ZMP
tardbp
Ensembl ID:
ZFIN ID:
Description:
TAR DNA-binding protein 43 [Source:RefSeq peptide;Acc:NP_958884]
Human Orthologue:
TARDBP
Human Description:
TAR DNA binding protein [Source:HGNC Symbol;Acc:11571]
Mouse Orthologue:
Tardbp
Mouse Description:
TAR DNA binding protein Gene [Source:MGI Symbol;Acc:MGI:2387629]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa40779 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa40778 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa40779
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000058555 | Nonsense | 7 | 412 | 2 | 6 |
Genomic Location (Zv9):
Chromosome 6 (position 45883532)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 6 | 45944466 |
| GRCz11 | 6 | 45946348 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATTCATTCACCGTCAGCTCGACTGAGGAAAGATGGCCGAGATGTACATT[C/T]GAGTTGCGGAGGAGGAGAATGAGGAGCCGATGGAGATCCCGTCAGAGGAT
Long Flanking Sequence:
GAATTTCACACAGCAGTCACAGCAAACCAAATATAAACTGAAAAAATACTTTTAATGTTCTTAAATATTAGTATATGGTTGAGTACAGAGTGTGTATGTATACGTATACAAAAACAAAATCGAATATTAAAGTACCTTAATAGCAGAAATGTTGGTAACTTTCTGTAGAGCATCATCATCATTATTAGTTTTTATGTGTATTGTAGTTTTCTGTACGAATAAAAAGAAAGTTGAAACTGTTGCAAACAGAAGGATTTCTCAAAAGCATTTATTTTCTGTTTACTAATTCGGATCTCACGACCAATCTAAGTTTTTTTTTTAAATGAGTGCTGTGAATTTAAACATTTTGCTTTTAGTTTTTTTTGCATATTTTGTTATGGTCATTTTTTATGAGATATTACTGTCTTTTTTGTTTTTGTCTTTTTTGGCTAATGGAAACAATAATTTTACTATTCATTCACCGTCAGCTCGACTGAGGAAAGATGGCCGAGATGTACATT[C/T]GAGTTGCGGAGGAGGAGAATGAGGAGCCGATGGAGATCCCGTCAGAGGATGATGGCACGGTTTTGCTTTCCACAGTGTCCGCTCAGTTTCCAGGGGCTTGTGGTCTGCGCTTCCGGAGCCCAGTGTCTCAGTGCATGAGGGGGGTTCGTCTGGTGGACGGCATTCTGCATGCACCTGAGAACGGCTGGGGAAACCTAGTCTATGTGGTTAATTACCCAAAAGGTATGTGGTACAATTAATATACTAAGCCCAATTTAAAAAATGTTTTTAGAAAGCATCCTGAAAACATGCACAATTGCACACTTTAAAAAATAAAATATCATTTATAATCTACCTTTTTCTCCTCTAATGCATGGTCACAGTTTTCAGTTCATCTTTATTTCTGTTGTGCTTTTTAAAATGTAGGTTGTGTTAAAACAGCTTGGCATAGGTGGCAAAAAAATAGAATAAAACCTCTGATTAATTTAAATTTGAACATTACAGCAAGTCAGACAAGCAAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa40778
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000058555 | Nonsense | 360 | 412 | 6 | 6 |
Genomic Location (Zv9):
Chromosome 6 (position 45876406)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 6 | 45937340 |
| GRCz11 | 6 | 45939222 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAATCAGTCGGGTACTTCAGGCACAAGCACAAGTGGCACCAGTTCCTCT[C/T]GAGACCAAGCCCAAACATATAGCTCGGCTAACAGCAATTACGGCAGCAGC
Long Flanking Sequence:
TTTGTCACCTTTGCAGATGACCAGGCAAGTCATGTTTTACATGATAAAATCACAGATAAAGAGCTGAGGCATTCCTAATGAATGTACTTTTCAAAAATGACCTGTTCATGACAACATTCCAGACCATATTGAAGAAATTTCCAACTTCTTTCCAGGTTGCCGCCGCTTTGTGTGGAGAAGATCTGATCATCAAGGGCGTCAGTGTGCATATCTCAAACGCTGAGCCCAAACACAATAACACTAGGCAGATGATGGAGCGGGCAGGGCGCTTTGGGAATGGGTTCGGAGGTCAGGGTTTTGCAGGCAGCCGAAGCAACATGGGTGGTGGTGGTGGGGGTAGCTCCAGCAGCTTGGGAAATTTTGGCAATTTCAATCTAAACCCGGCCATGATGGCTGCCGCCCAGGCTGCCTTGCAGAGTAGTTGGGGTATGATGGGAATGCTAGCTCAGCAGAATCAGTCGGGTACTTCAGGCACAAGCACAAGTGGCACCAGTTCCTCT[C/T]GAGACCAAGCCCAAACATATAGCTCGGCTAACAGCAATTACGGCAGCAGCTCAGCTGCTCTCGGCTGGGGCACCGGCTCTAACTCGGGCGCTGCCAGTGCTGGCTTTAACTCCAGTTTTGGCTCTAGTATGGAGTCCAAGTCATCGGGGTGGGGTATGTAAGTGCTTTGTGTTTGAAGTGTCGGTATTCCTAGCGTGTTTTGGTAAGTATTTTATTTCGAGAGACTTATCTCATCACGTGTGTTTGGGAGTGGGGATGGGTGAAAAGAGGGAGTCTGGGGACGAAACAAAGAAAAAAAGAATGTTTTGTACACTGAATGGGATTTGAGTTAGTGTTTGAAGTGAGATGTTAACAAGGGTGCTATGTTAATGTACCATCTTTGATGTTTAGTTTTTTTCTCCCCAATGTTGTATTGTCTTGACTGATGCAAACAAAAGCATTTCAACTGGATTCTTATAATGCATGTTCAATCTGTGAAAATGCATGAGTTGCATCATTTA
Associated Phenotype:
Not determined