Busch Lab

ZMP

rrp9

Ensembl ID:
ENSDARG00000041991
ZFIN ID:
ZDB-GENE-060427-1
Description:
U3 small nucleolar RNA-interacting protein 2 [Source:RefSeq peptide;Acc:NP_001112367]
Human Orthologue:
RRP9
Human Description:
ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast) [Source:HGNC S
Mouse Orthologue:
Rrp9
Mouse Description:
RRP9, small subunit (SSU) processome component, homolog (yeast) Gene [Source:MGI Symbol;Acc:MGI:2384

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa41886 Nonsense Mutation detected in F1 DNA Not yet available
sa10382 Essential Splice Site Available for shipment Available now
sa21955 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa41886
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000065647 Nonsense 39 471 2 15
ENSDART00000135888 Nonsense 39 468 2 15
Genomic Location (Zv9):
Chromosome 11 (position 37070602)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 35967830
GRCz11 11 36229813
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAAGAGTAATACAGACGACGGCAAAGGGAGATCCAAAAGGTTCAGTAAA[C/T]GAATGAATGAAGAAATCTCGAGTGACTCAGAAAATGAAAGGTAATGTTGT
Long Flanking Sequence:
TAACTATGTATGCATGTGTATATTATTTAATGTATTACTAATTTTAAAACATGAGTTTCAGTCAGTCGTTTGAAGTGCGTCTGTAATGTCTGCTCTGTCCAGTGAGCAGCGCTGTATCTCAAACACACACGTGTAAACCAACCCAGAAGAAGAGCCTCCGGAAGCATGTGTTTGTGACCATGTGAGTGCCAGCAGAGAGCACTAAATAAACTCAAACATCCTCAAATTACTTCTAAAAATCAGTTAAGTAAAAACGCCATCATGTCGTCCTTCTTCATAAAGAAAAAACTCGTCTCTTCAGCAACGAATAAAGGAGATTTAAAACGAAAGGTACGTTTGAATTGAGCTAAATGAGACTTAAAAGTAGAGTTGTAGCGTTCATGATGTTATTTGATGCACATCTCTCTGATATTGTGTAATAATAACGTGTTTATGTTCATATTCGGCATGTCAAGAGTAATACAGACGACGGCAAAGGGAGATCCAAAAGGTTCAGTAAA[C/T]GAATGAATGAAGAAATCTCGAGTGACTCAGAAAATGAAAGGTAATGTTGTCTGAACTAACGTTACTGCAGTTTACAATAGAGGTAAGGTTGGTTTTATATTCGCACATCCGTTCATTAAGAAGTCTCTATATTGTTTACTATTTTACTTTGAATATTCGATGGGAATTAGCATGCATCTAGGACTTGAAAACAACATTAACTGGTCTTCCTAAAAAGACAGTCAGACAGTTGCAGCTCATCCAGAACGCTGCGGCCAGGATTCTGACCAGAACCAGAAAATCAGAGCACATCACACCTGTCCCCAGGTCTTTACACTGGCTCCCAGTTACAGTCAGAATAGAGTTTAAAGTATTATTACTTGTCTATAAATCACTAAATGGCCTAGGACCTAAATACATTACAGATATGCTCACTGAATACAAACCCAACAGATCACTCAGATCATTAGGATCATATAAACTAGAAGTTCCAAGAGTTCAGTCAAAGCAGGGGGAATCAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10382
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000065647 Essential Splice Site 238 471 8 15
ENSDART00000135888 Essential Splice Site 238 468 8 15
Genomic Location (Zv9):
Chromosome 11 (position 37063459)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 35960687
GRCz11 11 36222670
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GACATGTAAACATYTRTTCAAGTTTAMAGGACACAGAGGTGCCATATCGG[T/A]GAGTAAACAAATAYGAATATGTTTTCYCAGACCAGTTGTTTTGAATGRAT
