ZMP

si:dkey-224e22.2

Ensembl ID:

ENSDARG00000034941

ZFIN ID:

ZDB-GENE-061207-59

Description:

Beta-galactosidase [Source:UniProtKB/TrEMBL;Acc:A2BIK1]

Human Orthologues:

GLB1L2, GLB1L3

Human Descriptions:

galactosidase, beta 1-like 2 [Source:HGNC Symbol;Acc:25129]
galactosidase, beta 1-like 3 [Source:HGNC Symbol;Acc:25147]

Mouse Orthologues:

Glb1l2, Glb1l3, Gm1110

Mouse Descriptions:

galactosidase, beta 1 like 3 Gene [Source:MGI Symbol;Acc:MGI:1918143]
galactosidase, beta 1-like 2 Gene [Source:MGI Symbol;Acc:MGI:2388283]
predicted gene 1110 Gene [Source:MGI Symbol;Acc:MGI:2685956]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa6534	Nonsense	Mutation detected in F1 DNA	Not yet available
sa36723	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa6534

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000098523	Nonsense	68	633	3	20
ENSDART00000132775	Nonsense	30	222	1	7
ENSDART00000139690	Nonsense	30	603	2	19

Genomic Location (Zv9):

Chromosome 18 (position 43166919)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	44756810
GRCz11	18	44750264

KASP Assay ID:

554-5216.1 (used for ordering genotyping assays)

KASP Sequence:

TTCACTTTAGCAGGAGCTCCGTTTCGGATCTTGGGAGGCTYCATCCACTA[T/A]TTTCGGGTGCCCAGGGCCCACTGGAGAGATCGGCTGCTGAAACTGAAGGC

Long Flanking Sequence:

CAACAGATGAACTGAAAAATCTACCTTCTGACACTTTTATAAATGATCAAGTAGATGTCAAGTTATTATGTGTTGCTCTTACAACTGGGATTGATGACAAGTCATTTGTCAGGTAGTGTATTTTTAAGAATGAAAGTACATCAATGCATATTCCATACAGTTAAGTGTGGGTCTTTTTCACCAGGGACTATAAATTTTAATAACTCTCTATGAACATTTAGGCCAGACAGCAGACATGAAAACTGTGCACATAGAAGGAAAAAGTCTAAAATTAAAATAAGATTAAGATAAAATGCAATGACAATAACAGTTCTAATCATAATTCTAATAGTAAGCGTAGATTGCACTAAATCTTGAGTGTGAGAATAGTTTTTTTATGTTTTTTTTTTAATCTTGTGGCTTTTTTAGAGAATGTCAGAGAGGGAGGGACTGAGGGCAGACTCCACCCACTTCACTTTAGCAGGAGCTCCGTTTCGGATCTTGGGAGGCTCCATCCACTA[T/A]TTTCGGGTGCCCAGGGCCCACTGGAGAGATCGGCTGCTGAAACTGAAGGCTTGTGGTCTCAACACTCTCACCACGTAAGATCATGACATGCGTTTAAAGCACAGATTTTGTTTCTCAAAATCTCCATATCATATAAAAGCATCATTATACAGCAAAGCCACCACAGAAACCAAATCTGAAGCAGCATAAATTTTGAAAAATGTGTATTTGCATAAAGCCTTTACTGTAATTTCATAGCATCTTAACAGTAAATTCTGAGCAGATAGACACCCACTTTAGGACCACCTTAATGGGGACCTATTATGCAAAAATCACTTTTATAAATGGCTTAAACACAGTTGTGTGGCACCAGTGTGTGAATATAACCAGCTCATAATGGTAAAATGTAATGACTTCTATTTTTTATAATCACACTTCATAAAAACAGTCTGCAGAAACACTTTGATTAACATTATTCCTGTGTGCATGTCATCAGAGGGAGAAAGCCCCGCCCATTAGTG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa36723

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000098523	Essential Splice Site	338	633	11	20
ENSDART00000132775	None	None	222	None	7
ENSDART00000139690	Essential Splice Site	300	603	10	19

Genomic Location (Zv9):

Chromosome 18 (position 43173974)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	18	44763865
GRCz11	18	44757319

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GAGCGGAGCAGTTGATTTGGGCACCTACAAACCACAGACAAGCAGCTATG[G/C]TTAGTAGTTTTAATAATCATGCCCACATGAAAAATAAGAATAGTAGTTTA

Long Flanking Sequence:

CCTTCAAGATGCTTCGTATTTAATGCACTTGGGCTCAACCACTTTCACCGGCAGAGCTCTGATATTACTAAACGCTATTCACTGTTTTATTAAAGGAGAGGAGCTGTTCTGTCTCACTCTCTCTTCATGTTTCAGTTGAGGTTACTTTAAACATCGAATAAAAATGCACAATTCAAAGCACTTCACAAGACCTTTAACAGGAAAAAAGCAACTAGATCAAGCAGTAAATGATGACAGAATTGTTGTTTTTAGGTGAACTGACGCTTTAACAAATAGCTAAATAGGTATACCGAATTAGTATATGAGTGTAAGTTGTACTGTCTACATTCAGCTTTGTGTCTGTGTTTTCTCTGTTATGACAGAAATGATCTCCATAGTTCGAGAGCTTCTGGATCGCGGCGTCTCCATCAATTTTTACATGTTTCATGGAGGGAGCAGCTTTGGATTTATGAGCGGAGCAGTTGATTTGGGCACCTACAAACCACAGACAAGCAGCTATG[G/C]TTAGTAGTTTTAATAATCATGCCCACATGAAAAATAAGAATAGTAGTTTATATTAAATACAATAGTGTTTTTAAGCTATACTATAGTTAAGTGTGTATTACTGTATATATTATAGTGCAGTGTTTCTCAACTGGTGGGTCAGTGGGTCGCAGAGTGTGAGATCAAAAAACCCAATAAAAGTTAAAAAAAAATTTTGTTATTTTGCTTATATCGGACTTTTATTTTGAAATATTTATTGTGTGTGTGTGTGTGTATTTGTGTTTGTGTGTGTGTGTTTTTGTGTGTGTGTATAAACTGATTTCACTCAAGTGATTTTACTCTTGGTGAAGATCTACTAAATGCCATTCTCTGTTTCTGTCTTAGATTATGATGCTCCACTGACAGAAAGCGGCGATTATACAACAAAGTATCATCTCTTGAGGAGTCTGCTGAGCTCCTACAGCAGTATGTTTCTACACTGTTGCTTCTTAATCTGTTATTTAAAAATGAATTGATGTATT

Associated Phenotype:

Not determined