not yet available

Mutation Details

Allele Name:
sa10216
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099571 Nonsense 59 265 3 8
ENSDART00000103064 Nonsense 59 321 3 8
ENSDART00000122531 Nonsense 72 167 4 6
ENSDART00000125616 Nonsense 83 316 4 9
ENSDART00000140397 None None 218 None 6
Genomic Location (Zv9):
Chromosome 11 (position 37106509)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 36003737
GRCz11 11 36265720
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCATCACTTCCTCTGGGCAGCCCATAATGGTTCAGGCCATGACARGAGGA[C/T]AAGRTCAAACCATTATGCAAGTACCGGTATCTGGTACACAGGGGCTGCAG
Long Flanking Sequence:
ACCTTGTATCTCATGCATTGCTATCCTTATTTGTATTATTATTATTATTTTTTTATCTTTCTCAGTACTATTACAGTATTATGAATATCATTTGCTATGATTTTCAAAAAATATCCAAATAATTCCCACAGGAATGACTTTAAAGCATGCTTTTTTTTGTGCAAATTGCATTATCAAACCCCCAGCAAGTCCAGTGCCACCAACTTCTTGCATTTCACATGCACTGCATTTTCTTGCATGCATCTACGTTTTGCATCATCTCAGTGTCTATCATAATGTCATCATGAAATTAGCATTTAAAAGTTACTATTATTCTCATTATAACGTAAGTAATGGAAGCCTGAGAAGTCTAAGAAGTAAATTGTGTTTTAGTACTGACATTTTTTTTTCATGTATTTTCTTCAAAGGTCCAAGGGCAGCCTCTTATGGTTCAAGTCAGCGGCGGTCAGCTCATCACTTCCTCTGGGCAGCCCATAATGGTTCAGGCCATGACAGGAGGA[C/T]AAGGTCAAACCATTATGCAAGTACCGGTATCTGGTACACAGGGGCTGCAGCAGGTGAGTGAAGCTAATTTCAAATTCAGTTACTTGATAAAAATGCAGTATTTACTTTTTTTTTTTTACTTTATGCACTTTAATACTTCAAGGCAGTGTTGGGGGTAATACATTACAAATAACGCAAGTTATAAATAACGCAACCAATAAAGTATTACTTTTAAAAAATAAGTCATATTTGAGTTTTTTTTTTTTTTTTGAAAATGTAACATGGGTTACTTTTTAGTTTATGTATTGAGTTTTTAAAAAAATAAATTGCTGAATTAAAATGAAAGTAATCACGATGAATCACGTTGGATCAATGAGGGAATGTCTTTATTATTTTGAACACATTGAAGAAAAAGAAAATGGCATTGTCTTAATGGGCAGTGATTTTACTTAAGACAAATAGTACAAAAGTAGCAAACACATTGCATTACATTTTCATTAATCTGTATATATGGCATGTAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15592
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099571 Nonsense 79 265 4 8
ENSDART00000103064 Nonsense 79 321 4 8
ENSDART00000122531 Nonsense 92 167 5 6
ENSDART00000125616 Nonsense 103 316 5 9
ENSDART00000140397 None None 218 None 6
Genomic Location (Zv9):
Chromosome 11 (position 37104747)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 36001975
GRCz11 11 36263958
KASP Assay ID:
2260-4556.1 (used for ordering genotyping assays)
KASP Sequence:
NNNNTACTGGGGATGAAGTTATAATGAAAANCCTCTATGTTACACAGATTCAGT[T/A]GGTYCAGCCTGGTCAGATTSAGCTTCCTGGTGGACAGACTTTACAGCTAC
Long Flanking Sequence:
