ZMP
acana
Ensembl ID:
ZFIN ID:
Description:
Aggrecan [Source:UniProtKB/TrEMBL;Acc:Q75ZI2]
Human Orthologue:
ACAN
Human Description:
aggrecan [Source:HGNC Symbol;Acc:319]
Mouse Orthologue:
Acan
Mouse Description:
aggrecan Gene [Source:MGI Symbol;Acc:MGI:99602]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa40999 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa7281 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa31591 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa40999
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Founder:
SL7_04_B10
KASP Assay Location:
Unknown
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000003690 | None | None | 308 | None | 8 |
| ENSDART00000005288 | None | None | 287 | None | 7 |
| ENSDART00000017467 | Nonsense | 717 | 1831 | 14 | 28 |
| ENSDART00000132881 | None | None | 169 | None | 3 |
| ENSDART00000147879 | None | None | 344 | None | 4 |
Genomic Location (Zv9):
Chromosome 7 (position 50234011)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 48504247 |
| GRCz11 | 7 | 48777023 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAATAAAGTGTTACCAATATGATTTATAAAATAATTCATTAAATATTTGT[C/A]ATTTTTATATATAGAGGATCTGGATCTTCCCCTGAATGAAAGTGAATCGC
Long Flanking Sequence:
TCTCGAGCCAAAAAGATTCAAATGGCAGCGCCCGCTCGTCGGCGGAGAATAAGGTCAATAAGCAGCTAATTAGTAGTTTATTAAGCTTACTGATTTGTTTATACAGTGGCATTGTGGCTCAGTGGTTAGCACTGCCGCCTCACAGCAAGAACTTCACTGGTTCGAGTCCCAGCTGGGACGGTTTGCATGTTCTCCCCGTGTTTGCGTGGGTTTTCTCCGGGTGTTCCGGTTTCCCCCACAGTCCAAAGACATGTGGTATATGTGAATTGGATGAACTGTTTGAGAGAGTGTGGATGTTTCCCAGTTCTGAGTTGTGGCTGAAAGGGCATCCACTGTGTAAAACATATGCCGGAATAGTTGGAGGTTCATTCCACTGTAGTGACCTCTGATAAATAAGGGACTGAGCTGACGTAAATTGAATGATTTATTAAAACAGTGAAATGTGACTTAAAATAAAGTGTTACCAATATGATTTATAAAATAATTCATTAAATATTTGT[C/A]ATTTTTATATATAGAGGATCTGGATCTTCCCCTGAATGAAAGTGAATCGCAAGAGACAGTGACGGAGGAAAAGATAGTGAGCATTTCATCCCATCCTGCTCTTCACAGACCTGGTAATATGTCTTAGGATACATACATGAGTCAGTGCCAGATAAATAAATATTTTTGAGGTAAGCATAAATCAGCTGATTCGAATGTTATCACTCAATTGAATGGGCATTATCAGTGGTTTTCACCAGATAGATATGGGCCAGTATGGGCCTTCTGCGCCTACTAGTAGGCTATAATCATCCAGCCACCTGGTTAATCAGCTATAGATCACATACGACTGCGGCCGAAAGTTTTTAAAGTTTTCAAGATTTATTATATTATTTATTAAATTTCTCATAAATTGTATTTTATTAACGTCTACCCCTACCCCAACCCTAAACCTAACCGTCACATTAATGTAAAAACATCTGGAGTCTTTTCTATTGGTATTGCAGCATTCTGAGCCTACT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa7281
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Founder:
SL4-55, SL4-59
KASP Assay Location:
Project 554.35, Plate 6, Well A02
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000003690 | None | None | 308 | None | 8 |
| ENSDART00000005288 | None | None | 287 | None | 7 |
| ENSDART00000017467 | Nonsense | 1241 | 1831 | 18 | 28 |
| ENSDART00000132881 | None | None | 169 | None | 3 |
| ENSDART00000147879 | None | None | 344 | None | 4 |
Genomic Location (Zv9):
Chromosome 7 (position 50236983)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 48507219 |
| GRCz11 | 7 | 48779995 |
KASP Assay ID:
554-4482.1 (used for ordering genotyping assays)
KASP Sequence:
