ZMP
cdc40
Ensembl ID:
ZFIN ID:
Description:
pre-mRNA-processing factor 17 [Source:RefSeq peptide;Acc:NP_001009990]
Human Orthologue:
CDC40
Human Description:
cell division cycle 40 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:17350]
Mouse Orthologue:
Cdc40
Mouse Description:
cell division cycle 40 homolog (yeast) Gene [Source:MGI Symbol;Acc:MGI:1918963]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa37184 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa37184
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000060432 | Essential Splice Site | 288 | 578 | 7 | 15 |
Genomic Location (Zv9):
Chromosome 20 (position 53734550)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 53579329 |
| GRCz11 | 20 | 53384746 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AATGCTACCTGCCCAAAAAACAGCTGCACGTCTGGACCGGACACACCAAG[G/A]TAAGCAACAGCACTATTGATAGACCCCGAATAAGTGTCCAGTTGGATCTA
Long Flanking Sequence:
ATAAGTCAATCTCCCTGCTATCTCTAACACAACAAAGCCCACGCGTGCGCGGCAACAATTAAGTAATTTATCAGCTTAAAGATATCGGCCTAATTTAGACATCGGATCGATAACGATAATCTTAAAAATAGCATTTATCGGCCGATAACTATATGGCCTCCGATATATCGTGCATCCCTAACCTGTATAATTATGTGTAAAACTGTGTTGACAGCAAGATCTTCTCTCTGGTAAACACCACTTGGGAAATATTTGCAGCTGCTAATGATGTTGTCTTGAACTGTTCATGGATATATCCTTCGGTACATGTATGCATACACTGAGGCGCACTTTTACAGCTCAATCTGTTTCTCTTCACAGTTAAAGACGCGTACGATTACCAGGGCCGCTCGTACCTACACATTCCTCAAGACGTGGGCATCAACCTGCGCTCGGCTGACATCCCGGACAAATGCTACCTGCCCAAAAAACAGCTGCACGTCTGGACCGGACACACCAAG[G/A]TAAGCAACAGCACTATTGATAGACCCCGAATAAGTGTCCAGTTGGATCTAAAACCAACAAGTTGTGCATATGTTAAAAAAAATGGTGATTGGGATCTGCATACAAGAAACGGGATCATGAAGTGATGATGAACAATACATTTATTACAGTATTTATTCATCTTTGTTATAAAAAATGTTCTGCAAATATTTATTGTTTTTTAAATTTCTAATATTTTATTTTTTTGCACTGCTTGATTTTTTTTTTATCTATTTGATTTCATTTTAGTTATTTTTTGTTTGTAAATATTTATTTTAATTTCTCAACATTTATTTTCTCATTGCAGTTCTTTATTTTTGTTGGCAAATTTCATTACTATTATTTTTTTTCCCCAAAAAGAATTTTCCATTAATTAATTAATTAATTTATTTATTTATTAATTTATTATTTTATTAATTTATTTATTTATTATTTTTTTATTTATTATTATTATTATTATTATTATTTATTTTATTTATTTA
Associated Phenotype:
Not determined