ZMP
ctdsp1
Ensembl ID:
ZFIN ID:
Description:
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 [Source:RefSeq peptide;
Human Orthologue:
CTDSP1
Human Description:
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:HGNC Sym
Mouse Orthologue:
Ctdsp1
Mouse Description:
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 Gene [Source:MGI
Alleles
There are 3 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa18259 | Nonsense | Available for shipment | Available now |
Mutation Details
This allele has been removed from public view.
Allele Name:
sa5558
Status:
Allele not cryopreserved
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000100226 | Nonsense | 86 | 265 | 3 | 7 |
Genomic Location (Zv9):
Chromosome 9 (position 42794345)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 41919515 |
GRCz11 | 9 | 41721302 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCAATGTCCTTGAACTTTTATTACAGGTCCCAGCCAAACCACTTCTTCCA[C/T]AGATAAAGTCTAAAGATGTAGGGAAGATCTGCGTAGTAATTGATCTGGAT
Long Flanking Sequence:
TACTAATAAACTAATACCATCCAATTTTGGCATCATAGTTAGCTCAACTAGTTTTAGTGCAGTTGTTGCTTGCTTTTTCTCAATTTCTGGAGACGTCATATATATTTACAGTTTTCCATGTGACTTTACCGCTCTCACACGTGAAGAACTTGAAACCGCTCTGTCCACTGATAGCTCCTCATATAAACATATAGAATATCAAATAAAATCTTTGCCGGTTGACACATTTTACTGTCTGCAATACAGTACATGCCTTCATAGCAACCAGCTGTACACGTATTACTTATAAAACTAGATTTCTTGTCTACTAGCACATTAGAGGAGACTCATGGAGTCTTAGTATTTCTTATGTGCAAGTTGTATGTTCTTATAGGTAATGTATATAATGTGTACTGTGTTTTAAATGTAAAACAACTTCTTGTTTCAAATGCCACCTTGGTTAATTATTTACCAATGTCCTTGAACTTTTATTACAGGTCCCAGCCAAACCACTTCTTCCA[C/T]AGATAAAGTCTAAAGATGTAGGGAAGATCTGCGTAGTAATTGATCTGGATGAAACACTAGTCCACAGTTCATTCAAGGTAGGCCAATGTGTTGAGTTATTTTTTTTTTTCTTATTGGTTTATAGCTGGTAGCAGGTGTGAGTTTATATCATGCTGTTGGCAACCTAACTAACCTTATCATAGCCATGGATACACTTGAGTCAAACATTATACTGGCGTTAAGCAACATTGCTTGTGTTTACATCAAAACTTTAAAACTTAATTCATTATTTGATGCTAAAATGTTTTATCTTGTCCAGGCTCAAAGGTTTAGCTTACTTAAATATATAAATAAGGTGAAATTTGACTCATCTTGTGAACTTTTCTTTTCATTTCTAAGCATTTCTTTTGTAAATTATTTTGTGAATATTTCAGTTTTGTTTTTTTTATTTTTACTACATAATTATATTCACTATGGTCCCCTTTTGTTTTTAACTTTCATTGATAAAAATGTTTTAAAAT
Associated Phenotype:
Not determined
Mutation Details
This allele has been removed from public view.
