Busch Lab

ZMP

cadm4

Ensembl ID:
ENSDARG00000040291
ZFIN ID:
ZDB-GENE-041114-138
Description:
cell adhesion molecule 4 [Source:RefSeq peptide;Acc:NP_001007429]
Human Orthologue:
CADM4
Human Description:
cell adhesion molecule 4 [Source:HGNC Symbol;Acc:30825]
Mouse Orthologue:
Cadm4
Mouse Description:
cell adhesion molecule 4 Gene [Source:MGI Symbol;Acc:MGI:2449088]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa12426 Nonsense Available for shipment Available now
sa36121 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa12426
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000058960 Nonsense 50 367 1 7
ENSDART00000111564 Nonsense 76 415 2 9
ENSDART00000134120 Nonsense 74 413 2 9
ENSDART00000143761 Nonsense 74 391 2 8

The following transcripts of ENSDARG00000040291 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 16 (position 26541348)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 24387023
GRCz11 16 24302055
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCGTGGTCATCCAGAACCCACGCAGACAGACGCTCTTCTTTAATGGAACA[C/T]GAGRTGAGAACTGCCACTGCTAGGATGATAATTGCTAGTCGGTCTTTTTA
Long Flanking Sequence:
AGAGAGAAGTGTGTCAGCCCACAGTAATGGATAAAGATAACGATGCTATTGGTCTTACCAGCACTTAATTAGGACTCTTTTCTTTTCTTTTTCTCCCCTCCGTTGTCTCCGTCTATCTGTCAGTCTCTCATTATTTTCTTTTTTTTCACTCACTCGGTCTCTGCTCTTCTGCATAGTTCACACTTCTAAGCACCGAGGTAGTTACGTGAGCGAAGTGTTAATTGGTCACTGAGGTATTTCTGTCTTCCGATATGCTCCATGTGCCACTTTTGTCTTCTGTCCATCAAAAAACACCTTTATAAATGTTTAAATTCACCAAATGAAAGTTGTGCGCTAACTTGGGTTTCTGTTTTTCAGCGAGAGGGCAGGCCGTCCAGGCGGAGAACGTGACCGTGCTGGAGGGAGGAACGGCTCAGATCTCCTGCCGTCTCCAGAATTATGACGGTTCAATCGTGGTCATCCAGAACCCACGCAGACAGACGCTCTTCTTTAATGGAACA[C/T]GAGGTGAGAACTGCCACTGCTAGGATGATAATTGCTAGTCGGTCTTTTTAAAAAAACAGCATAATTTGTGTTCACACAAAGTTACTGTGGCACATTTAATTTATTATGCTAGCTCGTATCGCTTTGTATTAGCTGCAAGTTCATGCTGCAGTTTAAAGAACTGATTGGTGGGATTTAAAAAAAAAACAACAACAACAAAGAAACAACTTTAAACAGCCTGATACCACTAGGAATCTGAACTATTTTACATATTGCCATTTAGTTCATATAAAAACATATGATTTTTAAAAGAAGACGTGAACCCAAACTAGATATAGGATGATAACCATTTTCACAACTTTGAAAAGTCAAAGTTATTAAATCACCAACATTTTTCGTTATACCATTCCTACGGTATATGTAAGATTTTTTTTTTTAATTCCCAAGTTCAAAATCACCTACTACTCCAGTGCTTTCCACAGGCTAGATTGAAACACACTATTTACCCACATCACATAAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36121
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000058960 Nonsense 239 367 5 7
ENSDART00000111564 Nonsense 265 415 6 9
ENSDART00000134120 Nonsense 263 413 6 9
ENSDART00000143761 Nonsense 263 391 6 8

The following transcripts of ENSDARG00000040291 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 16 (position 26492565)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 24338240
GRCz11 16 24253272
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCAATGTCATCTTCCACTTCCTTTCTAGACCACGTGACATCCAGTGGTCA[C/T]GAGTGAACGACACTCTTCCTGAGAGGGCGGAGAAAACCGGCAACATCCTC
Long Flanking Sequence:
GATTTAAATGGATTTAAAAATGGTAATGATTTAAAAAGCTTTTGTGAACATTTTGTTATTACTCTGTTATTTCTCAGTATCATTTATTTAATTACTATTATTTACTTTTAAAATGTGCTGAAGTAAATTTTAAATTATGTCAGTGGATTAAAAACAAATTTCAATTATATTTTCTAATTTACATAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACTGTTTTTTTTTATTTTATTTTTTTTTTATATATTTCCTAACCCTAAGTCATACACAGATTGTAGTTCTTTAATGCCTTTTTTATATTACCTTATTTCCATTCTCCGTCTCTGGAGCCTCATTATTTGGAAGAGATTTGATTTTGAGCTTTTCTTTTAATGCCTTTGTTCTGTCTTTGATAAATTCTTGATTGCTTCTTTAATGCAATGTCATCTTCCACTTCCTTTCTAGACCACGTGACATCCAGTGGTCA[C/T]GAGTGAACGACACTCTTCCTGAGAGGGCGGAGAAAACCGGCAACATCCTCCACATGTCTCGCCTCAGCCAATCACACAATGGCACCTACCTCTGTCAGGCACATAATAATTACGGCCGTGCAGCTGATCACTACACACTGCTGGTGTATGGTAAGAAATCAAGTGATCCCTGAACTCGACATTAAACCCTAACCACTTCAAACTACTCGAAGCAGATCATATGTTTGCATAGGGCTGTGCAATTGATTGAAATTCAGTTATGAAGTTGATATTGGCCTATAATGATTATGAAAAAAACAAGAATAAAAATGCATGAGTAACAGTAAATTGGGTCCGTGTGGCTCTTTAATAGCTGTTTTCACTGAGTAGTATGGTACGATACAGTTTGGTTTGGTGCGCTTTTATGGCCATTTCCACTGTCAAAAGGTACCAAAAAGCGAACAGTGCTGTACAACCAAAGGGTACCAAAAGGCGGAGCAAGATGTGCAACTGAAGGTTGT
Associated Phenotype:
Not determined