ZMP

nupl1

Ensembl ID:

ENSDARG00000033965

ZFIN ID:

ZDB-GENE-040426-2326

Description:

nucleoporin p58/p45 [Source:RefSeq peptide;Acc:NP_998394]

Human Orthologue:

NUPL1

Human Description:

nucleoporin like 1 [Source:HGNC Symbol;Acc:20261]

Mouse Orthologue:

Nupl1

Mouse Description:

nucleoporin like 1 Gene [Source:MGI Symbol;Acc:MGI:1919094]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa24509	Nonsense	Available for shipment	Available now
sa37897	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa24509

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000019350	Nonsense	350	567	9	13
ENSDART00000122997	Nonsense	351	568	9	14
ENSDART00000126395	Nonsense	350	437	9	12

The following transcripts of ENSDARG00000033965 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 24 (position 25631654)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	24	24878532
GRCz11	24	25023706

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CAGTTAGTAATTGATGGCACTAATGTGCACTCCATCTTTCCTTCCAGCTA[T/A]TTCCGGGCACTAGTGGAGCAGTTTGAGGTGCAGTTACAGCAGTACCGTCA

Long Flanking Sequence:

TTAATTAAAATGTGAATGTATCAGATGTCTTTTTTTTGTCTTTGACTAACTACGTGCCTGATTTTACCATAGGAAATTTGTCAAGGAACAGAAGCAAGTCCAGGAGGAGATTAGCAGAATGTCCTCTAAACCCATTCTCAAAGTTCAAGAGGACATCAAGATGCTCAGACAGCTCTTGTCCATCTGTGCCAGCGGGCTGCAGAGAAATTCCCTCTCCATAGATAAATTAAAGCTGGAAACTTCTCAGGTTAGACCAAACATGTCTTTTGGACCATCTTCATTACTTCCCAGAGTATTGTTCAGTCTTGTAATCTGTCTTTTTTTTCATTCAGGAATTGAAAAATGCTGATATTGCGCTTCGCACCCAGAAGACCCCGCCTGGACTCCAACATGAAAACACAGCACCATCAGAGTGAGTGTGAACTTGTGCGCTATTACTTCCATTTAAAGCAGTTAGTAATTGATGGCACTAATGTGCACTCCATCTTTCCTTCCAGCTA[T/A]TTCCGGGCACTAGTGGAGCAGTTTGAGGTGCAGTTACAGCAGTACCGTCAGCAGATTGAAGAACTGGAGAATCATCTGACCACTCAGGGCAGTGGCTCCCACATCACCCCTCAAGGTTTGTTATACCAGACTGAACAAAGCACTGTCATGTGTTAGCTCTGATATCCACTTAACTTTATGATATCCTCTGTCATGTAGATTTGTCGATGGCTATGCAGAAGCTCTACCAGACGTTTGTTGCGCTTGCTGCTCAGTTGCAGGGAGTTCATGAGAATGTTAAAGTAAGTTTTGAACTCATTTTTTGTTGCATTGTAAATGTTGTTTTTTAATCAGTTATTAATGAGATTATAAATGAGGGTCAAATTAGGCATTGGCTGGTATAAGATTCTGACGGTATGATAATCTTGGATAAAAATATCACGGTATCGTGAACACAATATATTTTATTTTAGGAAACATTTTTTAAAAATTGGATCATTAGCAGTTGATGTAAAAGTTCC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa37897

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000019350	Essential Splice Site	484	567	None	13
ENSDART00000122997	Essential Splice Site	485	568	None	14
ENSDART00000126395	None	None	437	None	12

The following transcripts of ENSDARG00000033965 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 24 (position 25627840)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	24	24874718
GRCz11	24	25019892

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GCCGTAGCCATGGCTGCCACTCTCACTCAGCAGCAGCAGCCGGCTCCAGG[T/C]CTGACCGCCTTCAAGTTCTAGACCTCTTGACTGATAGATATAAGGAATAG

Long Flanking Sequence:

AATCTCAATCTCCCCTCTCTCCCTCCTGTCTAAATGGACAGCTTGCCAAATATGCTTTAACTTATTCAAGCATTAGCTAAGTGTGAACTCTTGAAAATAGAATTGGCGGTGCAGATGGTCTAGTGATCATTGTGCTGTAGCAAAACTGCTCTGAGGTTTCAACACATGGGCCTTTCCTGATCCTGACTTCCCTCTCTTCTACTTCAATTTCTGCCAATATGCTGTCCTCTCAAAGCAAAAAAAAAACAAAAAAACGGTAGTATTGTAATTAAACTAATGTTTTTTTGTTCTCTGCAGACTCTAAAGCATCAGTACCTGGGCTACAGACGAGCCTTCCTAGAGGACTCCACTGACATCTTCGAGTCGAAACGTGTTGCTGGCAAGAAATGGCAGAGTTCTCCGCGTGTCACCACAGGCCCCGCCCCCTTCGGCAGCGTTCCCAATGCAGCGGCCGTAGCCATGGCTGCCACTCTCACTCAGCAGCAGCAGCCGGCTCCAGG[T/C]CTGACCGCCTTCAAGTTCTAGACCTCTTGACTGATAGATATAAGGAATAGAAAGAACGAGGGGAGGGGGAACGGTGGAGAAAGGCAGATAGAGCTAAATAATTCAAAAATAAACCGTAAATTCAGTCAGTGCCATGTCTGTTTTTTTGTTTTATTTTTTGATATGGAGCAACAGGGTTCTTTTAATACACACCGTGTGCCAACTAGTGTGTGGTGAGATTTTTTTAGACGCTGACTGTCCTGCCTGACTTCCATTTTTGTTCTAATTTCTTTTGTTTTGTCAAGAAAGCAATTGCATCATATGCTTTTCTTTTATATAGATATAGCTCACAAGTTTTAATCAAGGGCACATTCCATATCTTAATGAGACAGTCTGTTTGTGCTTTATATGGGTGGACTTCTGTCTTGAGTGGCAGAGAATATCGTGTTTATAGATAGGGTTTGGTCTCAGTTATTTTATTTTTTATTTTTTCTCAACAGCACTATTGTAGCCATCACTAC

Associated Phenotype:

Not determined