Busch Lab

ZMP

zgc:112329

Ensembl ID:
ENSDARG00000036338
ZFIN ID:
ZDB-GENE-050731-5
Description:
vacuolar protein sorting-associated protein 11 homolog [Source:RefSeq peptide;Acc:NP_001032797]
Mouse Orthologue:
Vps11
Mouse Description:
vacuolar protein sorting 11 (yeast) Gene [Source:MGI Symbol;Acc:MGI:1918982]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa12276 Essential Splice Site Available for shipment Available now
sa6174 Nonsense Mutation detected in F1 DNA Not yet available
sa34930 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa12276
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052787 Essential Splice Site 48 927 1 16
Genomic Location (Zv9):
Chromosome 10 (position 30659616)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 29882020
GRCz11 10 29768360
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATGGGMATATCGGCCTGTGATTCAGGCCGAGGAYACATTGTGCTCGGAGA[T/A]ATCCTTAWAATGCTTGTKGCTAGTTAGCAATGATGATACTGTCAAACAGY
Long Flanking Sequence:
TTCTTATCTTTTTATGTGGTTAAATATATGCTTGTAACGTTTCTGCTGTTACTATAATTAACACCTTCACCCATGATGATAAGAAATAAAGTTCTCGGTTCAACAGTTCAGTGATGAACCGAATTTGTTCATGAACCGCCAGGGGACTCAAAGGAACGATTTGTTCGTTTAGATTTTTATTACGTTTTCGCGTCATATTAATAACTTTTAAAAGCACCCTTTTCAGTCAACTAAAGTGTTCTTAATTTTTTTTTTCTTATTTTTATAGCGTCAAAAACTGAAAAATATCATCCTGCCTCCAGTCACATGACCGTAATGCGAGTCACATGATTTTGCTAAACAAGAACTGCTCAGAAAATGGCAGCGTTTTTACAGTGGAGACGATTTGTGTTTTTCGATAAAGAAACTGTGAAGGATCCGAGCGAAAATGGGAAAAACTTCCAGCTACCGATGGGCATATCGGCCTGTGATTCAGGCCGAGGACACATTGTGCTCGGAGA[T/A]ATCCTTAAAATGCTTGTGGCTAGTTAGCAATGATGATACTGTCAAACAGTAATACCCAGTGTAATTCATAACTATAGTCGTACAATCTGCATGTTTTAAAAGGCCGCTGCAAACCTGCTTTATGAAATGTAAACTACATTTGACTAAATGTCTGTGTTTCCTTTATTTATTCATTTTACCATATTCTGTCATCCATAGATGGAGGTAAAGTTGGTGTTATATTCGCACATTCGTTCAGTGATAACGTCCCTACATTATTTACCGCGCTATTGTGAATATTCAGTCTGAAGTCGCATGCAAACATGACTTCAAAACAACATTAGCACTATTTAAATGACTGAACAGTGTTGTACTTTAATAGTCATTGGCTGCAGATATGATTTTCCTATTAAGAATTTGCAAATACTTTTCTGAAATTATATTATTAAGGAGAAAATCTGAATGTGCGAATATACAACCAAATCTATCTCAATCATCCCTAGCTGATCATATAGAGATTC
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa4375
Status:
Allele not cryopreserved
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052787 Nonsense 668 927 12 16
Genomic Location (Zv9):
Chromosome 10 (position 30650834)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 29873238
GRCz11 10 29759578
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTCGTGCTCTGCCAGATGCACAACTTTAAAGAAGGAGTGCTGTATTTGTA[T/A]GAAAAGGGCAAACTGTGAGCGAGCTTTCTCATTCTCACACAAAGTGTTTT
Long Flanking Sequence:
CTTCATTACTTAATGTATTTACTAACATGAACTAATTACGATCAATACTTGTACAGTACAGCATTTATTAATCATAAAACATCATTGAAATCCAAATTCATGCTTATTAACATTGGCTAAGACACTATGAGTTAACACAAACTAAAAATGAACAACAATTAGTATTTTCATTAACTAATGTTAAATAACAATAATAAATACTCTAATAAATAGTCGTTCATGTTATTAAACATTAACTTGTACAACCAGATTGTAAAATGTTAAGATGCACCCAGAATAAGTGAATCTCTAAAATAAAAAAGGCAGTTTGGATTGATTGCTGACTAGCTTGCTTTAAAAGCCTACAGTGAACCCTTCTGTCTCTCTGTCTGTGTCTTACAGAAGAAAAAAGTCCTGCAGGAGGCAGCACTCTCCCTTCTGAGGAGCGACAACACTGTGTTTGACAAGGCCCTCGTGCTCTGCCAGATGCACAACTTTAAAGAAGGAGTGCTGTATTTGTA[T/A]GAAAAGGGCAAACTGTGAGCGAGCTTTCTCATTCTCACACAAAGTGTTTTGAATGTACCCGGCATGACTCCTGAAACATCACAATGTTATTTATGAAAATTATTACATTTTGAAAACAAAAACTAGTTTCCAATAGCAAGCAGCATGAGCTAACATAACTAAAAGTAACACACATTTAGTCAAGTTACAAACAGCTGCACACACACTAATGATACAAAATACTTACCGCAGGTATCAGCAGATCATGCATTACCACATGCAGAATGAGGAGTATGGGAAAGTGGTGGAGGCCTGTAAGCGCTATGGGGACAGCGAAGTGTGCTTGTGGGAGCAGGCACTGGGCTATTTCGCACGCAAAGAAGAAAACTGCAAGTCCTACATTAGTGAAGTCTTGAAGCACATCGACGACAATAACCTGATGCCTCCGCTTCTGGGTGAGTGAGAAGTCAGACAAAGGCCAAACAAGTTAGGTGACATGGCCGGTGTTTTCACACATCTAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6174
