ZMP
runx2a
Ensembl ID:
ZFIN ID:
Description:
runt-related transcription factor 2 [Source:RefSeq peptide;Acc:NP_998023]
Human Orthologue:
RUNX2
Human Description:
runt-related transcription factor 2 [Source:HGNC Symbol;Acc:10472]
Mouse Orthologue:
Runx2
Mouse Description:
runt related transcription factor 2 Gene [Source:MGI Symbol;Acc:MGI:99829]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa13625 | Nonsense | Available for shipment | Available now |
| sa2928 | Essential Splice Site | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa13625
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000081849 | None | None | 203 | None | 5 |
| ENSDART00000081854 | None | None | 57 | None | 4 |
| ENSDART00000105394 | Nonsense | 192 | 467 | 5 | 7 |
| ENSDART00000131430 | Nonsense | 178 | 453 | 4 | 6 |
Genomic Location (Zv9):
Chromosome 17 (position 5222718)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 5323372 |
| GRCz11 | 17 | 5480468 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAGGAGGGGTGTTAAYTGCAATCTCTGTCTAATATTRTTCGTTAGGACAC[A/T]GACAGAAACTGGAAGACCCCCCTAAACCGCCGCTGTTCTCCGAGCGCCTG
Long Flanking Sequence:
ACAATAGTCAGGTACTGGTATGTGCGTGAGTGTGTGCATGTGAGTCATTTTTTTTTTAAGTTTGTATATGTATTAACATATGTATTTTATCATCTTTGCATCAAAATCCAAAAAATAAATAAACAAAAAAATACAGCTTATGCAAGGTGTCTGAACTATAGGCTATAAAAAACTGCATCATCTCAGCAGGACAGTAAATTTGACATTGTTTTCTCTTATGGCTGCCATTATCAGTCTCGCACAATTCTTTTATTTCCTTGATAACACCATTGTGGAGTTTTCTTTTATTATTTCTGCAAATAAGACCATTGTTGCACTCTCCCATTCACTGCGCTCTAAAGTATAACCAACTATGACGACCTCCACAACCCAGAAAACCCAGAAATGTGAAAAGAGTCCTTGTTTATTTTGCGTGAACTGTCCCTTTAATACTGAGTGATTAGAATCAAGCAGGAGGGGTGTTAATTGCAATCTCTGTCTAATATTGTTCGTTAGGACAC[A/T]GACAGAAACTGGAAGACCCCCCTAAACCGCCGCTGTTCTCCGAGCGCCTGAGCGAATTAGAGCGTTTACGCCAGACCACCATGAGAGTCGCTGTGCAAACCCAGAGTCCCCGGCCGTCTCTCAACGCCACGCCGAACTCCTTCAATCCACAGGGGCAAACGCAGATCTCAGGTAAACCGGCTCAGGCATTTTCCTTTCCTTTAAAGGCCCACTACACATTTCTTAAAAATAGGCTCATTTGTATAACTTAATAAGCTAAGCTTAGCTTAGCTTAGCATAGTTCATTAAATCGGATTAGACTATAAGCATCTCGCTTAAAAATGAACAATGAGTTTCGATAATTTACAGTATAACTATTCTGTTGTTACATCGCGTACTAAGACTGACGGAAAATAAAAAGCTGCTATTTTCTAGGTTTCAGTGATTTTATGCAGTGCTAATATCAGTACGCTAATAACGGTACGCTCCCTCTGCAAGCAGGTGGTCACCAGTGTTGGCTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2928
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000081849 | None | None | 203 | None | 5 |
| ENSDART00000081854 | None | None | 57 | None | 4 |
| ENSDART00000105394 | Essential Splice Site | 303 | 467 | 6 | 7 |
| ENSDART00000131430 | Essential Splice Site | 289 | 453 | 5 | 6 |
Genomic Location (Zv9):
Chromosome 17 (position 5227964)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 5328618 |
| GRCz11 | 17 | 5485714 |
KASP Assay ID:
554-3337.1 (used for ordering genotyping assays)
KASP Sequence:
CGTGCCACCGGCCTGCCCACCATCAGCGACGTGCCACGACGCCTCTCAGG[T/C]ACTCACACCTGCAGAAACCACACAAATTAGGGTACGCTCACACTACRCTA
Long Flanking Sequence:
ATGGACGAGTGAATGGAAAGGCAAAATCAGTTATGGATAAATGGATGGATGAATGGACTGAAAGGCAAATACAGTGATGGATGGATGAATAGATGGATGGAAAGGGAAATACAGGGATGGATGCATGGATGGGTGATGGAACTGTTTGTACAATATGTGTTTTACAGTATAATACAGCCCTTCATGTTCTTGACAGGTTTCATGAGACTCATTATTATTATGTGGTGCTGGGATACACTTGATTTCTGAGCTCACCATTGTAAACTGAAAGAAGAGAGCAAAAACACAAACCTCCAAGGACAGTTTACTGATGTCGTCTCATTTCTGTTCCTCTCAGACCCTCGGCAGGTTCAATCCTCTCCGCCCTGGTCCTATGAGCAGCCCTATCCTCCATACCTGAGCCAAATGACGTCTCCCTCCATCCACTCCACCACCCCGCTGTCCTCCACCCGTGCCACCGGCCTGCCCACCATCAGCGACGTGCCACGACGCCTCTCAGG[T/C]ACTCACACCTGCAGAAACCACACAAATTAGGGTACGCTCACACTACGCTATCCGGACCATGCCCGGGTACGTTTCTCAAATTGTTTAACAGGTGTGAGTGCTCTGAATCAGGCCCAGGCTTGACTCAGTTGGCCAGTCCTGACCCGGTTGCAAGAGGAATGCCAGAGCCCGGTTCAATTGTAGTGTGCAAAGTGCGTCTGAGCCTGAAACTGGAGACATGACGTCACTTTTATACTGTTTCATATGGATTTATTAATCATTCTTACTTTTCAATGCACATGAACTGTCGTGGTTTATTAAAAACACAAACCCTTCGCTGCACGTCAGCTGCACCTTCAGCAAACCTCCCAATACCTGCAGCACGAGGACTTTTATGATCGTTTATGAGCATTAAAAGTAATGGATCTGTTCAGCTAAATTTTTCCCTGCGTGTCACTGCATTCCAAATGACTAAAAATAATACAAAACAATATAACTAAAGCAATGTCCACTAGGGCTGT
Associated Phenotype:
Not determined