ZMP
si:dkey-102f14.5
Ensembl ID:
ZFIN ID:
Description:
lin-10 [Source:RefSeq peptide;Acc:NP_001076282]
Human Orthologue:
C16orf70
Human Description:
chromosome 16 open reading frame 70 [Source:HGNC Symbol;Acc:29564]
Mouse Orthologue:
D230025D16Rik
Mouse Description:
RIKEN cDNA D230025D16 gene Gene [Source:MGI Symbol;Acc:MGI:2443049]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa4746 | Nonsense | F2 line generated | Not yet available |
| sa2954 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa4746
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000090754 | Nonsense | 149 | 425 | 6 | 16 |
Genomic Location (Zv9):
Chromosome 18 (position 17156281)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 17508047 |
| GRCz11 | 18 | 17497113 |
KASP Assay ID:
554-3550.1 (used for ordering genotyping assays)
KASP Sequence:
GGGCTTTCTTTCTCCTTCCAGCTGGACTCCTGGAGTGAAGCCCCTAAATA[T/A]GAGGTAAGACTGCTTTCATACRCTTAATACCACGGCTCGGATTGACACCA
Long Flanking Sequence:
AGAATGAGGTCAATTGCTGACTCTTGTTTGTCACATTACATTGCAAATCTAGTTTGACTGATTCAGTGCTGTTTTTTCAGGTAATTGAAGTGTACGATTTGACCAAAGTCAAACTAAAATACTGGTAAGTGATCTTAGCTTTTACCACTATATTCGTGGATTACTATTTTGTTTCAACCAGTCTTAAGCTTCTTCTAGATTTAGTAAATGTTCTAATATGACCTATTGCTCTGTTCATTCTAGTGGAGTGCATTTTAACTCTCAGGCAATAGCACCTACTATCGAGCAGATTGATCAGTCTTTTGGCGCTACTCATCCAGGAGGTGAGATTCATTGCTAGGGTCAGTTGTTTGTAAAGACAGCTCTTTGTTTGTATATTTATTGTGAGTCTTTTGCTCTCTGTGTCTAGTCTACAATGCTGCCGAGCAGCTCTTCCATCTGAACTTCAGAGGGCTTTCTTTCTCCTTCCAGCTGGACTCCTGGAGTGAAGCCCCTAAATA[T/A]GAGGTAAGACTGCTTTCATACACTTAATACCACGGCTCGGATTGACACCATGTTCACATATCATGGTATTTAGATAGAATTGTAGAAAAAAAACAATGTATGACAATTGTACATATTGCGCGAAACCATGGCTTTGCATTTGACTTGAATTTTAAGCATGGATATGCTAATGCTATGATGATGTGAGCACCAGAAAAGACACCTGCACAGACACAACATTCTACTCCTAGTTGTTTTGCCTTGACAGCCTAACTTTGCCCATGGCTTGGCCTCCCTGCAGATTCCTCATGGGGCCACTGTCAAACGGATGTACATCTACTCCGGAAACAACCTTCAAGAAACCAAGTAAGAGCTGTGTGTGTATTTGTGTGCTGAGTTTTACTGGATGTTGGTAACAACCAAATAAATCCATATCTGCAAAGAAACAAAACTAATTAGTTTACAAATGAAGTTATGTGTAATAATAAAATGAAATGACAGAGAGAAAAATATTGAACACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2954
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000090754 | Nonsense | 222 | 425 | 9 | 16 |
Genomic Location (Zv9):
Chromosome 18 (position 17160497)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 17512263 |
| GRCz11 | 18 | 17501329 |
KASP Assay ID:
554-2672.1 (used for ordering genotyping assays)
KASP Sequence:
GGAATGCTTCTTTGTCCCACAATTYGTGTTATTTGACTTTTTCCAGGATG[C/A]GGCCCWGGAGTRCTGGCTGATACTAAAGTGCGAGCCGTAGAGAGAAGCAT
Long Flanking Sequence:
ACAATATTAATGCTTTTTCCTCCATGACTTTATATTCTATACTGTACATTATTTCTGTCAGGTGAAAGACTTTTGTCTAAGCAAAGTCAGACCTTACTGTCCTGATTAAATCATTAAAAGTCAAGGCATGATCATATTTTATTTTGGTAAAATAAGCGTAATCTAGAGGCCTTTGCTTTTCATATAAGCCACATCTGATACCAAACTAGGAGTCAAGTTATTATTGGTTGTTCCCAAAACATGGATAGGCGACAAGACTTTTGTCAGCACAAACTACAGAGCTAGCATGATCATAGATACACTGATCTTAAAATGTTATTTTTCATAGTTTTTACTATTTATTTGCTTGTTTCGGGGGAGGGGTTCTTTAGTAACATTATATTTGATATTGTGTGATATTATGCAGTTATCCAGAGATGTTAAAAGTTAGTAAAAACAAAGGTGTTCTTTGGAATGCTTCTTTGTCCCACAATTCGTGTTATTTGACTTTTTCCAGGATG[C/A]GGCCCAGGAGTGCTGGCTGATACTAAAGTGCGAGCCGTAGAGAGAAGCATCTACTTTGGAGATTCCTGTCAGGATGTTTTGAGTGCTCTTGGCTCCCCACATAAGGTCTTCTACAAATCAGAGGACAAAGTAATGAGCAGTCTAGTTTATTCTTTAGCCACATTCTCAAAAATAAACCAGCACATTCCCTCTCCACATTTACTCTTAATCCTAACATTTCTTTTCCTTTTTTGTACTTCTCAGATGAAGATCCATTCACCTTCCCCTCACAAGCAAGTCCCGTCCAAATGTAACGACTACTTCTTTAACTATTATATACTGGGAGTGGTGAGTATCAATTGAAAATTGCTCAGTCGATTATTCTACTTCTAATTATAACATGCAGTTAGAAAAAGCAGTATGTAGTAGATTCTTGAAGCAGTACCTTCTAAAAGAAGTATTTTCTATAATTGTAGAATAATTGTTTTAAATTTGAAGGATATTACTCAAAAAAAAAAAGA
Associated Phenotype:
Not determined