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052787 Nonsense 711 927 13 16
Genomic Location (Zv9):
Chromosome 10 (position 30650488)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 29872892
GRCz11 10 29759232
KASP Assay ID:
554-5273.1 (used for ordering genotyping assays)
KASP Sequence:
AAGCGCTATGGGGACAGCGAAGTGTGCTTGTGGGAGCAGGCACTGGGCTA[T/A]TTCGCACGCAAAGAAGAAAACTGCAAGTCCTACATTAGTGAAGYCYTGAA
Long Flanking Sequence:
GTGAACCCTTCTGTCTCTCTGTCTGTGTCTTACAGAAGAAAAAAGTCCTGCAGGAGGCAGCACTCTCCCTTCTGAGGAGCGACAACACTGTGTTTGACAAGGCCCTCGTGCTCTGCCAGATGCACAACTTTAAAGAAGGAGTGCTGTATTTGTATGAAAAGGGCAAACTGTGAGCGAGCTTTCTCATTCTCACACAAAGTGTTTTGAATGTACCCGGCATGACTCCTGAAACATCACAATGTTATTTATGAAAATTATTACATTTTGAAAACAAAAACTAGTTTCCAATAGCAAGCAGCATGAGCTAACATAACTAAAAGTAACACACATTTAGTCAAGTTACAAACAGCTGCACACACACTAATGATACAAAATACTTACCGCAGGTATCAGCAGATCATGCATTACCACATGCAGAATGAGGAGTATGGGAAAGTGGTGGAGGCCTGTAAGCGCTATGGGGACAGCGAAGTGTGCTTGTGGGAGCAGGCACTGGGCTA[T/A]TTCGCACGCAAAGAAGAAAACTGCAAGTCCTACATTAGTGAAGTCTTGAAGCACATCGACGACAATAACCTGATGCCTCCGCTTCTGGGTGAGTGAGAAGTCAGACAAAGGCCAAACAAGTTAGGTGACATGGCCGGTGTTTTCACACATCTAAACTTAAGAGTTACTTTTAACGCCTTTTGTTTAGTGGTCATGTTGATGAATTTTCCAACCTCTGAATGAACTTGGGCTTCTGCCCGTATCAGATTTTCTGTTGCTGACATTTTATCACAGTATACAGTGTTATTAAGCTGCAAAAAAGATTACTTTAACAGGTATAACAAGGTAAGAGTAACAAAGTAAGAGTAAACAAATGTTTTCAACACATTAAATTGTTAAAAAGATGACAAAATACAGAACAATAATCAATATATGGACTTATCGCACAACACATGGACATAACCTCCATCATTTTTGGTAATTCAATATACACTCACTGGCCACTTTATTAGGTACACCTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa34930
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052787 Nonsense 845 927 15 16
Genomic Location (Zv9):
Chromosome 10 (position 30645772)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 29868176
GRCz11 10 29754516
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAACACTGCTTAGAGAGCTTCGCTGAGAGTGAGGCAGAGTGTCCCACCTG[C/A]ACCCCTGAGAACAGGAAGGTCATGGACATGTTGCGTGCGCAGGATCAGAA
Long Flanking Sequence:
TTATTGAATACCGGCAGATGAACTTTACATTACATAATTGTGTTTTCCATATTTGCTTCAGCACAATTTAGACCTTATTCGATTGTGTGTCTTGCAGTGGTGCAGACTTTGGCCCATAATTCCACAGCATCTTTATCAGTCATCAAAGACTACCTGATTAATAAACTGGAGAGGGAGACCCAGCAGATTGAGGAAGACGAAAGGAAGATTCGCCAGTATAGAGAAGAGACGGCTCATTTACGGTCTGAGATACAAGAACTTAAAACTTGGTAAGCAAATGGAGGACGCAACCAACCAATCAGAATCAAGACTGGGAGTGCACTGTGAATGTATAGTTAAAATGTGCATTGTTCTTCTAGTGCAAAGATCTTTCAGAAGACCAAGTGCAGCATGTGCAACAGCCCGCTCGAGCTGCCGTCTGTGCACTTCCTGTGTGGCCACTCTTTCCATCAACACTGCTTAGAGAGCTTCGCTGAGAGTGAGGCAGAGTGTCCCACCTG[C/A]ACCCCTGAGAACAGGAAGGTCATGGACATGTTGCGTGCGCAGGATCAGAAACGAGATCTGCATGACCATTTTCACAGACAGGTGGCTATTTTGGGGCTATTTTAAGAGGTTTTGGGCCAGATTTACAAGCAAGGGGAAATCAGATAGATATCACTATCCTGTTAAGAGTGCGAAGCTCTGTGGGTGCTTCTAATGACAATAAACTAATTAAAGGGATAGTTCAACCAAAACTGAAAATGAAAGGTGCAGTGGGTGAGTGTCTTTAGAATTATATAGTTGAACAACAAAACCTCAGCAAATAGCGCTTTTCTGCCTAGCCTGCTTTACTGAGCTGAAGTTGGTTTTATATTTACATTGTTTCATTTGTGAACAATGTCAACCTGTGACGCTCTCCCTATACTGTTTAACATGCTACTCTAAATATTCGCTCTAAAAAATAGCATGTAAGTATGGCTTAGTAATAAGTGTATTCCTGCACGCCGCCGGTCAACCACTAAGCA
Associated Phenotype:
Not determined