ZMP
tnnc1b
Ensembl ID:
ZFIN ID:
Description:
slow-specific troponin C [Source:RefSeq peptide;Acc:NP_001002085]
Human Orthologue:
TNNC1
Human Description:
troponin C type 1 (slow) [Source:HGNC Symbol;Acc:11943]
Mouse Orthologues:
AC154446.1, Tnnc1
Mouse Descriptions:
troponin C, cardiac/slow skeletal Gene [Source:MGI Symbol;Acc:MGI:98779]
troponin C, slow skeletal and cardiac muscles [Source:RefSeq peptide;Acc:NP_033419]
troponin C, slow skeletal and cardiac muscles [Source:RefSeq peptide;Acc:NP_033419]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa29906 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa29906
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000054664 | Essential Splice Site | 106 | 161 | 5 | 6 |
Genomic Location (Zv9):
Chromosome 23 (position 20400678)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 20185785 |
| GRCz11 | 23 | 20112128 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAAAGTTGGCCTCAAAATCTATTGCAAAACCACGTTTTATTGTCCTGTTA[A/C]GAAATGGAGATGGTTACATTGACTTGGATGAGCTGAAGAACATGCTGGAG
Long Flanking Sequence:
TAATATGTATCTTAAAGATATCTAGATCATTAGGTACTAACATGCAGGGCATAGCAGACATTTTAAAAGTATGTGTCTGTGTGTGTGTGTGGGGGGGGGGGGGGGGTGTCTTGAGATCTTAAAGTTTATGTTCATGTAATTATTAATCACCTGTTAAATGGCCTGTCTCTAAAAGTAAGGGGGACATATCCCCCCATCCCCCCTGGTTGCTACGCCCCTGCTAACATGTATGTGACAGCTTTTGTATTTTTATTTCCGAAAGTGTATAAATTGGGATTTGATTGTTCACTGGTGGTCTCTGTGGGATGTAGGGAGTGGGACAGTAGACTTTGATGAGTTCTTGGTCATGATGGTGCGCTGTATGAAAGAGGAGAGCAAAGGAAAATCAGAAGAAGAACTGGCTGAAGTCTTCCGCATGTTTGATAAGTATGTATTTTTATCAAAGCATGTTAAAGTTGGCCTCAAAATCTATTGCAAAACCACGTTTTATTGTCCTGTTA[A/C]GAAATGGAGATGGTTACATTGACTTGGATGAGCTGAAGAACATGCTGGAGTCCACAGGTGAGGCCATCACTGAGGATGACATCGAGGAACTCATGAAGGACGGAGACAAAAACAACGACGGCAAGATCGACTACGACGGTAAATTCATATAACAACCACTTTATTATGGATATTTACTCAAAATAAACATTTCGACAACTGATTAGCATTTACCTTACATCCCAACAGAGTTCTTGGACTTTATGAAGGGTGTCGAGTAAAAACCCGCCAAGTGAAGCCATTTCATTCCCTGAACCAATGCTGCCTGCCTCTCTGACGTCACCACACGGACACCTAATTAGAAAGCACGGAAAATGATCTGCATTTCATTTAGTTCTGAAAGGTTGTTGAAGTGAATCAGTCTTGTCATACTGCTGCCCTAATTATTCGTGTTATTTGTGCTCAAGTAAAAACCTTTTCTGTACACAATTGTTTTTTTGTTTTTTTTGAAGATAATGTAC
Associated Phenotype:
Not determined