ZMP
bre
Ensembl ID:
ZFIN ID:
Description:
BRCA1-A complex subunit BRE [Source:UniProtKB/Swiss-Prot;Acc:Q568D5]
Human Orthologue:
BRE
Human Description:
brain and reproductive organ-expressed (TNFRSF1A modulator) [Source:HGNC Symbol;Acc:1106]
Mouse Orthologue:
Bre
Mouse Description:
brain and reproductive organ-expressed protein Gene [Source:MGI Symbol;Acc:MGI:1333875]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa23156 | Nonsense | Available for shipment | Available now |
sa28910 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa14574 | Nonsense | Available for shipment | Available now |
sa36490 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa23156
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000056742 | Nonsense | 37 | 386 | 2 | 12 |
ENSDART00000137091 | Nonsense | 37 | 71 | 2 | 3 |
ENSDART00000143714 | Nonsense | 37 | 71 | 2 | 3 |
Genomic Location (Zv9):
Chromosome 17 (position 41243802)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 41129430 |
GRCz11 | 17 | 41084745 |
KASP Assay ID:
2261-1435.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCTGCTCTATAGTGAGGAATGGACGGGTTGGTTTGGATTCATCCAGCTG[T/A]CTCCGGATTACTGACCTCAAGAGTGGGTGAGTGTTCTGTGAACTCTACAA
Long Flanking Sequence:
CATAATGTGATTGTGTCTCAGTCTACATGATTCACACTGTTTTTGGGAAGCCAAATAATTATAATATGGTAATAAAAAGAAGAAAAAAAGGAAGAAGAATACCTTAATTCATATAATCCTTATGATTAAGATTTATTCAACAGTCACTGTATGGCTGACAGATGTTTTTAAATGTTTGTGTTTTCCATTTTTTTATTACATGTATGTACATTTGATTTGTTATTGTATGTATTTATCTGCATGGCATATTTTTGTTCATCGTATTTGCTTATACTTGTTTTGTTTTCTGTATTTGCCTATATATGTTTCTATATTTTTGTACACAACTCAAAGAATTACTTTGTGTTAAAAATGTATTATTGTTATTATTGACAGAGCCTTGTTGGGAAGATGAATAGTCTCTCTCCAGAGTTGGCATTGAGCCGTATTTCTCCTGAGCTGCGGCCTTTACTCTGCTCTATAGTGAGGAATGGACGGGTTGGTTTGGATTCATCCAGCTG[T/A]CTCCGGATTACTGACCTCAAGAGTGGGTGAGTGTTCTGTGAACTCTACAAAAAATAGATAACTTTTGGAGAACAGCGTAATTGTAGGTTGTCTATGTTGATATGAGTAATTTCTTTAATATAACCTTAATCAGAATTCTAGAAAACTGAAGGGACTTTCCAGCAATGATCATTAAGGATCTTATTCTTGGCCACTGTATGCCTTTATCCCCCCCATTAAAACATAACTTAAGTCTGGTTTATTACAATTAATTTCAGTTTCTCTGGCCAAATGCCAGTTATAATTAATGCCATACCTGTGTGCAATCAAGAAATCACTTAAATACAACCTGCCTGACAATGTGAAGTAGACCAAAAGATCCTCAAAATCTTTGCATCATTTCGAGATCCAAAGAAATTCTACACCGCAAAATCCTCCAAGTAAAATTTACTCAGTTTAGATACCGTTGAAGTCTGAATTATTAGCCCTCCTTTTAATTTTTATTCTATTTTAAAATATTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa28910
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000056742 | Essential Splice Site | 46 | 386 | 2 | 12 |
