Busch Lab

ZMP

ENSDARG00000039462

Ensembl ID:
ENSDARG00000039462
Human Orthologues:
COL9A1, COL9A2, COL9A3
Human Descriptions:
collagen, type IX, alpha 1 [Source:HGNC Symbol;Acc:2217]
collagen, type IX, alpha 2 [Source:HGNC Symbol;Acc:2218]
collagen, type IX, alpha 3 [Source:HGNC Symbol;Acc:2219]
Mouse Orthologues:
Col9a1, Col9a2, Col9a3
Mouse Descriptions:
collagen, type IX, alpha 1 Gene [Source:MGI Symbol;Acc:MGI:88465]
collagen, type IX, alpha 2 Gene [Source:MGI Symbol;Acc:MGI:88466]
collagen, type IX, alpha 3 Gene [Source:MGI Symbol;Acc:MGI:894686]

Alleles

There is 1 allele of this gene:

Allele Name Consequence Status Availability
sa43205 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa43205
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000057652 Nonsense 183 347 5 9
Genomic Location (Zv9):
Chromosome 19 (position 4514037)
Other Location(s):
Assembly Chromosome Position
GRCz10 KN150230.1 9084
GRCz11 KN150230.1 9084
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGACCGTCACCTTCCCAGGCCTTTCCGTGCTCTTCAACACCAAATGGCAC[A/T]AAGTGATGGTGGGCGTGGAGAAGGAGCTGGTGACGCTGTATGTGGACTGT
Long Flanking Sequence:
CAGTGGTAAGCAATGTCGCCTCACAGCAAGAAGGTCGCTGGTTCAAATTCCTGCTGGGTCAGTTGGCATTTCTGTGTGGAGTTTGGATGTTCTCTCCATGTTGGCGTGGGTTTCCTCGGGTTTCCCCCACAGTCCAAACACATGCGCTATAGGTGAATTGGATGATCTAAATTGGCCGTAGTGTATGAGTGTGCATGAGAAACAGCCACTGCATCACTTTATACAACCATATTGAACTGTATGTGTTTTCCACTAGGCTGAACTTTCCCAGAGGCTTCCCAGATGAGTATTCCTTCATGACCACCTTCCGCATGATCAAGAACACCGTGAACAAGGTGTGGAACCTGTGGCAGGTGGTGGACGAGGATGGACTGAAGCAGGCCGGGATGCGTCTTAACGGGGATCAGCAGGCTCTGGAGTTCTTCCTCACCACCCTGGAGGGAGATGTGCAGACCGTCACCTTCCCAGGCCTTTCCGTGCTCTTCAACACCAAATGGCAC[A/T]AAGTGATGGTGGGCGTGGAGAAGGAGCTGGTGACGCTGTATGTGGACTGTCACCAGGTTGACCAGAAGGAGATCAAGAGGAAAGGTTACGTCAACACAGAGGGAGACACTCTGATCGGGAGGCTGGATTCGGACCCCAACACTTCTGTAGTGGTGAGACTCCACACTCTGAGCTTCAGGATTTCTCTAGGTTTTTTTTTTTTAAATCAGTTTGTTTGGTTATAATGTGTTACCGGCAGCACTTTAAGATCTTTTTGAGTTTTCTGTTTTAATTATAATGTATAGAAAAAAGGTCAGACATAAGTTAAATTTATAATTACATTTAGTCAATTTGCAGAATCTTTTTATCCAAAGGGATGTACAAATGAGGATAATAGAAGCACTTTAGGTCATTTAATTTATTGATTTAAAAAAAAATTAATAAATAAATAAAATTTAATAAAATAAAATAAAACTGAATTAAATTAAATTAACTTTTAATTTAATTTAATTTAATTTAAT
Associated Phenotype:
Not determined