Long Flanking Sequence:
TCTTAAACTTAGCAGAAACCCTGTTTATACTCTTAATACTTTGATTTTGAAATTCATCTATTTTTGGACTACAAGCTTTTAAATCTTTCACTTTACAAATTGCTGTTTTGTGTTTTCAAATGCTCAAGTCACTTAAACTCTTAGCATTTAGAGAGATGGATATATATGGATAATATTCTGCAAGCACTTATAAGCTGCTCAAGTCAAAAGATTATGGAGAAACATTCAGTGGATCAGATTGCATGTTTATATACACTTACAGTGCAGTTTAAGATTTAATCAGTGCAGACATTCTATCCTGAAATAAATTTACTAATGTTTATTTTAGGCCTGAGTGAGGTAGAGAGTTGGTTTGCTATTTGAGAGATTTCACTGATGTTTACTGATTGTTTTGTATATTTCATAGGCTAGCGGGGATATGAATAAACACATCATGATCTGGGATCCAGAGACATGTAAACATCTATTCAAGTTTACAGGACACAGAGGTGCCATATCGG[T/A]GAGTAAACAAATACGAATATGTTTTCTCAGACCAGTTGTTTTGAATGAATTAGCATATCTTCATATGATGAAATGTGTCTGCCTTATATTTCAGCCTGCACATATTTGATTGAATATGTTTCTCATGGTCTTAAAAACTTTCTCGGCAGGGTTTGGCTTTTAGACGAGGGACTCATACTCTCTACAGTGCGTCACATGACCGCTCCATTAAAGTGTGGAGTGTGGATGAAAACGCCTATGTAGAAACTCTGTAAGTGCACATGTCGGTGTGTAGATCTGGGTATCAATTCAGATGTGCTGATTTCATTTCAGTTCACAACCTCTCGATTGGATTTATAGAATATAAATTTAACACAAAAGCTGTGTGATGTTGTTGTTGTTAATATTATATCAGATGAATGGATGCATTAAAACTGAATCCAGCTCTGTTTATATTTTAATATTTTTTTTAGATATAAATGCTCGCGCACACGTATAGAGATAGATAGATAGATAGATAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21955
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000065647 Nonsense 244 471 9 15
ENSDART00000135888 Nonsense 244 468 9 15
Genomic Location (Zv9):
Chromosome 11 (position 37063294)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 35960522
GRCz11 11 36222505
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATGTTTCTCATGGTCTTAAAAACTTTCTCGGCAGGGTTTGGCTTTTAGA[C/T]GAGGGACTCATACTCTCTACAGTGCGTCACATGACCGCTCCATTAAAGTG
Long Flanking Sequence:
ATGGATAATATTCTGCAAGCACTTATAAGCTGCTCAAGTCAAAAGATTATGGAGAAACATTCAGTGGATCAGATTGCATGTTTATATACACTTACAGTGCAGTTTAAGATTTAATCAGTGCAGACATTCTATCCTGAAATAAATTTACTAATGTTTATTTTAGGCCTGAGTGAGGTAGAGAGTTGGTTTGCTATTTGAGAGATTTCACTGATGTTTACTGATTGTTTTGTATATTTCATAGGCTAGCGGGGATATGAATAAACACATCATGATCTGGGATCCAGAGACATGTAAACATCTATTCAAGTTTACAGGACACAGAGGTGCCATATCGGTGAGTAAACAAATACGAATATGTTTTCTCAGACCAGTTGTTTTGAATGAATTAGCATATCTTCATATGATGAAATGTGTCTGCCTTATATTTCAGCCTGCACATATTTGATTGAATATGTTTCTCATGGTCTTAAAAACTTTCTCGGCAGGGTTTGGCTTTTAGA[C/T]GAGGGACTCATACTCTCTACAGTGCGTCACATGACCGCTCCATTAAAGTGTGGAGTGTGGATGAAAACGCCTATGTAGAAACTCTGTAAGTGCACATGTCGGTGTGTAGATCTGGGTATCAATTCAGATGTGCTGATTTCATTTCAGTTCACAACCTCTCGATTGGATTTATAGAATATAAATTTAACACAAAAGCTGTGTGATGTTGTTGTTGTTAATATTATATCAGATGAATGGATGCATTAAAACTGAATCCAGCTCTGTTTATATTTTAATATTTTTTTTAGATATAAATGCTCGCGCACACGTATAGAGATAGATAGATAGATAGATAGATAGATAGATAGTAGGGCTGCACAATATATCACTATAATAGTAAAATTATCATTATCGTGATAATAGTATATGCAAAATAAAGACGTCTGTAATGAATTACATTTATTTTATGCATTGGTTGTTTATCTACATTTGACCAATCAGATGGAGCCTTGCTATATCCC
Associated Phenotype:
Not determined