ZMP
setdb1a
Ensembl ID:
ZFIN ID:
Description:
Histone-lysine N-methyltransferase SETDB1-A [Source:UniProtKB/Swiss-Prot;Acc:Q1L8U8]
Human Orthologue:
SETDB1
Human Description:
SET domain, bifurcated 1 [Source:HGNC Symbol;Acc:10761]
Mouse Orthologue:
Setdb1
Mouse Description:
SET domain, bifurcated 1 Gene [Source:MGI Symbol;Acc:MGI:1934229]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa1056 | Essential Splice Site | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa1056
Status:
F2 line generated
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For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000060442 | Essential Splice Site | 1374 | 1442 | 19 | 21 |
| ENSDART00000088336 | Essential Splice Site | 1368 | 1436 | 19 | 21 |
| ENSDART00000144985 | None | None | 145 | None | 3 |
Genomic Location (Zv9):
Chromosome 19 (position 9763339)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 9221878 |
| GRCz11 | 19 | 9140803 |
KASP Assay ID:
554-0959.1 (used for ordering genotyping assays)
KASP Sequence:
TTACATCATTGATGCTCGGCAAGAGGGAAACCTCGGCCGTTATATAAACG[T/A]AAGCAAAAGCCGGAATTGTTATCAAAATTGAACAATGCTTTAATGGTACT
Long Flanking Sequence:
AAAGTTGTTATTACTTAAACCAGCAACATTTCAACATTGATAGGTTTGATGTATAGACTTATCCTAAATGACATCTAGCAGCTAACTTTTTTTGCCTCATTTTTGTTTGTTTAGTCCATGACAAACCTTTAGGTGAGAGAAAACTGCCAAATAAACCACATGAAACACCGAAAGATACTCAGAAGAAAATTAGTGAACTAAGGAAAAATGACGGTCAGTTTTTTCTTTTTCTTTTTTTTTTGTCTCTCTCTTCTTCTGCTTTTAGCATTCACTACATTTGCTCAGTCTGTAATTTGTGTCATCAGGACAAGAGAGCTCAGGCCCGAAGCGATGCTTTGCCATAAAGTCATTCCAGAGAAGAGTAAAACCACTAGAAAGCACTGAAGCACAGAAAGAAAAAACTAAAACTCCCAAAAACACACGCGGACTGTTCAACGATGAGGACGCTTGTTACATCATTGATGCTCGGCAAGAGGGAAACCTCGGCCGTTATATAAACG[T/A]AAGCAAAAGCCGGAATTGTTATCAAAATTGAACAATGCTTTAATGGTACTTTAATTTTAACATTTTTACAATTTCTCTCAACAGCATAGCTGCAGCCCCAATTTATTTGTCCAGAACGTCTTTGTGGACACACACGACCTCCGCTTTCCATGGGTGGCTTTCTTTGCTAGCAAGTCAGTGTCTTAATTCTCACCAATCTGATTTTCATGTGAAAAGGGTGTAGATAAATCAGCCGTCCTTAAAAATGAGTGTTTGATTTGAGAACAGCATTTCATATAACATTAGTAAGTTAAAGAAATTTTGACACAATCAGGGGTGCGTTTCCCAAACAAAGACTTTAGTGTGTTTGACAAAATCATAGTTTCTCTGTTGCTGGTCCATCGTTTGAACCACGTTAGTTATAAGGTAAAACGTCCAAAAAGACGCTTTAAACGGGGCGGAGTCAGGGCCGGAGTGGGAATCCTTTTCAGCCCTGGAGTTTTAAGCCTTAGACCGGCCCA
Associated Phenotype:
Not determined