ZMP
si:dkey-114c15.1
Ensembl ID:
ZFIN ID:
Description:
Novel protein [Source:UniProtKB/TrEMBL;Acc:A3KQF2]
Human Orthologues:
CCDC42, CCDC42B
Human Descriptions:
coiled-coil domain containing 42 [Source:HGNC Symbol;Acc:26528]
coiled-coil domain containing 42B [Source:HGNC Symbol;Acc:37100]
coiled-coil domain containing 42B [Source:HGNC Symbol;Acc:37100]
Mouse Orthologue:
Ccdc42
Mouse Description:
coiled-coil domain containing 42 Gene [Source:MGI Symbol;Acc:MGI:3045254]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa40410 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa45198 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa40410
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000051530 | Nonsense | 92 | 313 | 3 | 8 |
| ENSDART00000144846 | Nonsense | 92 | 286 | 3 | 6 |
The following transcripts of ENSDARG00000035550 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 24860141)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 22687406 |
| GRCz11 | 5 | 23191206 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAAGGAAGAGGAGAAACTAAAGAATTCCCTACTGCAATATAACAAGTTTT[T/A]GCAAGCAAGGCAACTTTCTGAAACAACTGCATCTATCAATGGATAATGTG
Long Flanking Sequence:
GGAGGATTATTTTCGATTGGTTTTCGAAGAACGACTCTCATTGTAAGTAAATATTATTTATTACACTCCAAGTGCTATTTTAGAATTAATAATGTGCTGCTGGATGAGCTGAAGCGCAATTAACTGTTGTCAAAGCTTGGTTTAAACTGATTTAGATATTTTATAGTGGATTTCATGTTCTTAGAGATTTTTCAAACTTCTAAATTCAGAAATAAGGCCGAACATGAAGGCTTCAAGGATATGAAAACAACTGCCATGCAACTTCTGGAGGCGCGCGAGCAGAGCGCGTGCGTGAGCAGAGCACTGGAAGTCCAGAAAGAGGTAGGATGTGTATGGTTATTATTTACATTTTAGCGCTTACATTTTAATCAATATGTATTTACGCTCTGTCTATTGTCAGGAGATGCAGATGAAACAGGAGAGTTTAAAAGAGAGAGAAGAGAACATTAAAAAGGAAGAGGAGAAACTAAAGAATTCCCTACTGCAATATAACAAGTTTT[T/A]GCAAGCAAGGCAACTTTCTGAAACAACTGCATCTATCAATGGATAATGTGTTTAGTGGCTTGGTGTTTGGTTCTACTTTAATGTCTTTCTCTCCATACAAGGAAAATGATGCCAGGCGGTTACGTGCCATAAAGAAAGCAGAGGCAGAGAGAGCACAAACCAGACTGAAAGAACTGGAGATTCAGAAGCTAAAGACGGAGAATGATGTCCTGCTGGCACGAAAAGAGCTGCTGGAAGAACGTGTCGGAAAAGCCAAATGCTACCAAGAGTTCCTTGAGAGAGCTGCAAAAATGTCCAGAAAGGTAGTTTGTATTTGTTGTTAAAGTATGCCAAGCCTCTTTAGTCCATCAGGTCTGTCCCAGGTTTTGCTGAAGAGTGAGATTTTTTTGCACTTTGAGAGTTATCTGAATTAAACACAGTATAGGGCAAAGTTGGTTAGCTTTGAGTTGCAAAATTATTTAAAGAAAGAATGGGAATGTTTCATTACAGAGCAATGCATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa45198
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000051530 | Essential Splice Site | 234 | 313 | None | 8 |
| ENSDART00000144846 | Essential Splice Site | 234 | 286 | None | 6 |
The following transcripts of ENSDARG00000035550 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 24862380)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 22689645 |
| GRCz11 | 5 | 23193445 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAGCTACAGACACAGCTAGACAACATTCGCATAGAAGCATACAAATGGG[T/A]AAAATCACACATGCACGCACACATTTTCACTTAGATAAATGTATCAAAGG
Long Flanking Sequence:
ACTCAGTTCACCTATAGTGCATGTTTTGACTGTAGGGGAAACCGGAGCACCCAGAGGAAACCTAAACAAACACAGGGAGAACATGTAAACTCCACACAGAAATGCCAACTGATCCAGCAAGAGCTCGAACCAACAACCTTCTTGCTGAGGTGATTGTGCTACCCACTGCACCACGTGACATCTGATTTAATCTAATTTAATAATATTTTTAACACTCATTGTAACATGTTATTTTTCTTTTTCTGTCTATTTGTCCTCTCTTTTTATGACATTTGAGTTTGAAAACCCTTGCCAAGTCATTGATCGTATTCAAGCACTGCAGTCAATCAACAAGGAACTTCTAGAAAATCAGACAGTTTTGGAGAAGGAGAGAGAGAGAACAAAGCTGGAACTGATGCAATACATAAATAAACAGCGAACAGCTCTTCTGCACTATAACAACCAACTGCACCAGCTACAGACACAGCTAGACAACATTCGCATAGAAGCATACAAATGGG[T/A]AAAATCACACATGCACGCACACATTTTCACTTAGATAAATGTATCAAAGGCATAGTTCTACCAGAATTGCTAATTATGTCATCATGTACTAACTCTCCACTTTTTGGAAACCTGTTCAAGTTTCTTTCTTCTGTCAAACACACAAAAAAAATTAAATATGTTTTTCCAAGAATTGTTTGGAAGAAATGGAGGATGAGTAAAGGATGAGAGAATTGTTATGTCTCTTTATTGTGCATCTACAAATCGACACAGATATAGCATCTCTGTTATCTGTACAGTTCGGTTTTAGAAAATTAAAGACTGTTTGCTTTACAGGAGATAAAACTGAAGCACTTCCAAACCACAGCTGCAAAGGAGACACTAGAATTTGCTCAGCTAAAGACCACAGTTCGTAACATTTATCAAATGATCATCACACATTACATCAGGAGGGTCTCTGAGCACACCGAGGACACCTTTAAGCAGTTGGAAACGGTAAATAATGCAGTAATTCAATGTTT
Associated Phenotype:
Not determined