ZMP
zgc:152816
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC777712 [Source:RefSeq peptide;Acc:NP_001071228]
Human Orthologue:
MATR3
Human Description:
matrin 3 [Source:HGNC Symbol;Acc:6912]
Mouse Orthologue:
Matr3
Mouse Description:
matrin 3 Gene [Source:MGI Symbol;Acc:MGI:1298379]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa40602 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa40601 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa40602
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000051831 | Essential Splice Site | 216 | 904 | None | 22 |
| ENSDART00000097267 | Essential Splice Site | 216 | 914 | None | 20 |
| ENSDART00000114395 | Essential Splice Site | None | 271 | None | 11 |
| ENSDART00000132868 | None | None | 363 | None | 10 |
Genomic Location (Zv9):
Chromosome 5 (position 71129932)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 67162303 |
| GRCz11 | 5 | 67840014 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGCCCACATCCACCTCCCAAAAGACCCTACAGCTCCGACCCTTTCGCAGG[T/C]AAGCAATTTCCCTTCACATCAATTATTAATGATTATTTTTAGTTAATTCT
Long Flanking Sequence:
GACACAGATCACTGCCTATTCACGAGTCCCGCAGAAAAAAAGTGATTGACAGGTGGTAATTATGTGTGTATCTTACCTTTATTCATTTACTATATGATTTGTTTATGGGTAAAACAAAGACCATGCAGGTCAGGTAGTTTAAACGGTAGTTTAAATAATTAATTGGTCATTAATTAATTAATTATTCATAATCGAAAATCAAATCGAATTGTGCCTTTAGAATCAAAAATGTAATCGAATCGAGGATTTGGAGGATCGTGACACCCTTATTCCTTACATAGATTTTTTGGTCCAAATCTCTAAAAATTCGTAAATTATAAGGCATTTTCTGCTTTTATCATTTGAAATTGTTGTTTGTGTTCTGTTTTCTTGCCCCTTCAGACATGGAAAGAGCATCTTTCAGGTTCTCGCCACAAATCACATGACTCACAGTCCTCTCAACGAAGTTCTCGCCCACATCCACCTCCCAAAAGACCCTACAGCTCCGACCCTTTCGCAGG[T/C]AAGCAATTTCCCTTCACATCAATTATTAATGATTATTTTTAGTTAATTCTTAGTTGCTTCATTTTATAAAGCTGATCATATCATAAATCAATAAAGGTCGTCATGTAATTTTTGCCACTAGAGGGCGTGTATTCACAACAAACAAAGGTGACGTTTGATGTATGGTAAATCTTTTTTTTTACATTTGTAAAAACTGAACCGATGTGTAATGTAAAGAACAGTATGTATTTTTCGCCACTAGAGGGCGAATATTCACAACAAACAAAGGCGTAGTTTGCTGTATTTTAATCGTGTGTTTTTTTTACATTTCTGAAAACTGAAGCAAAATAAAGAAAAATCCATTATTAAAAATTAAACCACAACAAAAAAGCAAACTCTTTTTCTTCCCCAGCTTCCTGCTTCATAAGAAATGAATCAGCTCATGAAAGAAATCTGGCTCCTTTAAAATCATTTGAATGTCGCACAAATAAGATCAGATTTTTTTTTCTGAAAACACTGTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa40601
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000051831 | Nonsense | 365 | 904 | 7 | 22 |
| ENSDART00000097267 | Nonsense | 372 | 914 | 8 | 20 |
| ENSDART00000114395 | Nonsense | 150 | 271 | 8 | 11 |
| ENSDART00000132868 | None | None | 363 | None | 10 |
Genomic Location (Zv9):
Chromosome 5 (position 71125991)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 67166244 |
| GRCz11 | 5 | 67843955 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTTGCATGCGTTTACAGCAGTGTTGTTTGTGTGCTTCCAGGCCTTGATC[G/T]AGATGGTTGACTGGCGTGATGCTGACATCATGGTGAAGTATTATTACAGT
Long Flanking Sequence:
TGTGTATGTACGTATGTATATGTATATATATATATTTTTTTTTATATATATATGTATATATATATATGTATGTATGTATGTGTATATATATATATATATATATATATATATATATATATGTATGTATGTATATATATGTATATATATATATAAATATATATGTATATACATATATATATATATATATATATATATATATATATATGTGTGTGTGTATATATATATACATACAAGACTAATCATGCTTAAAATTCAGCTTTAAACCATAAGAATGAATTTCTTTTTAAACAGCATTCATTAAATTATTTTAGTTAATTTTGCAATAGCATTTCACAAGTTCAGAGCATTTATTTTAACTTATACTTTTTTAAATGCATTCTTTGTGTGCAGTATATTTATCTTGCTGGTTCCAAACTTTTGACTGGTAGTGTAGACTCGCTGTGTTTGATTAGTTGCATGCGTTTACAGCAGTGTTGTTTGTGTGCTTCCAGGCCTTGATC[G/T]AGATGGTTGACTGGCGTGATGCTGACATCATGGTGAAGTATTATTACAGTAACCCTCTGAAGATTCAGGGCAAAAGCATCAAAGTGACTATGTCCTACATCAAAAGCCTGCGGTAAGATGCTTCCGATATCTCAAACCTTAAAAAAACTTATTTAGACCAGTGTATGGCAGTGCAAACATGGGTGGTGGTAGGTCTGTTCTGAAAATGTCATGGACATGTTAGAACAGATTAAGTCTAAAATTTTAGATCCTGTCAGAAATTAGAATATCCGTTTTGACCGATATTTAGACAACCAGCCATCAAAGTTGTCTAACACCTATTAGCTGTAACAGCGAGTGTTGTCTGGTGTCCAAAACGACATTATCAGCCTTCTGTCAGCCAAGATGTTGACTGTAAAAACTAGAGAAGAACAGAAGATGAAGTAATGATGATGAAAATAAGCAAGTCAAACATTTTAGATGACAAAACTGCAGGAAAAACGTAGCATAGTGTTAAAAAA
Associated Phenotype:
Not determined