Busch Lab

ZMP

ubtf

Ensembl ID:
ENSDARG00000035066
ZFIN ID:
ZDB-GENE-030616-252
Description:
upstream binding transcription factor, RNA polymerase I [Source:RefSeq peptide;Acc:NP_001005395]
Human Orthologue:
UBTF
Human Description:
upstream binding transcription factor, RNA polymerase I [Source:HGNC Symbol;Acc:12511]
Mouse Orthologues:
Ubtf, Ubtfl1
Mouse Descriptions:
upstream binding transcription factor, RNA polymerase I Gene [Source:MGI Symbol;Acc:MGI:98512]
upstream binding transcription factor, RNA polymerase I-like 1 Gene [Source:MGI Symbol;Acc:MGI:35882

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa25244 Nonsense Mutation detected in F1 DNA Not yet available
sa33145 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa25244
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056614 Nonsense 339 735 11 22
ENSDART00000126915 Nonsense 339 447 10 13
Genomic Location (Zv9):
Chromosome 3 (position 19940448)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 19901423
GRCz11 3 20051163
KASP Assay ID:
554-7693.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCCAGCGCTGGAAACTCCTCAAACAGGCCGAGAAAGACGCATACCAAAAG[C/T]GATGTGAACAGGTCTGTAATGCACTCATTCAAACAGTGCTTTTATTTGGC
Long Flanking Sequence:
GATATGTCGGTAACATTTTTTTTGATGGCCTATTTGAGTATTAGTAGACTGTCTGTTTAATATCTGCTGATATTGCTCCTTCAACAGACATTTAACTCACTATAAGGAACTTTGTAAGTACTTGTCAACTTACACTAACCCCAACCTCACAGTCTACTAATAATCTAATGAGAATTAGTTAACATGTAGATGCAATGTAACTTAAATTCAACAAATGGACCATCAAAATAAAGTGTGACCAATATTTCTTATCTTTCAAATGACCAGAATTGTTTTTTTTGAAGTTTTAGTTTTTGTACAGTGTGTATAAAGTCAAATCTCTCATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGAAACGGTTATTCTTTGTTCTGTGCTGAGCTGATGTCCAGTATGAAGGACGTTCCCAGTACGGAGCGTATGGTCATGTGCAGCCAGCGCTGGAAACTCCTCAAACAGGCCGAGAAAGACGCATACCAAAAG[C/T]GATGTGAACAGGTCTGTAATGCACTCATTCAAACAGTGCTTTTATTTGGCACACTTCCATATGTTTGTCACCAGTTGATAATCTAAACCAGAGGTGCCCAAATGCAGTCTTGGAGGGCCGGTGTCCTGCAAAATTTAGTTCCAACCCCGATTGGACACGCCTAAACTAGCAAAACAAGCTCTTTTTAGGTATACTAGAAACTTCCAGGCAGGTGTGTTGCAGCTTAACTATGCAGGACTCTGGCCGTCCAGGACTGGATTTGGACATCTCTAAACAAACCTACGTTGGTGCATAAAAAGTAATTTCTTGCTTTAAATTTGCTCTACACAGAAAAAGAAAGAATATGAAGTTGAGATGAACCGCTACTTGTTAGTAAGTATACCTTAATCATAATCATTTTTATTCTTTGTTTTTATTTTCTTATACTTCTCTCTTTTATTCCTGTTTATGTAAAGCACTCTGAATTAGCTTTGTGTATGAAATGTTCTATATAAATAAAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33145
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056614 Nonsense 556 735 17 22
ENSDART00000126915 None None 447 None 13
Genomic Location (Zv9):
Chromosome 3 (position 19937254)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 19898229
GRCz11 3 20047969
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GATCCCCTGCCCCAGTGATAACCCCTGGGAAAAAGATGAAATTTGACGGC[G/T]AACCTAAGAAACCACCCTCGTAAGTTTATTCAGTGTGTGTGTGCAAGAAC
