ZMP

si:dkey-221h15.4

Ensembl ID:

ENSDARG00000041873

ZFIN ID:

ZDB-GENE-041014-340

Description:

Novel protein similar to vetebrate short-chain dehydrogenase/reductase 9 (SCDR9) [Source:UniProtKB/T

Human Orthologue:

SDR16C5

Human Description:

short chain dehydrogenase/reductase family 16C, member 5 [Source:HGNC Symbol;Acc:30311]

Mouse Orthologues:

Sdr16c5, Sdr16c6

Mouse Descriptions:

short chain dehydrogenase/reductase family 16C, member 5 Gene [Source:MGI Symbol;Acc:MGI:2668443]
short chain dehydrogenase/reductase family 16C, member 6 Gene [Source:MGI Symbol;Acc:MGI:2685269]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa15071	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa15071

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000061358	Essential Splice Site	161	350	2	6
ENSDART00000136896	Essential Splice Site	161	315	2	6

Genomic Location (Zv9):

Chromosome 20 (position 38858193)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	20	38930605
GRCz11	20	38833484

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

CAGTCTGGTRGACCGGACACTACGKGTCAATGCTGCTGCTCATTTCTGGG[T/A]AAAAATAAATAAATAAAANTCNNNNNNNNNNNNCGGTATAAATTCTTTATT

Long Flanking Sequence:

TATCTGTATTATAGTAAAAAATCTACTTACTAATTGTGATTTTAAATGTTTATTTTCGTCACCACTATTTTTAGATTTTATACAGCAAGAAGTTTAACATATGCAATTTTTCTGTGATCACTTATTCTTAATTTTTTTAATAAGTACATGTCAGAACAAGTGTGTTATTTTTACAAAAATGTATCTCACACTGAAATGGCAATGGAACATTGTTTTGCCATTACTTTGCCATTTTATTTTCACAAAACTTATGGAAAATATTAAAGTAGACACTTTGCCTTTAAAATGGTGTACATATATCAGTTAATCAATTTAATTTGACACAAAATATCATAACATGTGTGTTAATAAAACATTTCAACAGGTCAAAAGGGAGGTTGGAGATGTGTCAATCTTGGTCAATAACGCTGGAATGGTATCAGGAAAATACACTTTTCTTGAAGCCCCTGACAGTCTGGTGGACCGGACACTACGGGTCAATGCTGCTGCTCATTTCTGGG[T/A]AAAAATAAATAAATAAAATCAGCATTTTCCTCCGGTATAAATTCTTTATTCAACATTTTTTTAATGTTATGGGAACACTGAGATCACTGTTATCTCAAAAGTTTCTCGATGTTTATATTCACAGACTTACAAGGCATTTCTCCCAGCAATGTTGGAACAAGACCACGGGCACCTGTTGTGTGTGGCATGCCATGGAGCCTTGTTTGCAATGAATGGCCTTGCAGGTATAATCCTGAATGCACAATATCTCACATTTAGATTCACCCAAAAGACATTTTAAAATGTAGCACTGCCAACATGTATTTTGATCCACAGACTATTGTGCAAGCAAGTCTGCAGCAGTGAGATTTGCAGAATCTATTGCACTGGAGCTGCTTGTACTTAAAAAGGAAGGGATCAAAACAACAATAGTGTGTCCTTATTTAATTAATACAAACATGTTTGGCGGATGTCAAACTAAGTAAGTCAACACAGTTTCTATGAAATCTGATTAGAGATGA

Associated Phenotype:

Not determined