ZMP
smc4
Ensembl ID:
ZFIN ID:
Description:
structural maintenance of chromosomes protein 4 [Source:RefSeq peptide;Acc:NP_775360]
Human Orthologue:
SMC4
Human Description:
structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:14013]
Mouse Orthologue:
Smc4
Mouse Description:
structural maintenance of chromosomes 4 Gene [Source:MGI Symbol;Acc:MGI:1917349]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa35784 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa35784
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000056765 | Nonsense | 416 | 1289 | 9 | 25 |
| ENSDART00000130413 | Nonsense | 416 | 1289 | 9 | 24 |
The following transcripts of ENSDARG00000038882 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 15 (position 1547171)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 1587056 |
| GRCz11 | 15 | 1551965 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGCGCGAGAAGCTCAAACACACCAAGAGCAAAACCAAGAAACTGCAGAAA[C/T]AGCTTCAGAAAGACCAGGAGAAGGTGAGACTTTATGATGACCACAATCCA
Long Flanking Sequence:
TGTTCGTTGAGTTTAAATAGACACACGGTCACTGGAGTGTTTTAAAGCCACATAGATAAGTTGATTGATCAGCGGATCGCTTGTATGTCGGCTCATAAACAGACCAGCTGATTGACACAGCTTTGAAACACTCCAATGCTTATGTATCTGTGTTTACACTTGGTGAACCTTCACAGTCGTTTCTGTTGAGCATGTGAACACAATAGGCAATCGGTGGTGTTCAGGAACAAGCTCAACAGCGCTCAAATGTTAGCGGGAAATGGAGGTTTTTAAAATACCACTACTGATTGGTAACAAACTCCATACTTTGACAATCCTACTTGTATAGTTTCATAATTCAGGTATTTTGTGAATGTTGTTTTTCCTGCTAAAGAAAATTGACCAAGCTGACCAAGTACATCGAGAGCCAGAAGGAGAAGTTCACCCAGCTTGACCTGCAGGATGTGGAGGTGCGCGAGAAGCTCAAACACACCAAGAGCAAAACCAAGAAACTGCAGAAA[C/T]AGCTTCAGAAAGACCAGGAGAAGGTGAGACTTTATGATGACCACAATCCATGGTCTTGCAATACGAAATGGAGTCAGATCCAGATTGAATACCCTGATGGTCCATATCCGGAACAGAGTCTGGACTTTGAGAAGCCCTGCACTAGAGTGTTTATCATGCACATACAGTTGAATTCATAATTATTCACCCTCCTGTGAATTTTTTGTTTTCATTCTCAAATATTATCTCAAAATAATATTAAAGCCATTTTAAGGTCAATATTATTTGCCCCCTTAAGCAATATTTGTCTTGGATTGTCTCCAGAACAAACCACTGTTATACAATGACTTGCCTAATTACCCTAACTTTACCCTAATTACCCTAGTGAAGCCTTTAAATGTCACTTTAAGCTGAACACTAGTGTCTTGAAGAATATCTAGTCTAATATTATGTGCTGTCATCATGACAAAGAAAATAAATCAGTTATTAGAGATGAGTTACTAAACTATTATAATTTGAAA
Associated Phenotype:
Not determined