ZMP
tbc1d20
Ensembl ID:
ZFIN ID:
Description:
TBC1 domain family member 20 [Source:RefSeq peptide;Acc:NP_001020343]
Human Orthologue:
TBC1D20
Human Description:
TBC1 domain family, member 20 [Source:HGNC Symbol;Acc:16133]
Mouse Orthologue:
Tbc1d20
Mouse Description:
TBC1 domain family, member 20 Gene [Source:MGI Symbol;Acc:MGI:1914481]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa37436 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa29726 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa24082 | Nonsense | Available for shipment | Available now |
| sa16338 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa37436
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000045752 | Nonsense | 20 | 397 | 1 | 8 |
Genomic Location (Zv9):
Chromosome 22 (position 10240214)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 10100382 |
| GRCz11 | 22 | 10130064 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGAAGAGGTCGCGGAGTGTCGGAGCTTCCCCGCTCAATGGAGTCGGAAAA[C/T]AAGGTGTGTTTTACTGAAGTCTGGTCATATATGACAGCAGGAGGAGGAGA
Long Flanking Sequence:
TTTACCGTTTGCTGGAAAACTGTGCAGCTCATTCTAATGGGTGTGACACTTTTTGTTTTTACATTGGGGACTTTTATTTTGAAGGTTTTCTACAAGGCCACCTTGTTCGTGCTGAAACTAAACCACAACTCCCACAATCCTTCACTCCACACGTAAACATTAACCCATATGAAACTACAGCTGGAGCTCCTGAAGCGATTCACATGAAATGACACAAAAGGTGCTCCGTGATCCCGGTTCAGTTCGGCGGATCTCGCTCATTTAAACCCCTGTCATGCGCCACACACACCGGACAGACAGATGACTTTCAACGGACAAGAGTTTATTGAGCTGCGCGGGCCTGAATGAGATGATGTGGCCTTTAAGTTAGCAGAGCAGCTAAACCTGTTGTGTTTTTCTGTGGAGTAAAACGATGGAGCTCGAGTTTGAACATTAGCCACAGGATGAATCTGAAGAGGTCGCGGAGTGTCGGAGCTTCCCCGCTCAATGGAGTCGGAAAA[C/T]AAGGTGTGTTTTACTGAAGTCTGGTCATATATGACAGCAGGAGGAGGAGAAGGGTTTACTGCTTCACTTTAACTGTCGATAAATGGAGAAATGTCGATAATAATGATTTTTACAGTTATAAAACTATCGAGTGTTGGGAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGGTAGAAATGGAACAAATATACGTTAGAGGGTCTGGAATACATCTGTCAGTGCAAACATTGATGTAGATAGATGAATAAATGACTATCTATCTTTCTTTCTATCTAATGTCTAAATAGTTGGGTTAAAAATACCCCGAAATATAACCCAACTATAGGTTATTTTAGCACTTACCCAACTGGGTTATTTTATCTAATGAATTGGGCTATTTTGATTAAATGTTGTTATTTTCCATTCTGGTATTACTATTGCTACTATTACTAGTACTACTATTAAATTTATAATTATGACTGTGTAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa29726
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000045752 | Nonsense | 105 | 397 | 3 | 8 |
Genomic Location (Zv9):
Chromosome 22 (position 10245750)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 10105918 |
| GRCz11 | 22 | 10135600 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAAACAACAAAGACTTTAACCAGGTTCTTCTTGATGTTCAGCGGTCACTT[A/T]GACGCTTTCCTCCAGGTCAGCAGACCTATATTTTATTCTATTTTATTTCA
Long Flanking Sequence:
TCTTTTGAACATAATTGGGTGCTGCTTGTCAATCAAACAACGCTTCTATGTTCTTGCTGTCAATTACGGAAAAAAATTATCGATTAGTTTTATGATAAACCGCCGTGAGTTTAACTCCTGGCACATGCACACAAAGGGGAGTCTGCTATGTCCGGAGAGTCAGATTTTGATATAACTTCTTCACCTCCTCTTGTGGGTGGGCCCACAGAGTTTGTGCTATGCGCTAGTCACTATTAACTGAATGGAGTAGCAGTTCGCAGTTATGTTTTGTTAAATAAGTTGCAGATAAAATTTAAGTTTCAAAACCGCCCAAATTTTGTCAACCCACCTCTGCTATTTTTTACCCACAAAATCTAATTCAAAACCGCCCAATTGGGCAGGAAACCACCCAATCTGGCAACACAGCACAGATCTAAAACCAGTTTTTTGTTTCAGATCCTGTCGATCGAGAAAACAACAAAGACTTTAACCAGGTTCTTCTTGATGTTCAGCGGTCACTT[A/T]GACGCTTTCCTCCAGGTCAGCAGACCTATATTTTATTCTATTTTATTTCATAGTATTATATTATCCAGAATGAGCAGCTGCAGTGTTCGTAACTGAAATCCAGTGTTTTGTGTGTGCTTTTGTGCCTCAGGGATGCCGGATGAGCAGCGTGAGGGTCTTCAGGAGGAGCTCACCGATATTATTCTGCGTGTTTTGGTGAAAAACCCTCAGCTGCATTACTATCAGGGTTATCATGACATCGTGGTCACTTTCCTGCTGGTGCTCGGAGAGAGACTCGCCACTGCCCTCGTGGAGAAACTCTCCACACACCACCTCAGGTCTGAACATATAAATAGAAATTCCTATTCATAAATATAAATGTATATGATTTGTAAAAGCAAATGTGTAGTATCTATTTTTGCCTGTTAGGGGGGGGAAATTTTTTCGTATAATCATTCTCAATTCCTACTAACTACTAGAAATATAAAAAAGTTACGACAGATAGATGGACAGACAGATAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa24082
