ZMP

cx52.6

Ensembl ID:

ENSDARG00000034930

ZFIN ID:

ZDB-GENE-040310-6

Description:

connexin 52.6 [Source:RefSeq peptide;Acc:NP_997984]

Human Orthologues:

GJA10, GJA9

Human Descriptions:

gap junction protein, alpha 10, 62kDa [Source:HGNC Symbol;Acc:16995]
gap junction protein, alpha 9, 59kDa [Source:HGNC Symbol;Acc:19155]

Mouse Orthologue:

Gja10

Mouse Description:

gap junction protein, alpha 10 Gene [Source:MGI Symbol;Acc:MGI:1339969]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
hu2504	Nonsense	Confirmed mutation in F2 line	Not yet available
sa43436	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

hu2504

Status:

Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000042123	Nonsense	329	466	1	1
ENSDART00000121815	Nonsense	329	474	1	2

Genomic Location (Zv9):

Chromosome 20 (position 23943849)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	20	24062650
GRCz11	20	23961750

KASP Assay ID:

554-0065.1 (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GATCTGTGCAGCCTCTGAGACAGGACCGTCTTCCAAGCCAACCCGAAATT[C/T]AAGTTCTTCAACAACTGGGAATCAAAGAACGAAGGTCCATTCCAGACAAC

Long Flanking Sequence:

CCAGGTCAGTGGTGGAGGTGGGATTCATAGTGGGGCAGTACATGCTCTACGGTATCGGACTGACGCCGCTGTACAAGTGTGAGCGTGATCCTTGCCCCAACAGTGTAGACTGCTTTGTTTCTCGGCCGACAGAGAAGAACATCTTCATGATTTTCATGCTGGTCATATCAGGAGTGTCCTTGTTCCTCAATCTCCTGGAGATTTTCCACCTTGGTGTGAAAAAGATCAAGCAGACCATATATGGATCCATGTACAGCGACGACGACAGCATTTGCAGGTCAAAGAAAAACTCCATGGTCCAACAAGTGTGCTTCCTTACAAATTCCTCACCACAAAAACAGTTGCATTTGACACACACTTCCCTTGCCATGGCACCTGATGGACAGATGGTACCTTTGCCTATCTATATGCAGACAGCTGGTCATGTAGTGTCCAACATTAACCCAAATGGATCTGTGCAGCCTCTGAGACAGGACCGTCTTCCAAGCCAACCCGAAATT[C/T]AAGTTCTTCAACAACTGGGAATCAAAGAACGAAGGTCCATTCCAGACAACCGTCTGCAATCCTGCAGCAGTGAGGATTCTGGCCCCAAAGGTTCCGAACCACCGAAATATTCTCAGCAGCCCCGAGCTTCATTCAGAGCCAGTCATATAGAAATACCAGCAGCATTAAGGAAACACAGCCGTGTTAGTCAGTGTAAAGACTTCAGTGAGGAGAGTGATTCGGTGGAAAGTGGGAACTATCCTACTGCCAGGAAAGCCAGCTTCATGTCAAGGGGACTTTCAGAGAGCCCGTCTGAGAGTGCAGCCTCCAAGAGTGGATCAGACACAGAGGCCAACCGTATCACTCAAGGGGAGAGTCCCGCTATGACACCACCCCCTGCAGCAGGACGTAGAATGTCAATGGTAAGAAAATTCTGATAAAATCCATTATATACACACACACACACACACACACATATATATATATATATATATATATATATATATATATATATATATATA

Associated Phenotype:

Normal

Stage	Entity	Quality	Tag
Larval:Day 5 ZFS:0000037	whole organism ZFA:0001094	quality PATO:0000001	normal PATO:0000461

Mutation Details

Allele Name:

sa43436

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000042123	Nonsense	384	466	1	1
ENSDART00000121815	Nonsense	384	474	1	2

Genomic Location (Zv9):

Chromosome 20 (position 23944015)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	20	24062816
GRCz11	20	23961916

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GCAGCCCCGAGCTTCATTCAGAGCCAGTCATATAGAAATACCAGCAGCAT[T/A]AAGGAAACACAGCCGTGTTAGTCAGTGTAAAGACTTCAGTGAGGAGAGTG

Long Flanking Sequence:

ATCAGGAGTGTCCTTGTTCCTCAATCTCCTGGAGATTTTCCACCTTGGTGTGAAAAAGATCAAGCAGACCATATATGGATCCATGTACAGCGACGACGACAGCATTTGCAGGTCAAAGAAAAACTCCATGGTCCAACAAGTGTGCTTCCTTACAAATTCCTCACCACAAAAACAGTTGCATTTGACACACACTTCCCTTGCCATGGCACCTGATGGACAGATGGTACCTTTGCCTATCTATATGCAGACAGCTGGTCATGTAGTGTCCAACATTAACCCAAATGGATCTGTGCAGCCTCTGAGACAGGACCGTCTTCCAAGCCAACCCGAAATTCAAGTTCTTCAACAACTGGGAATCAAAGAACGAAGGTCCATTCCAGACAACCGTCTGCAATCCTGCAGCAGTGAGGATTCTGGCCCCAAAGGTTCCGAACCACCGAAATATTCTCAGCAGCCCCGAGCTTCATTCAGAGCCAGTCATATAGAAATACCAGCAGCAT[T/A]AAGGAAACACAGCCGTGTTAGTCAGTGTAAAGACTTCAGTGAGGAGAGTGATTCGGTGGAAAGTGGGAACTATCCTACTGCCAGGAAAGCCAGCTTCATGTCAAGGGGACTTTCAGAGAGCCCGTCTGAGAGTGCAGCCTCCAAGAGTGGATCAGACACAGAGGCCAACCGTATCACTCAAGGGGAGAGTCCCGCTATGACACCACCCCCTGCAGCAGGACGTAGAATGTCAATGGTAAGAAAATTCTGATAAAATCCATTATATACACACACACACACACACACACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACAGTTGAGATCAAAATTATTAGCCCCCCTGAATTATTACCCCTCTGTTGATTGTTTCCCCAATTTCTACAGTAATTTCAAATTTTCTTTAATAGAGAGATGATTTTTTTCATCACACTTGTCAACATAACACACACATAT

Associated Phenotype:

Not determined