ZMP

snrpb2

Ensembl ID:

ENSDARG00000039424

ZFIN ID:

ZDB-GENE-060616-2

Description:

Snrpb2 protein [Source:UniProtKB/TrEMBL;Acc:Q6PBZ6]

Human Orthologue:

SNRPB2

Human Description:

small nuclear ribonucleoprotein polypeptide B [Source:HGNC Symbol;Acc:11155]

Mouse Orthologue:

Snrpb2

Mouse Description:

U2 small nuclear ribonucleoprotein B Gene [Source:MGI Symbol;Acc:MGI:104805]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa38298	Nonsense	Mutation detected in F1 DNA	Not yet available
sa39694	Nonsense	Mutation detected in F1 DNA	Not yet available
sa15176	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa38298

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000057601	Nonsense	26	229	1	6

Genomic Location (Zv9):

Chromosome 1 (position 52203922)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	51075606
GRCz11	1	51709970

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TCATGGACATCCGGCCGAATCACACCATCTACATCAACAATGTTAATGAT[A/T]AGATCAAGAAAGAAGGTAAAGTCTTTCGTTTGTACTGTAACTTGCGTCTA

Long Flanking Sequence:

TCAAATGGCCAATCACAAATATTGATAAACTTGATCTTAGGTGCTTTTTGAATTCAAAAATGTTGCTAGGGTAGTATATGAAAAGTTGCTAAACCTAGCAACGAAAAGTCCTAGCAATAGTGTTAGTATCACTCCGCGACAACAGGTGGCGCAACAAGCGAAACCCGATTCACAACAATAAAGGAAACGAAGAAGAAGCGAAGCGCCAGTTTCCGCTTAAATCCAGAAGTGTGGTGAGTCCGTTCATTCACTTTTATTGTGATTTTTAAATCTATCAATAAGTTGTTTCACGTTTATAATTTTATAGAGCTGCACTCAGTGTCATTTCAGGCATCTCAGAAGGCTTAAATGGGAGACACTGCGAGTGTTTTGTGTTTGTAGTTCCTCGTTGTTTATTGTACTGGATCTCTTATGTGTTTACTGCAGGGACATTTTACCTCAGTTTATTAATCATGGACATCCGGCCGAATCACACCATCTACATCAACAATGTTAATGAT[A/T]AGATCAAGAAAGAAGGTAAAGTCTTTCGTTTGTACTGTAACTTGCGTCTATATGTGGAAAAGCTTTGACATTTTTGTTTGTCTTTGCTCATTGAAGTATGTTTGAGTTAATTAGTAAAGGGCTTTTCACAGTAATAATTGCTCCACATCAGTTTTAAAGTTAAGATTGGGGTAAAGTTGCTTTTATATTATCTCCTTCATCATATAAATCCAGAAAAAAATGGTTTGCAATTTCTAAATGAGGAAATGTATTAAACTATTCAAATCAAACTAATCAAAGTACATTTCTCACGGTCAATTAAATGGTGCTAATGTTGTGTTAATCGTTTCTACAGAGCTGAAGAGGTCACTGTACGCCTTATTCTCGCAGTTCGGCCAGATTATGGACATCGTGGCTCTGAAGACCATGAGGATGAGGGGTCAGGCGTTTGTGATCTTCAAGGAGCTTTCAGCAGCCACCAATGCCCTCAGACAGCTTCAGGGATTCCCCTTCTACAATAA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa39694

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000057601	Nonsense	39	229	2	6

Genomic Location (Zv9):

Chromosome 1 (position 52203563)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	51075247
GRCz11	1	51709611

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TAATGTTGTGTTAATCGTTTCTACAGAGCTGAAGAGGTCACTGTACGCCT[T/A]ATTCTCGCAGTTCGGCCAGATTATGGACATCGTGGCTCTGAAGACCATGA

Long Flanking Sequence:

