ZMP

pknox1.2

Ensembl ID:

ENSDARG00000036542

ZFIN ID:

ZDB-GENE-020123-1

Description:

Pbx/knotted 1 homeobox 1.2 [Source:UniProtKB/TrEMBL;Acc:B8A551]

Human Orthologue:

PKNOX1

Human Description:

PBX/knotted 1 homeobox 1 [Source:HGNC Symbol;Acc:9022]

Mouse Orthologue:

Pknox1

Mouse Description:

Pbx/knotted 1 homeobox Gene [Source:MGI Symbol;Acc:MGI:1201409]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa9775	Essential Splice Site	Available for shipment	Available now
sa45083	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa9775

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000053097	Essential Splice Site	71	335	2	8
ENSDART00000125032	Essential Splice Site	128	402	4	10
ENSDART00000130607	Essential Splice Site	128	445	3	10

Genomic Location (Zv9):

Chromosome 1 (position 47472722)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	46284383
GRCz11	1	46975615

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GAAGGAAGGCAAGGCTTTCTTCAGCGAGGACCCTGATTTGGACAATCTGG[T/A]ATGAAGCACCTTGTTGCATCTAAAATGACATTKAAGTTTCATCACCATTG

Long Flanking Sequence:

AGATTTTTTTTTTCAGAGACTACAGGCTGTCATTGAGGCTAATGGTGACCCAACAAAGTGTTATTTGTGTCATGCTAAATGTCAGAAATATTTTTGGTTTGATTTTCTATTAGAGTTATCTGACTTTGTCAAGATGAATTTGTTCTTGTCGTTTTATGACCATTTTCTAAACTATAGCTAATTAACTGTGATCATGTTTCATTATATAATTTATGTGTACCTTCATTGCTTTGTATTCAATGCATCTGCCAACTGCTTGCAGAAGTGTAAATGTAATCTTTGGCGTGTTCTAGAAAGTGCATCCTTCGCTGTGTTTGTTGACTGTAGACACCCGCTGTTCCCCCTGTTGGCGCTGCTCTTTGAGAAATGCGAGCAGTCCACTCAGAGCTCGGAGTGCGTGACCTCGGCCAGTTTCGATGTGGATATCGAGAACTTTGTGCGAAACCAGGAGAAGGAAGGCAAGGCTTTCTTCAGCGAGGACCCTGATTTGGACAATCTGG[T/A]ATGAAGCACCTTGTTGCATCTAAAATGACATTGAAGTTTCATCACCATTGGTAATCAGCAGCGCTTAGTTTAATGCATCCTTATTCAATAAAAGTGAGTTTCTTAAATAAACATTTTGTTCAGGAATGTGTGACGTATATGTTGTTGGTCAATTGTTTTATATGTACAATCAAGCTTAAAACCATTCATACCCCTGGCAAATTCTGTCATAACGTTTTTGTTCATATGTAAATCATAGCTGAGATTTTTTTTTCCACAATGATGCCACATCAAAGTCCCGTTAAGGCAAGTCATTTCACTCAATAATTGTGGGCTTGACTGTATATATAAATGATCTTTTTTAACAATTAGATTTTGTTTGTTCTTTTTAGCTTGTAAAAGTACACATTCCGAATAATTTAGAGCTCTAAACGTGGGAAGCTTGTACGAAATTATCAAGAAAAATTCAAATACATTAATAGTAATATTTTAGGGGTCCTACTAGTATTAAAAATGTTATT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa45083

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000053097	Essential Splice Site	166	335	4	8
ENSDART00000125032	Essential Splice Site	223	402	6	10
ENSDART00000130607	Essential Splice Site	223	445	5	10

Genomic Location (Zv9):

Chromosome 1 (position 47470864)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	46282525
GRCz11	1	46973757

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ACAGGGCAATGTTACTGTCACAGCGGTCAACCCCACACAGATGGTAACAG[G/T]TTGGTTGTTTTACTCCTTTACTTTTCTTTTCAAGTCTGATTTGCATATTT

Long Flanking Sequence:

TATTTACTTGTGTAAATGTGTGTCAATCTATATTTATTCAGTTTTTTAAATAATTTCAGTAAAATTATTGACTAATGTGACCATGTTAAATGTTCAATGTACAATGATTTATGTACAATGCACGTCTTTTACTAGATATATTATATGAGAGACTTGCTTTGTTTACCAACCATATAAAGTGAATCTAATTGAATTTGCATTTTAAACATTAAATACACGTTAAAAATATATTATTTTTTATTTCATATTTTAAAGTTTTAGTTATGATACTCCCAAAATAATTCCGCAGAAATCCGCAGACTTTTACCAAAATTCTTAGCAGAAATAGCAAAAAACGTCCGCAGATTCCGTCTGGCCCTACTCATTGCATGTGTTTTTCTCACAGCCGCAAAACCCATTCACTGGAGCCATGAGTCCACAAGGTATCGTAGTGCCAGCATCTGCTTTACAACAGGGCAATGTTACTGTCACAGCGGTCAACCCCACACAGATGGTAACAG[G/T]TTGGTTGTTTTACTCCTTTACTTTTCTTTTCAAGTCTGATTTGCATATTTCTTTGCAGGTCACACTTGACAATAAGGTTTCATTTGTTTATGTGTTTACTAACATGAACTAATAACGACCAGTACTTGTACAGCATTTATTAATCATAGTTTAACATTTACTAATGCATTATTAAAATGCAAATTCATGCTAATTAACAAATTGGAGTTAATATGAACCAACAATGAACGACACCATTAGCTAATGTTAACATACATTAATAAATACTGTAATAAATGTATTGTTCATTGTTTGTCCATGTTAGTCAATTCATTCATTCATATTCTTTTCGGCTTAGTCCCTTTATTAATCTGGGGTCGCCACAGTGGAATTAACCAACAAACTTATCCAGCACGTTTTTACGCAGCTTCCAGCTGCAACCCATCTTTGGGAAACATCCACACACACTCATTCACGCACACTAATACACTACAGACAATTTAGCCTACCCAATTCACCTG

Associated Phenotype:

Not determined