ZMP

si:ch211-246f9.1

Ensembl ID:

ENSDARG00000035655

ZFIN ID:

ZDB-GENE-060503-223

Description:

RAD21 homolog [Source:RefSeq peptide;Acc:NP_001038585]

Human Orthologue:

RAD21

Human Description:

RAD21 homolog (S. pombe) [Source:HGNC Symbol;Acc:9811]

Mouse Orthologue:

Rad21

Mouse Description:

RAD21 homolog (S. pombe) Gene [Source:MGI Symbol;Acc:MGI:108016]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa14114	Essential Splice Site	Available for shipment	Available now
sa44925	Nonsense	Mutation detected in F1 DNA	Not yet available
sa10727	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa14114

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
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Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000051717	Essential Splice Site	230	637	5	13
ENSDART00000132800	Essential Splice Site	230	637	6	14

Genomic Location (Zv9):

Chromosome 19 (position 45588408)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	44486630
GRCz11	19	44082203

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GGATGACTTTGGAGACAATCCAATGGAGAGCACTGAAGGAGGCATGCTGG[G/A]TAATAGAGGCATCTATAATATYCYCCGMTGTATAGGCTTTRTGTGGATTA

Long Flanking Sequence:

TGTTTCTCAATGTTTTTACACTACATTATTTGAATCTACCAAGCTTAGTTTACAATGTTTACACTGCTCTACTTACATTAAATCTGAATCCCAAATTTATGAAATGACAACAGATTGTTCAGATTTATTTAATGTCAGTTTTAATGTTATATGAGTTTAAACGTCAAGTTGTGAATGACAGCTATAAACGTAAATTAAATTGTCATTTTACTTATATTTAACTTAAAAAGTTGATCACATGTATTCCCTAATATAGTAGCTGATATTTGACCGACATATTTTCTTGATAGCTGATTTTGGGATGGACGACCGGGAGATGATGCGGGAGGAAGGTGCATTTGAAGTGGACATCATCCACGGAGCATCTGCATCAAACCTGCTGCTGGAGTCAGAGTCCAGTAGCGTACAGATCGCTGACAAAACCAACCACCTGGAGTACGACCAGTACAAGGATGACTTTGGAGACAATCCAATGGAGAGCACTGAAGGAGGCATGCTGG[G/A]TAATAGAGGCATCTATAATATCCCCCGCTGTATAGGCTTTATGTGGATTATGGTTTTGGACTATCAAGATGTGTTTTTGCTCGCATTTTTTGCAAAAGCCTGAAGTCCAGCTTTATAATGCTTTTGATACTGATCTGCTTTCTGTATCTGCAGTGGACAAGCTGCTCAGCAATGAGGACGGAGGGGGTATTTTTGACGATCCTCCAGCCATACCTGAAGGTGTGATGATGCCCCAAGACCACGGTGCAGATGACGACGATGATTTTGACAACCTTTCACGTAAGAAACATATAACATAAAATATGTTAACATTAGGGCTGGTCAATACAACAGTATTACTGCAGAATGAAGTGTGTGCCGTAAAGTAATTTTGTATTCAGTGTATTATTACAAACCCCTGATGTTAGTCTAGGGGATGGTGGGGTTTGACATTTGTGTAATTAAAGTATATTTATATAAACAGTGAATAAGTGCAAAAGACAACCAAAGTAATACCAAAA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa44925

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000051717	Nonsense	297	637	7	13
ENSDART00000132800	Nonsense	297	637	8	14

Genomic Location (Zv9):

Chromosome 19 (position 45584394)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	44482616
GRCz11	19	44078189

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CTGATTCTGGCCCTGTGGAGCCTTTGCCCACCATGACAGACCAGACTGAA[C/T]AGACCACACTAGTCCACAATGAAGAGGAGGCCTTTGCTTTGGAGCCCATC

Long Flanking Sequence:

