ZMP

gtf2f1

Ensembl ID:

ENSDARG00000032129

ZFIN ID:

ZDB-GENE-030131-4557

Description:

general transcription factor IIF subunit 1 [Source:RefSeq peptide;Acc:NP_956023]

Human Orthologue:

GTF2F1

Human Description:

general transcription factor IIF, polypeptide 1, 74kDa [Source:HGNC Symbol;Acc:4652]

Mouse Orthologue:

Gtf2f1

Mouse Description:

general transcription factor IIF, polypeptide 1 Gene [Source:MGI Symbol;Acc:MGI:1923848]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa26104	Nonsense	Mutation detected in F1 DNA	Not yet available
sa40105	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa26104

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000026090	Nonsense	146	536	6	14
ENSDART00000047660	Nonsense	146	536	7	15
ENSDART00000111878	Nonsense	146	443	7	13
ENSDART00000122357	Nonsense	146	536	5	14

Genomic Location (Zv9):

Chromosome 3 (position 34020392)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	3	33805588
GRCz11	3	33935096

KASP Assay ID:

2259-3721.1 (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TTCACACAGAGTGCCGATGGTGCTTTTGAGGCATTTCCCGTGCACGCCTG[G/A]TATAACTTCACACCACAGGCCAAACACCGCACGCTCACAGCTGAGGAAGC

Long Flanking Sequence:

CATTGCTTAAAGAGAAAATGGATGCATATATATCGTTATATTTGTGAGTGTATTCAGATGTAAGATATCTGACATGTATCTGTAAGTGAAAAACTATTTGAGACAATTAAAAAAAATAATTTAAAAATCTATTCATTATTTTCAAAATTTTCTCTCTTATTGAAAATTGTAATTCTTATAAATATTAGTCTTGCCATTAAAAAGCCATCCACTTTTAAGGTGGCAATAAACTAAATCTGAATAAAATGTGCTCATGACTAATTAAAACCATCGCAACCAGTCGTGCTGACACAATGAGCTGATTTCGGATTTGTTGTTGGTGTTTAATTGCATTTAAAGTGTGTTATTATTTGTTTAGATCTTGTTTTACTGCTGTTTTCTTTCTCTTTGCCACTCAGATTTAAGGGTATAAAAAAAGGGGGCGTTACAGAGAATGCGTCCTACTACATCTTCACACAGAGTGCCGATGGTGCTTTTGAGGCATTTCCCGTGCACGCCTG[G/A]TATAACTTCACACCACAGGCCAAACACCGCACGCTCACAGCTGAGGAAGCAGAGGAAGAGTGGGGCAGGTGAGGGCAAACCTGATTTCTCTTCTGCATTACAAGCTTGCAGTTTGATGATTGCAGCTCATTATTTTTCATTTAGGAGAAACAAAGTGGTGAACCACTTCAGTATCATGCTCCAGCGGCGTTTAAGAGAACAGGAGCGAGGAGGAGGAGATGAGGATGAGGAGGAAGGAGAAAAAGGCACAAAGAAAAAGAAGAAGGGAGGCAGAGGAGGTGACCTGCGAATTCATGACCTCGAGGAAGATTTGGAAATGAGCAGCGATGAAAGTGATGGCAGCAATGGAGATGGTGAGGGTGAGCAAAAGGGTCAGAGAGGAACATGAGTGTGCCTTATCATGCTTTTTATTTAAAGATCAAAGTACATAATGAATATTCAGTAATCAACATTTGATTTTGAATGGGTGTTGTTGAATCATTTTAGGACAACTTTGATGA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa40105

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000026090	Essential Splice Site	378	536	12	14
ENSDART00000047660	Essential Splice Site	378	536	13	15
ENSDART00000111878	Essential Splice Site	285	443	11	13
ENSDART00000122357	Essential Splice Site	378	536	11	14

Genomic Location (Zv9):

Chromosome 3 (position 34016197)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	3	33801393
GRCz11	3	33930901

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CATTTCATGTGAATATGGTACAGTGCTTTTTTCTTGTTGTCTCTGTCACA[G/A]AAGAAGCGCACACCTCCTAAGCGAGGAGGTGGCCGTGGCTCAGCAGGCAG

Long Flanking Sequence:

TATTTTGAGCAAATTTAGCTTGTTTAATGCTATTTGCATTATGTAAGTTACTGTATAATATAAGCTGCAGCTTGTTTCAGAAAAAAAATATATATTCTACAATACAATTTATTATTTTTAAGATAAAAGGTACTATTTGATATTAAAATCCTTATGTATTTCAGACAGCAGCGGCGAGTCCGACAGCTCTGAGGACAGTGATATTGAAGGAGAGGCAGCGTCAGCACTGTTTATGGTGGTAATGGCCTATATTTGTGTGTGTGTGTGCGTGTGTGTGCGTGTGTGCGTGTGTGCGTGTGTGCGTGTGTGCGTGTGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGAGTGTGTGTGTCTGTGTGTGTGTGTCTGTGTGTGTGTGTCTGTGTGTGTGTCTGTCTGAAAAAGAAATATGGATGTTGTGTTTTGATGACATTTCATGTGAATATGGTACAGTGCTTTTTTCTTGTTGTCTCTGTCACA[G/A]AAGAAGCGCACACCTCCTAAGCGAGGAGGTGGCCGTGGCTCAGCAGGCAGTTCAAGAACAGGTAGTCGACCAGGCACACCATCTATTGATAATGCTGCCACTTCCAACACTCTCCGTGCTGCTGCCAGCAAACTGGAGCAAGGTACACTCAACAAAACTCAGTTATTAAAAATTATATTCAAATGTATTAATTTTTATGACGTTGTGGTAGTAGATATAATAAAAAAATACTAAAGCCACCTTTCCACTGCACAAAATACACCCCCTTGTGTCAGTCACATAGAATATTTAGTTTTGTCATTTACCATGGTAAGTGGATTCCAGCGGTGGTGTCTAAAATAATGGAGTGCAAAAGCAAGAGCCTTTAGTTGAATGAATGAATGAATGAATACTAGAAACTCATCATATTAATTAATTACTCATCAGGGAATGTGGAGACAAGATTAAAAATTACAATATTTTTTATTACTCCTTTATGAATAGAATTTTATTAGACTTAT

Associated Phenotype:

Not determined