ZMP

si:ch211-15e22.3

Ensembl ID:

ENSDARG00000040048

ZFIN ID:

ZDB-GENE-090312-115

Description:

polypeptide N-acetylgalactosaminyltransferase-like 6 [Source:RefSeq peptide;Acc:NP_001139074]

Human Orthologue:

GALNTL6

Human Description:

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6 [Source:HGNC

Mouse Orthologue:

Galnt10

Mouse Description:

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 Gene [Source:MGI

Alleles

There are 6 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa10501	Essential Splice Site	Available for shipment	Available now
sa18048	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa10501

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
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Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000058574	Essential Splice Site	246	600	5	12
ENSDART00000139448	Essential Splice Site	246	600	6	13

Genomic Location (Zv9):

Chromosome 1 (position 38470186)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	37341642
GRCz11	1	38060820

KASP Assay ID:

2259-0828.1 (used for ordering genotyping assays)

KASP Sequence:

CTGGATTCTCATTGTGAAGCCAACATCAACTGGCTGCCACCCTTGCTTGG[T/C]GAGTCCAGWTATACAGTATATATNAAAAAAGAAAGAAAAATACCAACCCTG

Long Flanking Sequence:

ACTGAATGCAACTTAAGATAATATATTAACGCTGGGTCTGTTTGTCCTGATTAATATTCTAGAAACAGAGGACATTCACCGATTCATTTAAGTGTTAACAGCGGTGGAATCTTACGGGGTGTTAAACATTAATGCCCTTGAATTGGGCCGGCAGAATGGAGCAACAATTCGGAGATTAAATTACCGCACCACTGCACCGCGATCAATCTCCCTTCCCTTTAACTGAACACAAACCAAGACTTATGCCATTTCCTTTTTTGTATCAAGTGTGTGCTTTCTAGTAATTTTTACTCTGTTTTTTTTTTTTTTTCAGAGCACCTGAAGGCACATCTGGCGGAGTACATGTCCAGATTTCCTAAAGTCCGTATTGTGCGCACTAAGAAGCGAGAGGGTCTAATCCGCACACGACTTCTGGGAGCATCTGTGGCCAGAGGAGAGGTCCTGACTTTTCTGGATTCTCATTGTGAAGCCAACATCAACTGGCTGCCACCCTTGCTTGG[T/C]GAGTCCAGATATACAGTATATATAAAAAAGAAAGAAAAATACCAACCCTGGCAGCAACATGTACCCACAGATTTCTCTATTTTTCATGCCTATCACTGTGAGAAAACACAGGCCGCTGAAAATCCCACGGAATGTTCGTTGTGCTTATCTTTCTCTTTTGAATCTAGCAATTTCAAAATTCAATTGCTTTTTCGCATCCAAAGTCTTTGCCCCTGCAGTTGGTTGATTAAAAAAACAAAACGAATCCTCCATCTCCTTGTTTCTTGTCCGTGGCTTGTTCCTTTTATCACTGGAAAAAAAAAGCTTTTTTTATTTTCAGACTCATTGAGGATAGAATCTATAGTGTTCCCCACTGCGCCGCATAAGCATTGCAAATCCAGACAGCTTTTGATGTGCGTGGTCCTGTTATAAGATCTTTTAAAATGTCTACTTCAGCAAATGTTGCGCACATATTGACGCTCATTGATCTGATACCAGCTCATAGGCTTGATCTGTCTGTT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa18048

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000058574	Nonsense	543	600	11	12
ENSDART00000139448	Nonsense	543	600	12	13

Genomic Location (Zv9):

Chromosome 1 (position 38535158)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	37406614
GRCz11	1	38125792

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

ATCACGCTCTATGACTGCCATGGCATGAAAGGCAACCAGCACTGGAGCTA[C/A]AGGAAGGYAAAGCAAATWATCTGCTTGTCAATATTTTGTGACAGAAAGAA

Long Flanking Sequence:

AGACTAACCTTGATGAATCCCTCTGCAACTTAAGGATGCCATTCAACAAATCTATTTCTCTATTTCTCTGTCCACAGATTCGTAACGCAGCATCTGGCTTATGCGTCGACTCTAAACATGGCTCTACAGGCACTGAGCTCCGATTGGACAATTGTCTGAAAGAGGGCGCAGAGCGAACATGGGCACATGAGCAGGTACAATAATCTGCAATGCACATCACATATTTCAGTCAGAAATTTTCAGGTCTGAACCGCATTAGATGGCTGACTATGAATGTACACTCTACACTGATATGCGTGTTGACATGATACAGAGCTTCTTGAAACTGAGAGTATTGCTGTTCCCTGTGGTGGACAGATTTTCACGTTTGGCTGGAGAGAGGACATCAGGCCTGGAGATCCACTGCACACCAGAAAATTCTGCTTCGATGCTATTAGCCAGAACAGCCCTATCACGCTCTATGACTGCCATGGCATGAAAGGCAACCAGCACTGGAGCTA[C/A]AGGAAGGTAAAGCAAATAATCTGCTTGTCAATATTTTGTGACAGAAAGAATTTCAGGTTTAAGTCTATACTTATTTGAGTGGAAAAGCTCAACTCCACTCAAATCCCAATAGCATCCATGACCACTGTTTAGTTGTGTTACAAATTAAAGCAAATCTTTTACAGTTTATAATGTAACAACAGTTTCTGGATAAAAGATTAAGCAGTGTCTGACAAAAAGCCAACACCAAATAAAGCTGACTTCTCTCGATGTGGAGGAGCAGTGACTCTACTCCGAGCTCCTCCCACGTGACAGAGTTCCTCGCCCTGTCTATAAGGGTGCGCCCTGCCACCCTTCGGAGGAAACTCATTTCAGCCGCTTGTATCCGAGATTTTGTCCTTTCGGTCATGACTCAAAACTCATGACCATAGGTGCGAGTAGGAACGTAGATTGACCGGTAAATCGAGAGCTTTGCCTTTCGGCTCAGCTCCTTCTTCACCACAACGGACCGGTACATCGAC

Associated Phenotype:

Not determined