ZMP
scn2b
Ensembl ID:
ZFIN IDs:
Description:
sodium channel subunit beta-2 [Source:RefSeq peptide;Acc:NP_001071097]
Human Orthologue:
SCN2B
Human Description:
sodium channel, voltage-gated, type II, beta [Source:HGNC Symbol;Acc:10589]
Mouse Orthologue:
Scn2b
Mouse Description:
sodium channel, voltage-gated, type II, beta Gene [Source:MGI Symbol;Acc:MGI:106921]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa32016 | Essential Splice Site | Available for shipment | Available now |
| sa39036 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa32016
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000101293 | Essential Splice Site | 28 | 223 | 1 | 6 |
| ENSDART00000101294 | Essential Splice Site | 28 | 230 | 1 | 5 |
Genomic Location (Zv9):
Chromosome 15 (position 12916795)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 12614022 |
| GRCz11 | 15 | 12545439 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGGCGTCCGCTTTGAAATTATCCTGTGTTGCAATGGTGATGTTTCTGGG[T/C]AAGTAAAAAAAGAGCTTCTGCTATGGGGGGAATAAATGAAGCACATCATT
Long Flanking Sequence:
GATGAGGAGAGGTGGTGCTACTGCAAGCTGCTGCATCATTTTTTGGTTTCGCATCAACAACCGCGTGGATTTTTGTAGACTAATTTCTGGCTGTGGCGAATCGAGGAAAGACATGCAATAAATAAATGCATATTTTTTAAATCGTTTAATATTGCCTATATTAAATTTCTACATTATTTCTTCGGTGCAATAATAGTTTAATGTTACAAAGTGATTAGTGTCAACCCCCTTGTACAAGAAATCAAAAACGGCAACCATAATATCAACCAGTTCCCTGCTACAGACACTGCCAGCCATATCATAGCACAAAATAAAACACATTTTCCTAGTTTTTTTGTATGTCTGAAACGGAGAAATAGATCTCAAACGCATTTGTTTTATTCTTATTTTGCGATCCTTACATTTCCAGCGACCAAAATGCTCATTTCATTGCATTCTGGGGAAACGCAATGGGCGTCCGCTTTGAAATTATCCTGTGTTGCAATGGTGATGTTTCTGGG[T/C]AAGTAAAAAAAGAGCTTCTGCTATGGGGGGAATAAATGAAGCACATCATTAAAATGACAATTTGTTTGCAATATGGCGTATTTCCCTGAGCCATGTTATGATATGTGTGAAGAAGGGATGATAATAAAAAGTAGGCGTCATTACATACCTATAGCGTTTTATGGTCATCACAGATTACCTGTCAATCACTTTGAGGAATACGGCTGTAGCTCTGTTCAAATCGCCATTGGTACTATAGCTACCCTGTCGTAAGCGCATTCAGATCAGAATAAGTGTAGTAATCAAAGCAAGACAAACTGCAAATAATTATACGTGCATGCATAGGAAATTTTTTTTCATACAAGCCGCTGTGATTGTTTTTAATGATCTGTTTAGCATTTATAAAGCTCTCTGTCAAATTCATGGTATAAGTCCATACTGCTTCTATTTGTTTGATTTCAGTGACTCCTTCTTCAAGTAACATGGTTAGACCAGTAGCTGGCAGCAAATTAATGTGTTAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39036
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000101293 | Essential Splice Site | 221 | 223 | 4 | 6 |
| ENSDART00000101294 | Essential Splice Site | 221 | 230 | 4 | 5 |
Genomic Location (Zv9):
Chromosome 15 (position 12936607)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 12594210 |
| GRCz11 | 15 | 12525627 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAAGAAGAGGGCAAAGTAGATGGTGAAGGAGGCACAGAAGAAGCAACAAA[G/T]TAAGAATTTCTGTCTTTTATTTTCTCCCTTTGCCAGTATTTTAGTGTTTC
Long Flanking Sequence:
TAATGCCTTATCTACCTTTTAAATTATCATGACAGACCATGGTTTAAAGGTCTTTTCCAGCCAGAGTTAATCCAAGCCATTTTGAACTTGAACAAAACAAGCTTTGTATTGGCCTGATTTTGTTTGTAATCATGTCACAAATGTTCAATTTCATTTAAATTCAAAATACTTCACTTGAAGTGCACTAGGACCATAAAGCTTTAGCAGATTACCATAGGTCAGTTAGCATCTGGTAGATACTGCAACTGTTCAATCTTGGACCAGAAAGCAGTTTTGTAACCAACCTCTGTTATCTTCTGCCCAGTACCTCCACCAAGGGACTCGACCATTGCTGTGGCCATCGGCGCATCTGTGGGGGGCATCCTTGCTCTGCTCATTCTGTCCATGGTGGTGGTGAAGTGCATCCGCAGACATAAGAACCAGGAGCTGATCTCAGACGAGCAGAAGATGGAAGAAGAGGGCAAAGTAGATGGTGAAGGAGGCACAGAAGAAGCAACAAA[G/T]TAAGAATTTCTGTCTTTTATTTTCTCCCTTTGCCAGTATTTTAGTGTTTCGTCCCTGTGAACAAACTGCTTACTCTGAATCCTGAAACAGACAGCCCTAACCCGTCATGTTAGCCCTGGAGGCCTAATGGATGGTGGAGCTCCATGCTTCATGTTCTGGTAAAACCGATTGCTAGCTGGTGTGTTTTGGTGGTCATGTGACTGTGGTTGACAGTAGACCTTTCAAGTTCTCTTTCCATATTTGTTTCATCAGTCTGTCCATCTGGTTTATGATTTCTGTCCTGAATTATCTGGTTGCTATCAGTCTGTTTATAGCTTTTCTTTTTTATCTGGTTGGGCTCTGTAGGCCTAATCCCAATTCTACCCCTTAGCCCTTCCCTTTCAAACAAAGATTTTTCCGGACCACACTACAAACAAAAGGGTATTAGACATTTTCCTGAATAAATCAGCTGCAAACAACAAAGGGATCCCCACAGCTAAAAAAAATAGGGATTTACTACA
Associated Phenotype:
Not determined