ENSDART00000137091 | Essential Splice Site | 46 | 71 | 2 | 3 |
ENSDART00000143714 | Essential Splice Site | 46 | 71 | 2 | 3 |
Genomic Location (Zv9):
Chromosome 17 (position 41243830)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 41129458 |
GRCz11 | 17 | 41084773 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGGTTTGGATTCATCCAGCTGTCTCCGGATTACTGACCTCAAGAGTGGG[T/G]GAGTGTTCTGTGAACTCTACAAAAAATAGATAACTTTTGGAGAACAGCGT
Long Flanking Sequence:
GATTCACACTGTTTTTGGGAAGCCAAATAATTATAATATGGTAATAAAAAGAAGAAAAAAAGGAAGAAGAATACCTTAATTCATATAATCCTTATGATTAAGATTTATTCAACAGTCACTGTATGGCTGACAGATGTTTTTAAATGTTTGTGTTTTCCATTTTTTTATTACATGTATGTACATTTGATTTGTTATTGTATGTATTTATCTGCATGGCATATTTTTGTTCATCGTATTTGCTTATACTTGTTTTGTTTTCTGTATTTGCCTATATATGTTTCTATATTTTTGTACACAACTCAAAGAATTACTTTGTGTTAAAAATGTATTATTGTTATTATTGACAGAGCCTTGTTGGGAAGATGAATAGTCTCTCTCCAGAGTTGGCATTGAGCCGTATTTCTCCTGAGCTGCGGCCTTTACTCTGCTCTATAGTGAGGAATGGACGGGTTGGTTTGGATTCATCCAGCTGTCTCCGGATTACTGACCTCAAGAGTGGG[T/G]GAGTGTTCTGTGAACTCTACAAAAAATAGATAACTTTTGGAGAACAGCGTAATTGTAGGTTGTCTATGTTGATATGAGTAATTTCTTTAATATAACCTTAATCAGAATTCTAGAAAACTGAAGGGACTTTCCAGCAATGATCATTAAGGATCTTATTCTTGGCCACTGTATGCCTTTATCCCCCCCATTAAAACATAACTTAAGTCTGGTTTATTACAATTAATTTCAGTTTCTCTGGCCAAATGCCAGTTATAATTAATGCCATACCTGTGTGCAATCAAGAAATCACTTAAATACAACCTGCCTGACAATGTGAAGTAGACCAAAAGATCCTCAAAATCTTTGCATCATTTCGAGATCCAAAGAAATTCTACACCGCAAAATCCTCCAAGTAAAATTTACTCAGTTTAGATACCGTTGAAGTCTGAATTATTAGCCCTCCTTTTAATTTTTATTCTATTTTAAAATATTTCCCAAATGATGATTAACAGAGCAATGAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa14574
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000056742 | Nonsense | 334 | 386 | 11 | 12 |
ENSDART00000137091 | None | None | 71 | None | 3 |
ENSDART00000143714 | None | None | 71 | None | 3 |
Genomic Location (Zv9):
Chromosome 17 (position 41418901)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 41304529 |
GRCz11 | 17 | 41259844 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCTTTGTACTTCCCTCGAGATCAGCCCACCCTGACGTTTCAGTCCATCTA[T/G]CACTTCACCAGCAGTGGRCAGCTCTACTCTCAGGTGCAAAAATCCTACCC
Long Flanking Sequence:
