ZMP

si:dkey-49n23.1

Ensembl ID:

ENSDARG00000040920

ZFIN ID:

ZDB-GENE-050208-762

Description:

Novel protein similar to semaphorin 3 family (Sema3) [Source:UniProtKB/TrEMBL;Acc:Q1MTG9]

Human Orthologue:

SEMA3D

Human Description:

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D [Source:HGNC

Mouse Orthologue:

Sema3d

Mouse Description:

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D Gene [Source:

Alleles

There are 4 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa24202	Nonsense	Available for shipment	Available now
sa37551	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa24202

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

G > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000059965	Nonsense	582	1008	16	21
ENSDART00000133335	Nonsense	527	703	15	16

Genomic Location (Zv9):

Chromosome 22 (position 33507054)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	22	30868592
GRCz11	22	30817787

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TTATAGTAAGTTAAAAGTGTTCATTGCTGTCTGTAGGCTCAGAGAATGCT[G/T]AACTGAAGACGGTTTACGGCGTGGAGACAAACTCAACTTTCCTGGAATGT

Long Flanking Sequence:

CAGAGTTCATTTTTGGGTGATACTGTATCCCTTTTACTCATGTAGCATGCATAAAAGTGCACATGCTGTGAAATATAGTAGAAACCACATCTTGACCCTAACCTCTTTTAATCATTGCTGAAGACAATATTGAAAACCATCAGCAAACCTGTCAAATGGTGGTTGTGAGGGTGGGTAACATCCTCTTATGGTCCACAGGCGCGCCCGGAGACAGGATGTGAGGTATGGAGACCCTTGGAGCCAATGTCAGGACATGAGAGACGGTAATAAATCACTTTACAACTTTTCATCTTCATGTTGTATATGATATTTCCCAGTCCTCGAATAAAGAGGACGCTACTCCCTCTAGTGTACAAAATGGATATTGACATACAACACCAGTTAATATGGGATGCATGTTCTAGGTCTTTCTGTGAATAACTAATTTTAAAAGAAAGTATACGATAAATATTATAGTAAGTTAAAAGTGTTCATTGCTGTCTGTAGGCTCAGAGAATGCT[G/T]AACTGAAGACGGTTTACGGCGTGGAGACAAACTCAACTTTCCTGGAATGTGTCTCAAATTCACCACAAGCCACTATCAAGTGGATATTTCAGCCAAATCACAGTCAAAACAGCAAAGAGGTCTGTCGACATACTCTTTAACTGAATATTAAATCAGAGTCAATATGTGTACAGTATATTTATACTGAAAGGTTTAGTTTTCCCAAACAATGAAAATTAATCATTAATTACTTACCCTCATGCCATTCCAAATCCATCTTTGGAACACAAATGAAGATAGTTTTCATAATATTTTAGATATTTAGAGACTGTCTTTTGAGATTTATAGATTTAGAGACTGTCTCTTGAGTTTTATAGATTCAGAGACTGTCCTTTGAGATGTATAGATGTAGAGACTGTCTCTTGACAGTCTATTTATCCAAAACTCTAATTATTTAAATAATTCCTTAAAGTTCAGTTAAAAGTTTGAGAGTTTTGGGTGAACACAAGTGCCTTTATGGG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa37551

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000059965	Nonsense	940	1008	19	21
ENSDART00000133335	None	None	703	None	16

Genomic Location (Zv9):

Chromosome 22 (position 33447740)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	22	30808871
GRCz11	22	30758066

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AAAACGCCTACAGCTGCGTGATTAACAACACCATCAGCAACAAGACTAAA[C/T]AGTTTAACACTGATGAACACTGTCCGATATGTAAAGGTATGTGAGGGAGT

Long Flanking Sequence:

CAGTGACTATCTCTATTGAGTGCATTGTGTTTGACATTACAAGTCTGAGACATGCAGTCTTGGCTTGCAAATGCACTCAGATACTATAGATTTTTTCCCTTTCCAGGTCTTCTTATATCTCCACACATAAGCAGAACGAAAATTCAGTCAATAACTTAAACAAGTTTTATTAGACTTTTAAGAGTGAGACACTGCAGGACTCCATTTTGTTTCCCGATCTAAAAATGTTTTCTTCTTTATTTCCAGCTCAACTTTTCAATCCAGAAATCACCTGTGAGATTTCAAAAAAAAATTCTGAAGGTTCATCAGTTTCTCGCTGTAATCTCCTATGTTCAGTGGTACATGTGAGAGATGTAAGTCTCTCCTGGTACAAAGAAAACAGTTTAATCTCCAGCATCAGTGTGTCTGATCTCAGCAACAGTCTCTCTCTGGAGGTGGACTATGAGGATAAAAACGCCTACAGCTGCGTGATTAACAACACCATCAGCAACAAGACTAAA[C/T]AGTTTAACACTGATGAACACTGTCCGATATGTAAAGGTATGTGAGGGAGTTTATGCACTGAACTAATCTCTCAGCCATGAATTTAATAAAGTGGCTTTGAAATACAGTAACTGATAAGATGTACAGCATGTTTTTATATTGTAAGTTTTACGGTTTGCCTACAATAAAGTATTTATACCTATGGTACTTTATTGAATTTGTTAGTAGTTTTACTTTTTCTTTGTCTTTTCAGTTTCTTGCTTTAGATGGATATATCTTTTAATGCTGCCTTTTGTAGCATTTATTTGCATAATTTCCTCTGTTGTGATATGCTTCTGTAAAAACAAAGCCGGATTTCAAAAAGGCAAGTCTTATATGGCAAACACATACATTTTTTTCCTCAAAGTACTAATATATTTTAATGAACTGAAAATAAAACATCATGTGTCTTTCTGCTTTTCAGTAAACCTGGAAGCTGGGCATGCAGAAAAAAAATCTGCTCTGACCACCACGGATCAAGT

Associated Phenotype:

Not determined