Allele Name:
sa3740
Status:
Allele not cryopreserved
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000100226 | Essential Splice Site | 223 | 265 | 6 | 7 |
Genomic Location (Zv9):
Chromosome 9 (position 42809768)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 41934938 |
GRCz11 | 9 | 41736725 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CATTGTGGACAACTCGCCAGCCTCCTACATATTCCACCCAGACAATGCTG[T/A]ACGTTACTGCCTTTCTTTGTTCTGTGGCACTAATGCGCTTATTACTGCTA
Long Flanking Sequence:
TAATTAGGTTAACTAGGCAGGTTAAGGTAGTTAGGCAAGTTCTTGTATAATGATGGTTTGTTCTGTAGATTATCAAAAAATATATATCTTAAAGAGGCTAATCATTTTGACCTTAAAATGGTTTTTAAAAAAATAAAAACTGCTTTTATTCTAGCCGAAATAAAACAGATAAGACTTTTTATATTCATTCTGATGTGGACACTAAAATGGGATTTCACATCTTTAACTTAACATCTTTGTTGATGCTTGACACTTTGCTTCCATTTCAGTCTAACTGTGTCTTTCACTTTCCTGTGGTTTTGTTATTTTCTAGTATGCTGATCCCGTCTCGGATCTGCTGGACAAATGGGGAGCTTTCCGAAGCCGTCTTTTCCGGGAATCCTGTGTGTTCCATCGCGGAAATTATGTGAAGGACCTAAGCCGTCTAGGCAGGGATCTCAACAAAGTCATCATTGTGGACAACTCGCCAGCCTCCTACATATTCCACCCAGACAATGCTG[T/A]ACGTTACTGCCTTTCTTTGTTCTGTGGCACTAATGCGCTTATTACTGCTAAAAGAGTTTTACTAAACCTCATGAGAATGTATTTATCAGAGCATATGTCATATTGTAAAATTGAAAAAGAAAAAAAAAAAAGATATGGGTGGCAAACTCGGTTACTGGAGGGGCGCAGCTCTGCACAGTTTAATTCCAAACCTAATTAAACACACATGATCAAACTGATTGAGTGCTTTAGGCTTGTTTGCTACCTACAGGTGTGTTGAAGCAGGGCTGGAACTAAACTCTGCAGGGCTGCGGCCCTTTACGAGTTTGACACCCTTTCTATAAGAGTTAATTCTATACTTTTAAGTCAGCAGAGAAATCAACACAATCTCACTGCAATTGAAACCTTTTGATTTACTGTAATTTTTGTATGATTTAATTAGTACATTTTAGTGCAATGGTTGCCAAACTGGGATGCATGCATCCATATGGGTGCGCAATCTGACTACCAGGTGTGCACGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18259
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000100226 | Nonsense | 255 | 265 | 7 | 7 |
Genomic Location (Zv9):
Chromosome 9 (position 42812606)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 41937776 |
GRCz11 | 9 | 41739563 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTGGATCTCATCCCGTTTTTCGAGAGACYGAGTAAAGTGGATAACGTCTA[C/A]ACTGTRCTCAAGCAGCAGAGGACTACTAGTTAGCATGACWCTAAAAGCAG
Long Flanking Sequence:
TTATTATGGGTGTATTTTGACTATTTTAAAACCAAAGCTGTTAAATTATTGCAAATGTTTTTTTTTTTTTGTTTTTTTTTATTGAAACTTTGGTAACTCTTTAAAATAATGATGTATTATTTAATGTATTTACTAACATGAATAAGCAATTAATAATACATTTCTTACAATATTTATGTATCTTCATTCATTTTAGTTTGTGGAAATAAAATTGTTCATGATAATATTAATGTATTTGGATAAATATTTTAATAATGCATCAGTAAATGTTGAACTATGATTATTATTAAATGCTGTACAAGTATTGTTCATTGTCACTTCATGTTAATAAATTCTTTAATTAGCAATATATTCACTTTATATCCCAGTATTTCTGAACACAAACTCTTCTTCTGTCGCGTTTAGGTACCTGTAGCCTCCTGGTTTGACGACATGTCTGACACAGAGCTGCTGGATCTCATCCCGTTTTTCGAGAGACTGAGTAAAGTGGATAACGTCTA[C/A]ACTGTGCTCAAGCAGCAGAGGACTACTAGTTAGCATGACACTAAAAGCAGCTGTCACTTTGGGGCCAGGGAGGCTGCGGGGCCCGGAGCGCCACACTGCTTCCCCCTAACAGGACCAGCCACTAGCTCAGTCCTCATCACCTACCCACAATTCCATTCACATGATTGTTTGATAGAAAGAGAGAGAGAGTAAAGACAGAACTGTGAAGGACTGCTTTATCCATTACATGCATAAAACAGTGAATCAAGAAGCTGATTGTTTTGACACTCGATTGGGTGAACTTTTTAGGAAAGCTGCCGAAAAGTTTTCACAAAGGAAATCGTATTTTGTTTAAAGAAAACGCAGCAGCCAAGCACATTTCCCCCCGATTTTTGTATTAATGCAGGAAATGCAAACTTATATATTACTGTAATGTGTAAAAAAAAACATGATAATATATTAAAATTGTATTGTATTTATACATTATGGTTGTATTTGTTGTACTGCCTTTAATTTATTTG
Associated Phenotype:
Not determined