TTACTTACCTGGGATATATTGTATATCTGTGAGAATATGTTACTTCAGTTTCTTAATGTTACCTTATTTATAATCATATCGTCTGTTAAAAAACAACTAACTGTGAAATGTGATGTACAGTGAAATTTTTAGTTCATCTTTTGTTTACTATATTTATGTTTAAAAATCAAATACAACATAATCAAATAAGATCAAATCCTTTTCTTTTCTTAAATACTCAAGCTTATTTATTACATAAAGTGTTTTTGTACATTTTCTGGAATTATTACCTTTATAAAATCCTATATCATGAAAGATATCGTTACCTTAACATTAAATAAACTTTCTCATACTTCTTAAATAAAATTTTGGTCATCCAGCCCTAGCCAATATCTATTTTATGTCTGGTACTTTGCATAGTAATTTTATTTCTTACATTTCATCCGATAGCTGCAGGAGGTCCAGACAGCCCTGATTCTGGCCCTGTGGAGCCTTTGCCCACCATGACAGACCAGACTGAA[C/T]AGACCACACTAGTCCACAATGAAGAGGAGGCCTTTGCTTTGGAGCCCATCGACATCACAGGTCAGTCAGAAGAGAAAAGTAGTAGCACAGGGCTCTGAATGTGGCTTTTAGTCCAGTCAGCAAAACTATACTTCACATAAACCAGGGCTTGACATTAACTTCTTTGTTCACCAGCCACTGTGGCTAGTCATTTACCAAATTTACTAGCCACTTGGCATTTTCGCTAGCCAAAATTTCCACAAATGCTCATTGTGGATACGTACCCATCTAAATTTCTAAAGAATGCAAATTATGTAGCCAGAGGTACGTTTGGCTGAATTTTGTCTTTAAAATGAACGCTACGGAGCGGTATGACAGCTTCTGTTCCTTTTCGCGGTACCAGCTGACCGCTTACCTCCATGTGTACAGCTTTTTCGCTGTGACCAGTTTGCCCAGTAGCTCGCCACGTACGTTGGCAGACTTGGGACGCAGAACGGAGTTGACCACGATGATGGGGTTCG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa10727

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000051717	Nonsense	310	637	7	13
ENSDART00000132800	Nonsense	310	637	8	14

Genomic Location (Zv9):

Chromosome 19 (position 45584354)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	44482576
GRCz11	19	44078149

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

CCAGACTGAACAGACCACACTAGWCCACAATGAAGAGGAGGCCTTTGCTT[T/A]GGAGCCCATCGACATCAMAGGTCAGTCAGAAGAGAAAAGTAGTWGCACAG

Long Flanking Sequence:

TACTTCAGTTTCTTAATGTTACCTTATTTATAATCATATCGTCTGTTAAAAAACAACTAACTGTGAAATGTGATGTACAGTGAAATTTTTAGTTCATCTTTTGTTTACTATATTTATGTTTAAAAATCAAATACAACATAATCAAATAAGATCAAATCCTTTTCTTTTCTTAAATACTCAAGCTTATTTATTACATAAAGTGTTTTTGTACATTTTCTGGAATTATTACCTTTATAAAATCCTATATCATGAAAGATATCGTTACCTTAACATTAAATAAACTTTCTCATACTTCTTAAATAAAATTTTGGTCATCCAGCCCTAGCCAATATCTATTTTATGTCTGGTACTTTGCATAGTAATTTTATTTCTTACATTTCATCCGATAGCTGCAGGAGGTCCAGACAGCCCTGATTCTGGCCCTGTGGAGCCTTTGCCCACCATGACAGACCAGACTGAACAGACCACACTAGTCCACAATGAAGAGGAGGCCTTTGCTT[T/A]GGAGCCCATCGACATCACAGGTCAGTCAGAAGAGAAAAGTAGTAGCACAGGGCTCTGAATGTGGCTTTTAGTCCAGTCAGCAAAACTATACTTCACATAAACCAGGGCTTGACATTAACTTCTTTGTTCACCAGCCACTGTGGCTAGTCATTTACCAAATTTACTAGCCACTTGGCATTTTCGCTAGCCAAAATTTCCACAAATGCTCATTGTGGATACGTACCCATCTAAATTTCTAAAGAATGCAAATTATGTAGCCAGAGGTACGTTTGGCTGAATTTTGTCTTTAAAATGAACGCTACGGAGCGGTATGACAGCTTCTGTTCCTTTTCGCGGTACCAGCTGACCGCTTACCTCCATGTGTACAGCTTTTTCGCTGTGACCAGTTTGCCCAGTAGCTCGCCACGTACGTTGGCAGACTTGGGACGCAGAACGGAGTTGACCACGATGATGGGGTTCGAATTCGATGAAGAACGGTTTCAGAAACCAGATAAAGCAAA

Associated Phenotype:

Not determined