GGCTAGTAGTGATGTCATCTTCTTCAGCAATAATGACMTGGTGGAAATGT[C/A]AAAMAAGCCACTTCAAGGAMTGGAATTAGGAAGAGGGGAAGTGGAATATA
Long Flanking Sequence:
GATATCTTCATTTTTAACAGAACAAGAGCTGGGTAGTGGTCAAGTCGATTTCAGTGGATCAGGACTTTTCTCAGGGTCTGGGGTGAGTGGTGATATCTCTGGCTTAAGTGGTGAAATCTCTGGATCGAGTGGTGATAGTTCAGGTATAAGTAGTGACATTTCAGGAATGAGTGGTGATATCTCAGGAATGAGTGGTGATATCTCAGGAATAAGTGGTGATATTACAGGAATGAGTGGTGATCTCTCTGGTATGAGTAGCAGTGACCACAGTGGCTCAGGGAGTGGTTTAGCATTTTCTGGGGTGACATTTTTGGGGTCAGGCTTCACTGATCTCACAGAACAATCTCGTGAACAGGAAGCTTCTGGACTTGTGTTCTTTGGGTCTGGTGAGGGAAGTGGATTTAGATCTGGAGGCTATGCAATTGAATCAGGGGAACGATCAGGGGACTCGGCTAGTAGTGATGTCATCTTCTTCAGCAATAATGACATGGTGGAAATGT[C/A]AAACAAGCCACTTCAAGGAATGGAATTAGGAAGAGGGGAAGTGGAATATAGTGGCACAGTCAGACTGTCCTCAGGGAGTGGAGATGACCAAAGTGTCTTTATAAGCGGGCATGAATGGATCCCAGTCACTGCTAATACACCATCTGTAAAATCCACTGATCCTCCCCCAGCTGAATTATTTGATCAAGGTCCATCAGACCTGTACAGTGATACTGCAGGACACCTAGGTCCTTATTTAAAACCAGAAGAGATCATCAACAATCTTGACGCTGTTCCTTTGGCAGCTTTGTCTTCTACTACAGAAACTGCCTCTTTACAGAGGCCTGCTGTCGTAGAACGACCTGCTGTGAATGGTGAGTTTTCTATTGCATATTATATAATTGAGATGTATGGCCTCTTTACTATATCATTTTTATGTTCTATTTTCTTTTTACCTAAACTACCATAATAGATTATCTTAACCCATGTGAACCAAACCCTTGTGGAGCTGGTGTGTGTTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa31591
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Founder:
SL6_05_A3
KASP Assay Location:
Unknown
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000003690 | None | None | 308 | None | 8 |
| ENSDART00000005288 | None | None | 287 | None | 7 |
| ENSDART00000017467 | Essential Splice Site | 1539 | 1831 | 22 | 28 |
| ENSDART00000132881 | None | None | 169 | None | 3 |
| ENSDART00000147879 | None | None | 344 | None | 4 |
Genomic Location (Zv9):
Chromosome 7 (position 50238040)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 48508276 |
| GRCz11 | 7 | 48781052 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTGTGTGAGTGCTGATCTGCACCTCTTAAGAGGCTTTCAAACTGATGCC[A/T]GATCAGCACTTCTACAGTAACCACAATTGACTCTAATCTCTCTATCAATG
Long Flanking Sequence:
GCCAGTTTGGTGAGTCGGACTGATTTAAAACATAAGTTATATCAAAGAGATTTATAAAGTCACATCAATTATGCTAATTTTTATAGTTTTTTTTTTTTATTAATTGTTTTATAGTCTGATATTTGTGGTAAATCTAATCAAATTGTTATCTCAATGTCTCTTGGTTGGCATTTCATTTGTGAATAACTTCACTTCTGTTCAGTTTGCTCATGCCTATGCCCTCACAGCTGATTTCACAGGTTATGTGGCATGTGTGTGGTTAAGTAATTGTACACTTTCTCAGCTCTTGTGTCCAGATGTCTTTTCAGTGACTGTTCACCTGTGTTGTTTTTGTTCAGCTGTGCCTTTGCTGCAGTCTGGTTTAATCAGCACGCCTGCTAACATCTGGTACATGCTCATACTTCTTGTCTATCTTCACATGAATCTGAACTCTGAAATTCTGCTTCTGGTACTGTGTGAGTGCTGATCTGCACCTCTTAAGAGGCTTTCAAACTGATGCC[A/T]GATCAGCACTTCTACAGTAACCACAATTGACTCTAATCTCTCTATCAATGTACCACAATTTCCTGAGCGTGACTCTCCTCAGCCTTTCAAAATATTGATGGTATAATTACTCAAGAGATTGGCTTACGGTGTAGAAGCAAGAGTTCTGATTCAATGATGCTCTCTGCTAAGCTTGACCTTCCTCGGGGCATCTTTATAGTTGGCAGCTTTAATTGCTAAACCTTTATTTGCAGAGGTTGATGTATGCCATTCAAACCCTTGCGCCAATGGAGCCACCTGTGTGGAGGTAGAGGACACTTTCAAATGCTTATGTCTGCCCAGCTACGAAGGAGACCGGTGTGAGACTGGTATGAGGCTGCTTCCGCTAATTCTACTAACAGTCTTTCAAAAACATCCTCTAGATGTCACTGTGGTGAATTCAGTGAAACTGTAAGGGTATATTTGTGTGGGTGGTGGGAAACTTTGATGTTTTTTTGGGGAAGTGTGTGTGGGGTCATTCC
Associated Phenotype:
Not determined