GACTAGGTTTAAACAGGCCCTAACAAACAACTTGACAGTCAGTCATTGTGAGCATGGAGTCACAAAAGTTAAGAACCCCTCAGTATAAAACTCCAGCAAGATACTGGGGATAGGTGGCACGGTGGCTTAGCGGTTAGCACACCTCACAGCAAGAAGGTCAATGGCTGAGTCCTCCCTGTGCCAGTTGGCATTTCTGTGTGGAGTTTGCATGTTCTCCCTCTGTTTGCTTGGGTTTCCTCCAGGTGCTCCGATTTCCCCCACAGTCCAAAGATGAGGTATAAGTGAATTGGATTCATTAAATTGGCCGTTGTTTGCATGAATGAGCGTGTATGGCTGTTTCCCAGTATGGGTTGCGGCTGGAAAGGCACCCACTGCATAAAAGATATGCTGGAATAGTTGGTGGTTCATTCTGCTGTGGACCAAGCTAAAGAAAAATGAATGAATGAATGATACTGGGGATGAAGTTATAATGAAAAACCTCTATGTTACACAGATTCAGT[T/A]GGTTCAGCCTGGTCAGATTCAGCTTCCTGGTGGACAGACTTTACAGCTACAGGGTCAGCAGGGTCAAACTCAACAGATCATCATTCAACAGCCACAGACCGCAGTCACTGCAGGACAAAACCAGGTATTGTACTTATGCAGATTTTTTAATTTTATCATAAATATGAAAGCACAACAATCTATTTAAATACCCATTATCAATGAAGTGCATAATAAATCCTGGTGCTTTCTGATTTTTTTAGGGTCAACAGCAGATTACAGTACAAGGTCAGCAAGTGGCTCAAACCGCTGAAGGACAGACCATCGTATACCAGCCTGTAAATGCAGACGGGACCATCCTACAGCAGGGTAAACCCAGAAAAACTAAATTAACAACGATAAAATGTGTTTATATCAGTCGATACTGATAATTATCTAGCTAAATTTTACATTTCTATTTCTTTTAAGTTTAAAGGGGATTTTTGCTGCTGAATGAATGTTTTAGAAAGCAGTCTGTTCAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa2607
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099571 Nonsense 239 265 7 8
ENSDART00000103064 Nonsense 239 321 7 8
ENSDART00000122531 None None 167 None 6
ENSDART00000125616 Nonsense 263 316 8 9
ENSDART00000140397 Nonsense 137 218 4 6
Genomic Location (Zv9):
Chromosome 11 (position 37101670)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 35998898
GRCz11 11 36260881
KASP Assay ID:
554-3133.1 (used for ordering genotyping assays)
KASP Sequence:
TTCCTGGAGCAGAGATGTTGGAGGAGGAACCTTTGTATGTTAATGCAAAA[C/T]AGTATCACCGGATACTCAAGAGGAGACAAGCTCGCGCCAAACTGGAGGCT
Long Flanking Sequence:
CTACCCTGATCCAGTTACTATGACCATTTATGTGAAGCTGCTTTGACACAATCTACATTTTAAAAGCGCTATACAAATAAAGCTGAATTGAATTGGATTGAATTGAATATATTGCTGATTAATTTTGTGATTGTTGTTTTTTCCCCATCCAGGAATGATCACCATTCCTGCTGCATCTTTAGCAGGAGCTCAGTTAGTCTCAGCTGGATCCAACACAAACACCACCAACACCGGTCAGGGCACAGTTACAGTCACTCTCCCCATGGCTGGAAACATGGTCAATGCTGGAGGAATGGTCATGGTGAGCTCATGTGGTCATTTTTTTCCATCCAACATGACTTCTGGCCATAAACATGTGCTTTTTTAACCTTAGTATGTGTGCGTGTTTGTAATTGAATCAGATGGTGCCAGGCGGTAGCAATTCAGTTCCCACCATGCAGCGCATTCCTCTTCCTGGAGCAGAGATGTTGGAGGAGGAACCTTTGTATGTTAATGCAAAA[C/T]AGTATCACCGGATACTCAAGAGGAGACAAGCTCGCGCCAAACTGGAGGCTGAAGGCAAAATACCCAAAGAGAGAAGAGTATGTGTGATTTTTTTTTTTACTGCGCTAACAATGACATTTCAGTCACTTAAGTATTATTTTTGCTCGCTTTATTAAATATATATTGTTAATTTATAGTTAATTCACATTTGACTGCGTTAAAATATCAGAATATATTTTTAATTAAATATATTTTCATTAAATATACTGTTATTGTCACATTTTGGCCAGTCGCATCTTTTTAAAAATAACATTTGCCGTTTTTAAAATTCTTTTAAAGCACAGGTGTCAAACTCAGTTCCTGGAGTGCCTCAGCTCTGTGCAGTTTAGTTTCAAGCCTAATTAAACACACCTGATCTAACTAAATAAATGCTTCAGGCTTGTTTGAAACGTTCAGGTTATGCTGCTGTCAAACCACAGTTGTGCATGTGAAATTCTGTTGTACGGCGCTGCGAAAAGGGG
Associated Phenotype:
Not determined