ZMP
chrne
Ensembl ID:
ZFIN ID:
Description:
acetylcholine receptor subunit gamma [Source:RefSeq peptide;Acc:NP_001003772]
Human Orthologue:
CHRNE
Human Description:
cholinergic receptor, nicotinic, epsilon [Source:HGNC Symbol;Acc:1966]
Mouse Orthologue:
Chrne
Mouse Description:
cholinergic receptor, nicotinic, epsilon polypeptide Gene [Source:MGI Symbol;Acc:MGI:87894]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa18813 | Nonsense | Available for shipment | Available now |
sa15968 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa18813
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000112487 | Nonsense | 187 | 329 | 6 | 10 |
ENSDART00000136428 | Nonsense | 187 | 517 | 6 | 12 |
Genomic Location (Zv9):
Chromosome 5 (position 40046329)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 37845719 |
GRCz11 | 5 | 38445872 |
KASP Assay ID:
2259-6248.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTGCAGGTCTCAGACATACAGTGCAAATGAGATTGATATTGTACTGGCA[G/T]AAGATGAGAACGGAAAGCCTATTGAGTGGGTGGACATTGATCCTGAGGCT
Long Flanking Sequence:
GAACACATCTGAGTATCATGACATTGAGCAAATTCGTGTGCCATACTACACAGTGTGGCTACCAGACATAGTATTGGAAAACAAGTGAGTTGGCAGTAAAACATTAAATTTGCTGTTATTTTCTCTCTGTTTTACTTACAAAATAACCTCTTTTCAGCATTGATGGCAAGTTTGATGTGGCATACTACGCTAATGTGCTGATTTCATCTGATGGCTCCATGTACTGGCTTCCCCCTGCTATCTATCGCAGCACCTGTGCTATTGAAATCACCTACTTCCCTTTTGACTGGCAGAACTGCACACTGGTCTTCAGGTTGGCACAGATTGATCCATGGAAATAGATGACAAGATTTTGGATCAAATTATTTCGTTGTATTTTTAATTATTTTCATAAACATATACATTTTATATTGTATATCACATTTATGTAACATTTTGTTTTATTCTTTATCTGCAGGTCTCAGACATACAGTGCAAATGAGATTGATATTGTACTGGCA[G/T]AAGATGAGAACGGAAAGCCTATTGAGTGGGTGGACATTGATCCTGAGGCTTTCACAGGTGCCATGCGTACACATTTTATTATTTATTACACACAGACATAGAAGAAAGAAGGAATTATTACTTTAATCGGCCAGAAAATATTTAACTGACAAAAAGTGATGGGTAAAACCAGGGCTGTATCAATATATTAGTATGGGTTAATACAGTAATCAAAGGAGTAATGATACAATCAGTTTTGACAAAGTTACTTCAAAAATGTAATTATTTACATCATTAAAATAATATTACTATATGTCTAAAACGTTATTTAATTTACTTGACTACTACTGAAAATCTATATACATCTCAACAAATAGACAATAAAAGTTAAGTCAAATGTGGGCTTTTAGCTTTATTAAACATCGTAATACTAAACCATTTAAAATGAAACTCCGTATCTTTTTTAATCACATGGTCTCACAGAAAACGGTGAGTGGGCAATCAAGCACCGGCCCGCCCGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15968
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000112487 | Essential Splice Site | 311 | 329 | 8 | 10 |
ENSDART00000136428 | Essential Splice Site | 311 | 517 | 8 | 12 |
Genomic Location (Zv9):
Chromosome 5 (position 40044011)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 37843401 |
GRCz11 | 5 | 38443554 |
KASP Assay ID:
2259-6247.1 (used for ordering genotyping assays)
KASP Sequence:
ATTTCTCAGAAAATACCAGAAACGTCACTGTCTGTGCCTCTTATTGGCAA[G/A]TCAGTACCAGTTTTCTCTCTCGACAGTTTCKATTTTTTATCCTTGAATCA
Long Flanking Sequence:
TAAACATCTTAATGCATCCACAGTACAGGGACAAAAGAATTTTCAGTTGTTTCTTTTGGGACATTTTTCCTGAACTTGTGTAGACAGCAAGATGCATGCAGCAAGAGACCAAAGTGTACAACATGATTTAGTAAAAGATGCTTTTTAAAGTGTGATGTGACTAAACAGCAGTCCCAAACATCTATTGAGTTTTCCCAGTTCAAGTAAGTAGAAGCTTGGACTGAGAAACTTTACTCCACATGTCACAATTACACAAGTAGATAAAATTTCTAGTCTCTTTTTCTTAAGGTAGCACTTCCTCTATCTGTGATTTCTGCTTTTGCTCTTCAACATCTCTTTCTATGATACTGTTGTCTCACACTTTCTTACTGTCTCTTCTTCTTAGCTGGCGGGCAGAAGTTGACTGTGTCCATTTCTGTTCTTTTGGCTCAGACTGTGTTTCTCATCCTGATTTCTCAGAAAATACCAGAAACGTCACTGTCTGTGCCTCTTATTGGCAA[G/A]TCAGTACCAGTTTTCTCTCTCGACAGTTTCGATTTTTTATCCTTGAATCATCTGATTTCACTCCTTTGTTTCTGTGTTTCAGGTATTTAATTTTCGTGATGTCTATGACCACACTCATTGTGACCAACTGCATTATTGTGCTCAACTACTCCCTCCGCAGTCCCAGCACACACAACATGTCCCAGAGCATCAAGCATGTATGTTCTGTCCTTAAAACCTTCATAGTTGCAACCCAGGCTCATTATTGATATGCTTCTCTATTTACATTTTTGGAGAGTGCAAAATAATATATCCAGGATGTACATTTTTTTGCAGTTTTTGTTTTTGCTAATCCACTAGAGGCCACTTTTTCTTTTTTTCAGATCTCAGATGTTTTCAAAAGTAATCCAGAAAAGAAAAAGCCCTCATAGGGCCTGATTTTTACCACGTTTTCAGATCCTACCCCGTTCTCACCCTGTTATTGACTTGTTTATTTTATTTTTTGACTTTTGTTTCACCTA
Associated Phenotype:
Not determined