GAGTTTGGAAGAAACTTGTAACATTTTAATAATATTTTGGCAAATTGAACGAGTAGAACGAAATGACTCTAAAAATGATTCGTTCATCTCACAACAAGACTCAAGGGTCCGAGTCAGTAAAATGATCTGAACTTCCCATCACTACCCTCCGTTCGCAGAAAACGCACATCACGTGACCACACACACACACACACACAGTCATGCACTCCTCTTAGATTTTTAGCTTTCATATTCGGTCAACATCTTAATTTCAGAATTTAGAATTCAAATTGACATACTGTATATGACTGGTTTTGTGGCCCAGGGTCACATATTACTAATAGGTCTGGGTTGGATTTACTGTATGTATTGTGATGCAATAAACTTCTAGCACTGGTTTATGGTGGCATCTGTCAAGTTCTGGACGATCTGTATTTGATTTCTCCATCCTGTCTTCCTGTAGTGGATCTGCCTTTGTACTTCCCTCGAGATCAGCCCACCCTGACGTTTCAGTCCATCTA[T/G]CACTTCACCAGCAGTGGGCAGCTCTACTCTCAGGTGCAAAAATCCTACCCCTACAGTCCACGCTGGGATGGGAACGAGATGGCCAAACGAGCCAAGTAAGAGCAAATGAATAATGAATATTGCCAACACAGATCAAAAGAGTTTTCTCTTAGTTAAACAGATGTGTGTGTTTTACATTTCCAATTCCTGTGTAATATTAACCCAGTTTAAAGGGATAGTTCACCCCAAAATGACTGCAGAGTTTTCAGTTTTAGATGAAAATGAAATAGGCTTGTGTATTTTTGTTTTGTTGAACACAAAAGAAGATATTTTGAAGAATGTTGTAAGCCTGTAACCATTGACGACTGCTATGGAAGAACATTCTTCAAAATAACTTCTTTTGTGTTCAACAGAAACAAAAAAATATATGGAAAAACTGAGCAAATCCTGAGAGAGTTTTCAGTTTTTGCGTGAACTGTCCCTTTAAGGGAGTCTTCTGGAGGTTAATGGAATGTGCAGTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa36490
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000056742 | Nonsense | 356 | 386 | 11 | 12 |
ENSDART00000137091 | None | None | 71 | None | 3 |
ENSDART00000143714 | None | None | 71 | None | 3 |
Genomic Location (Zv9):
Chromosome 17 (position 41418966)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 41304594 |
GRCz11 | 17 | 41259909 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGGCAGCTCTACTCTCAGGTGCAAAAATCCTACCCCTACAGTCCACGCT[G/A]GGATGGGAACGAGATGGCCAAACGAGCCAAGTAAGAGCAAATGAATAATG
Long Flanking Sequence:
ACTCTAAAAATGATTCGTTCATCTCACAACAAGACTCAAGGGTCCGAGTCAGTAAAATGATCTGAACTTCCCATCACTACCCTCCGTTCGCAGAAAACGCACATCACGTGACCACACACACACACACACACAGTCATGCACTCCTCTTAGATTTTTAGCTTTCATATTCGGTCAACATCTTAATTTCAGAATTTAGAATTCAAATTGACATACTGTATATGACTGGTTTTGTGGCCCAGGGTCACATATTACTAATAGGTCTGGGTTGGATTTACTGTATGTATTGTGATGCAATAAACTTCTAGCACTGGTTTATGGTGGCATCTGTCAAGTTCTGGACGATCTGTATTTGATTTCTCCATCCTGTCTTCCTGTAGTGGATCTGCCTTTGTACTTCCCTCGAGATCAGCCCACCCTGACGTTTCAGTCCATCTATCACTTCACCAGCAGTGGGCAGCTCTACTCTCAGGTGCAAAAATCCTACCCCTACAGTCCACGCT[G/A]GGATGGGAACGAGATGGCCAAACGAGCCAAGTAAGAGCAAATGAATAATGAATATTGCCAACACAGATCAAAAGAGTTTTCTCTTAGTTAAACAGATGTGTGTGTTTTACATTTCCAATTCCTGTGTAATATTAACCCAGTTTAAAGGGATAGTTCACCCCAAAATGACTGCAGAGTTTTCAGTTTTAGATGAAAATGAAATAGGCTTGTGTATTTTTGTTTTGTTGAACACAAAAGAAGATATTTTGAAGAATGTTGTAAGCCTGTAACCATTGACGACTGCTATGGAAGAACATTCTTCAAAATAACTTCTTTTGTGTTCAACAGAAACAAAAAAATATATGGAAAAACTGAGCAAATCCTGAGAGAGTTTTCAGTTTTTGCGTGAACTGTCCCTTTAAGGGAGTCTTCTGGAGGTTAATGGAATGTGCAGTATTTACCTTTGGACTTCTCTCCCAGCCACACCTCATAGCTGGAGAGCACATTTTATCCAGAGTGTG
Associated Phenotype:
Not determined