ZMP
GPC6 (3 of 4)
Ensembl ID:
Description:
glypican 6 [Source:HGNC Symbol;Acc:4454]
Human Orthologue:
GPC6
Human Description:
glypican 6 [Source:HGNC Symbol;Acc:4454]
Mouse Orthologue:
Gpc6
Mouse Description:
glypican 6 Gene [Source:MGI Symbol;Acc:MGI:1346322]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa8472 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa8472
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000052984 | Nonsense | 352 | 499 | 9 | 11 |
Genomic Location (Zv9):
Chromosome 9 (position 55351796)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 53828267 |
| GRCz11 | 9 | 53367864 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGCTGAAGCATTTCCRGTCGTTCTGGGTTTCTCTGCCGCTGGTTTTCTGT[A/T]AGGAWGAACAGATTTCAGCAGATGGACAAACTGAAGATCAGCAGTGCTGG
Long Flanking Sequence:
TTTTATTTTATTTTATTTTATTTTATTTTATTATATTATACTTTATTTTATTTTATTATACTTTATTTTATTTTATTTTATTATATTTTATTTTATTTTATTTTATTTCATTTTATTTTATTTTATTATATTATACTTTATTTTATTTTATTATACTTTATTTTATTTTATTTTATTTTATTATTCTTTATTTTATTTTATTTTATTTTATTTTTATACAGTAGAACATTCCAATCTCAAACAACTAACACTAATTATACTTAGATTTCTAGCAATAGCAGTCAGAGAACCATCAACAACTGAATATCTTCACTCACCATGTAGAAAACCAGCCAAAACCTGTTGTGCAATAGTCAATGTTTTAAGTGTTAAGCTGATTCAAACGTCGAGTGTTTCATCACTGACTTGTTTTATCACTGCTGGTCCTCAAGGTGTCTGAGATGAAGGAGAAGCTGAAGCATTTCCAGTCGTTCTGGGTTTCTCTGCCGCTGGTTTTCTGT[A/T]AGGATGAACAGATTTCAGCAGATGGACAAACTGAAGATCAGCAGTGCTGGAACGGACATCACAGCGGCAGGTGAAGACCCTCATGTGAGCCCGCAAACATGCGAGATTCAGAGATTCACACTCATATCTCAAGCAGTGTTGGGTGTAATGAGTTAAAATGCCTAGATACTAGGGCTGAACAATATATCCTTTAAGCATTGATGTCGCAGTGTGTGTATGTCTGTCGCCTCACAGCAAGAAGGTCGCTGGTTCGGGTTCCGAAAGTTTGCTTATTTAATTCCCCTATAGCACATGTGTTTGGACTGGAAAACCGGAGCACCCAAAGGAAACCCACACCAACATGGGGAGAACATGCAAACTCCACACAGAAATGCCAACTAGTCCAGCCGGGGCTCGAACCAGCAACCTTCATTCTGTGAGGCGACAGTGCTAACCACTGAGCCACCGTGCCGCCTAAAATATTATAATGCAACAAAAATTTAAAAACTAAATTTTATATA
Associated Phenotype:
Not determined