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000045752 | Nonsense | 131 | 397 | 4 | 8 |
Genomic Location (Zv9):
Chromosome 22 (position 10245944)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 10106112 |
| GRCz11 | 22 | 10135794 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCAGCGTGAGGGTCTTCAGGAGGAGCTCACCGATATTATTCTGCGTGTTT[T/A]GGTGAAAAACCCTCAGCTGCATTACTATCAGGGTTATCATGACATCGTGG
Long Flanking Sequence:
GGGTGGGCCCACAGAGTTTGTGCTATGCGCTAGTCACTATTAACTGAATGGAGTAGCAGTTCGCAGTTATGTTTTGTTAAATAAGTTGCAGATAAAATTTAAGTTTCAAAACCGCCCAAATTTTGTCAACCCACCTCTGCTATTTTTTACCCACAAAATCTAATTCAAAACCGCCCAATTGGGCAGGAAACCACCCAATCTGGCAACACAGCACAGATCTAAAACCAGTTTTTTGTTTCAGATCCTGTCGATCGAGAAAACAACAAAGACTTTAACCAGGTTCTTCTTGATGTTCAGCGGTCACTTAGACGCTTTCCTCCAGGTCAGCAGACCTATATTTTATTCTATTTTATTTCATAGTATTATATTATCCAGAATGAGCAGCTGCAGTGTTCGTAACTGAAATCCAGTGTTTTGTGTGTGCTTTTGTGCCTCAGGGATGCCGGATGAGCAGCGTGAGGGTCTTCAGGAGGAGCTCACCGATATTATTCTGCGTGTTT[T/A]GGTGAAAAACCCTCAGCTGCATTACTATCAGGGTTATCATGACATCGTGGTCACTTTCCTGCTGGTGCTCGGAGAGAGACTCGCCACTGCCCTCGTGGAGAAACTCTCCACACACCACCTCAGGTCTGAACATATAAATAGAAATTCCTATTCATAAATATAAATGTATATGATTTGTAAAAGCAAATGTGTAGTATCTATTTTTGCCTGTTAGGGGGGGGAAATTTTTTCGTATAATCATTCTCAATTCCTACTAACTACTAGAAATATAAAAAAGTTACGACAGATAGATGGACAGACAGATAGAAAGATAAATAGACAGACAGACAGACAGACTTTCCCAGTAGATATTAGCATGTTGTTAGCATGATTCAAGTATGAATTAGCTTATTTTTTAGTGTTAATGAACATGTTGTTAACATATAATATAAATTAGCATGTTGCTAACATGTTTCTAGTGTGGATTAGCATGTTTTTAGTATGAATTAGCTTGTTTATAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16338
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000045752 | Nonsense | 293 | 397 | 7 | 8 |
Genomic Location (Zv9):
Chromosome 22 (position 10248430)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 10108598 |
| GRCz11 | 22 | 10138280 |
KASP Assay ID:
2261-6448.1 (used for ordering genotyping assays)
KASP Sequence:
TGTCMCGCATCCCAGAGGACCTGCCKTATGAAACGCTGATCAGCCGCGCT[G/T]GAGATCTGYTCGTGCAGTTTCCTCCATCAGAGCTRGCCAGAGAGCGCAGT
Long Flanking Sequence:
CTGTGTTTTCAGGGTGGAATAAATAATTGATACTTTCTATTATGTCGGGACTGTTTGTCCTGATTTTTCTTTCCAGCTACTGTAGTTTTTTTTTATATCTGGAGTTTTGATGTTAGACAAGACTCTTCTTAAACATTAATTACTGAAAATTGCCATTTCTATAATTAGAAGAATACTTTTCTCAATACCGTGGCATAAGGTGAAGTAATATTTCACCTTTAAATGTCACTGTAATTACTATAATGTTAAAAAAGGGGTATTCACTACTGTTATAACACAATTGCTATTTTAAAATGCCATTGTCATTACCGTAATGCAAAGAAGCAATTTCATATTTCTCATTGCTATAGCATACAGTTAATCTGTAAAGTAATTATCTGCAGATCGTGTTGCATCGTGAGGAGGAGGTCTTGGACTGTGAGTGTGACATGGCCATGATGCACCACCTCCTGTCCCGCATCCCAGAGGACCTGCCGTATGAAACGCTGATCAGCCGCGCT[G/T]GAGATCTGTTCGTGCAGTTTCCTCCATCAGAGCTAGCCAGAGAGCGCAGTCAGCAGTGAGTTTCTCTTCGCAGTGATTTTACAGACGCCCTCAAAATCAATGGTTACAAAGATTCGGACATTATAAAATATGCTTTCCATTTAGGGTGAACGAGTTCCAGGTTTTGTATTTGAACCGCATAAACTTTTCCAACACACACACTTTCTGATCTAGATATACAACAGCACGGAGCAGATCATACGCACAAGTCAACGCAAACCTGAATTCTGCACTGCATGCTGTAGTGTGCACTTGGAGAAATGGTGGAAATCATGAATCAGATGTGCTCAATAACACAAGCTCTGATATAAACAACATGCTGCTTGCTATTTTTAATAAGGGGAGGGGCTACCCAATAAGTCCCTCCCTTCCTCTGTTTTTGTGAATATTATGTCACGCATCAAACGCAGCTGCACATTTCACACGGCTTCAGAGCACTGTTGGGGAAGGTTGGCTTTCAT
Associated Phenotype:
Not determined