TGCGAGTGTTTTGTGTTTGTAGTTCCTCGTTGTTTATTGTACTGGATCTCTTATGTGTTTACTGCAGGGACATTTTACCTCAGTTTATTAATCATGGACATCCGGCCGAATCACACCATCTACATCAACAATGTTAATGATAAGATCAAGAAAGAAGGTAAAGTCTTTCGTTTGTACTGTAACTTGCGTCTATATGTGGAAAAGCTTTGACATTTTTGTTTGTCTTTGCTCATTGAAGTATGTTTGAGTTAATTAGTAAAGGGCTTTTCACAGTAATAATTGCTCCACATCAGTTTTAAAGTTAAGATTGGGGTAAAGTTGCTTTTATATTATCTCCTTCATCATATAAATCCAGAAAAAAATGGTTTGCAATTTCTAAATGAGGAAATGTATTAAACTATTCAAATCAAACTAATCAAAGTACATTTCTCACGGTCAATTAAATGGTGCTAATGTTGTGTTAATCGTTTCTACAGAGCTGAAGAGGTCACTGTACGCCT[T/A]ATTCTCGCAGTTCGGCCAGATTATGGACATCGTGGCTCTGAAGACCATGAGGATGAGGGGTCAGGCGTTTGTGATCTTCAAGGAGCTTTCAGCAGCCACCAATGCCCTCAGACAGCTTCAGGGATTCCCCTTCTACAATAAACCCATGGTCAGTGCCACAGCTCCTATTCCTATCAAGGAACTACACCTGAAATGATTATCACTTCAGAAAATGAAGCAGTTTGGGGCTTTTGATTGACTTTAAAGAGATAGTTCACCCAAAAATTTGAAATTGAGTAAATGGGGAGTAAATTTTCATTTTTGGGTGAACTATTCTATTGACTTTTTGTTTTATTTATTAATTTGATTAAAGATATAGTTTTTCTGCCTTTTTGCCTTATTAAGTAGATAGGACAGTACTATAGACAGGAAGTAAAGTGGAAGAGAGACAGGGTAGGGACGAGAAATGTCCTCGAGCTGGGATTCGAACTCAGGATGCCTTGAAGTGCTACTGCACCATA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa15176

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

A > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000057601	Essential Splice Site	177	229	6	6

Genomic Location (Zv9):

Chromosome 1 (position 52196454)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	51068138
GRCz11	1	51702502

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

AWCAAACCAGACATATTTKCTGTTTAYTCATTGGCYTTATTTTATTTTTT[A/T]GGTTTCCTGGGTTTAAAGAAGTGYGTTTGGTGCCTGGAAAACATGATATT

Long Flanking Sequence:

TTTTTCTTTCTATAAATCGAGTGGGAAGCATTAAATGCAGTGTCTGCCTTTAATGGTACACATAACTTTTGTGAAAAATAAATGACATGTATAAAATAGTTTAACTTTTCTTGTATATTAAAGAATAAACGATCATTCTAAATGTCATTACCTTTAAACGATGAGACATGGATGAAACCTAGTGATTTGAAGGATAGTGGAAACTATACCAAGGTTTAAAATGATAATAAATGAGTATTTTGCACTTTTTTTAAAATTTGTAGTCAAATCATTTTTGCTCAGTGTGGCTGACAAGATTTTTTATGTATAAACTACTGTGACACTGATTGACATTTTACCTAGTGTCTTCTGTAAATCAGGGTAAAAATGATAAATAAGGAACAGAAGAAGAATAAATGAATAAATAAACTAGCTAATGGACCATTATTTTAAAGTGTTACCCAAAAAACAAACAAACCAGACATATTTTCTGTTTACTCATTGGCTTTATTTTATTTTTT[A/T]GGTTTCCTGGGTTTAAAGAAGTGCGTTTGGTGCCTGGAAAACATGATATTTCGTTTGTAGAGTTTGAAAGCGAAGCTCAAGCCGGAGTGGCGAAAGATGCACTTCAGGGGTTCAGAATCACAGCCACGTGTGCCATGAAGATCACTTATGCCAAAAAGTGATTTGGCACTGACGCCTGTTTGTCAAGAACCAAACATTTTAATGGACTTTACCTGAGGATTATTACTAATGAGTGAATCCTCGACTTTTATTTTATTTTTTGTCTTTTTCAATTAGTTTTATTACTGTTCTTCCTTTTTTTGGTATGGATCTTACTTGGTCACTAAGAACATTTTAATATTCCAGGATAGATCTTTATTTTGTACTGTGGACTGAAAAAGTTAGCCTATAAAATAAATGTCATCTCGCCCACCCATGTAACTGACGTTTTTATTTTTGTTTTTTACCTTTTTAAAAAGCACTGCATAGATGTTCTGTTTCTTTCAATCTAAACTGCATTT

Associated Phenotype:

Not determined