Long Flanking Sequence:
TTTCTACAAACAAAACTCTTCATGTGCTCTTTGTTATATGTAGTTTGCAACATATTGGTGTTGTGTTTTCCCTTCTTTTTTCCTGTAATGTACTTTAGTTGGTCTAAAAAGGATTTTTAAAAAGTCTTAAAATGACCCTCATAAAACCTGCTGAAGCCCTGATTATATACTAGTATATAATATATTAATCTCCCTCTTTTCTTTCACAGAATGATCGGGCGAAAGCTCAGAAAACCATGGAGGCCACCTGGAACACCATGGAGAAGAAGGAGAAGATCGTGTGGATCAAGAAAGCTGCTGAGGACCAGAAGAGATATGAAGTGAGTTCTGAAAAATTCCAAGAAATTAGTGTCTGCTGCCTACATTTTTTCATAGAAATGTAATGTGTGAAAGTATTCACCCCCCTTTTTTTATTCTTCTATCTTGAACAGAGAGAGCTGAGTGAAATGCGATCCCCTGCCCCAGTGATAACCCCTGGGAAAAAGATGAAATTTGACGGC[G/T]AACCTAAGAAACCACCCTCGTAAGTTTATTCAGTGTGTGTGTGCAAGAACTGATTATTTACAATTCTCACATTTAGACCTCCTAAATGAAGAACTACTAGTGTATGAGGAAGCTTAATTGACATGCTTCATCTATCTCACTGGTTCTACTTAAATCATTTGTACAGTTAAGTATACAGTTCTACCATACAGTTCTACCACTAACAATGTTTAGAATATTTAAATATATTAATACATATATTAATCAGTAAGTTACTGGTTTGTAGTGTATTTAATATATTAGTTTTATTTTGTAATTGAAGCTAATATGGCATAGTTCACCTTCTGTTGAACTGAAGAAAGCTGCAGATCTGTAACCATTGACTTCCATAGTAGGAAACATAAAGATGTACCAGTCTTCTTAATAATTCTCTCTTCACGCTTCTACAGGAATGGTTATCAAAAGTTCTCTCAGGAGATGCTGTCGAATGGCGAACTCAACCATCTGCCCATGAAAGAGCG
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa26042
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056614 Essential Splice Site 663 735 20 22
ENSDART00000126915 None None 447 None 13
Genomic Location (Zv9):
Chromosome 3 (position 19935117)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 19896092
GRCz11 3 20045832
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAAACCAGGTGGCACCAATGCTAAAGTCAAACCTAAGGCTAAAAGATCGG[T/A]GAGTTTGATCACACGGGCTATTAAATCACTCTTTATTTCAACATTTCATT
Long Flanking Sequence:
TTATTTATTGCTGTTTATGTTTTAAGTGATATTTATAAAATATTGTAAATTTGATCTGGTTTTGCAATTAAATAAATAGCCAGAGAAGCTGATGTGGCAATAAAATTCAAAGCTCTCACCGTTTAGCATATATTTAACCATTTGAGGATTAATTTCTAAAATTGACTGTTTAAATGTGTTGAACTGAAGAATAATAAAATGAATTTCTCCCCCACAGAGTATATCATCACAAGAGCGAGCTGCGTATAAAGAATACAATTCTCTGGTGAGTGAGAAACATATTCCTTCTCGAATCAGACTTGAATCATCTACCACTTAAGAGTCTTTATTATTATTATTTACATTTTTATTAACTATTAAAGGCAATACTCTTAATTTAAATGTGACTATTTCTGCCTATTGATTGATTTTTATTTCCCCTGCTTTTCTTTAGAAACGGAGGAGTACAGCAAAACCAGGTGGCACCAATGCTAAAGTCAAACCTAAGGCTAAAAGATCGG[T/A]GAGTTTGATCACACGGGCTATTAAATCACTCTTTATTTCAACATTTCATTAAATCACATTTTTATTGTTGGTATGGTTTTATGTATTATTTCATTTTGTTCTTGTCAAAAGGACGATGAAGAGGATGAAGATGAGGACGATGACGATGAGGATGATGATAAGGACTCTGACGGATCATCCTCTGATGACAGTGATGATGACGATGATGACGACGATGAAGATGTAAGATTCATAGCTTAGCTTTCCTCGCTTATGTCGGCTCAGACTTTCATTTTTACTATAAATTACTTTAGGATATTTTCATGTGGGTGTCTCACAACTAAAAATAGATCTGGTACTGGATATCGTAGCCTCTGTTACTTTTTACCTAGCACTTTTTTTTGTTAACATTTAATATAATTTACTTAGGATATGCGTTTTCACATTCCAATGCCTAATTATTAAATAGTTAAAATGACTGTAATTCAATTAAATGTTCTCAAGAATAAAATATAATGTGT
Associated Phenotype:
Not determined