ZMP
si:ch211-45m15.5
Ensembl ID:
ZFIN ID:
Description:
Transmembrane protein 200A [Source:UniProtKB/Swiss-Prot;Acc:Q5RGQ8]
Human Orthologue:
TMEM200A
Human Description:
transmembrane protein 200A [Source:HGNC Symbol;Acc:21075]
Mouse Orthologue:
Tmem200a
Mouse Description:
transmembrane protein 200A Gene [Source:MGI Symbol;Acc:MGI:1924470]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa36941 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa43367 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa36941
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000041250 | Nonsense | 23 | 497 | 1 | 1 |
Genomic Location (Zv9):
Chromosome 20 (position 2259433)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 2213718 |
| GRCz11 | 20 | 2240424 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGGTGATCACAGGCCTTGCAGCATTGAAAAGGCAAGACTCCACACGCTCT[C/T]AGTATCATCTGTCAGCCCAGAGCCCCGGCCCGGCACCTGAGAAGAAAACC
Long Flanking Sequence:
CTTGGCTGAAAATGAGCTCTGATATCCCTTTTTATTTTCACCATTCATTCAGAATGGACCTTCGGGTCACTCGGAGGGCGGTGGAAGAATACATTTGTGTCACTTCATCTTCGCTGATAAGATATACAGCCAAGTACACAACGTTCCTATGTAACTCCCAACGATACTTCCGGGTTTCTTCCCACCACAGCCTCGACTTCGCTTTTAATGTGAAATCAGTCTAAAGAGCTGAACGGTGCAGTGGCTTTACTTTATATCCAAAGAAAAGAAAGATCTCCAGAGATGCCTTTTCAAGTTGACAGAAATCTGTGTGATATTTCTCTCCAAGGTTATCATATCATCAGAATCTTACACCAGGCCTTGCCTAGATCCGTCGCAGCACTAACATAACCCCTTGTTTCTTCCTCTGTTTGCAGGCTTGTATTGCCATAGCAATGATTGCCACGGGAGGGGTGATCACAGGCCTTGCAGCATTGAAAAGGCAAGACTCCACACGCTCT[C/T]AGTATCATCTGTCAGCCCAGAGCCCCGGCCCGGCACCTGAGAAGAAAACCACCAAGCGGAAGCCTCGAGCGGACGTGGTGGTGGTGAGAGGGAAGATCCGGCTGTACTCCGCCTCAGGGTTCTTCCTGGTTTTAGGAGTGCTGATCCTCATGGCGGGAATCGCAATGGCAGTTCTGGGATACTGGCCTCACAAGGACCAGCCGAAGGCTCCGGAAACCAAGATGTCCGCAAACAACACGCAGAGCTTCGGCCGAGAGCAGGCCGGATCCATCGCACAGTTCCTGGAGCAGCACATGCATTCGGAGAAGATGAAGATGTTGGGTCCCTTTACAATGGGAATCGGGATTTTTATCTTCATCTGTGCTAATGCGATCCTTCATGAGAACCGGGATCGAGAGACCAAGGTCATCCACATGAGAGACATGTACTCGACCGTTATAGACATACACAGCTTGCGGATTAAGGAGCAGAAGTGTACTAATGGAGCATGTATGGGACCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa43367
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000041250 | Nonsense | 248 | 497 | 1 | 1 |
Genomic Location (Zv9):
Chromosome 20 (position 2260110)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 2214395 |
| GRCz11 | 20 | 2241101 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTGCAGATGATGATGATGGTTTAATGAGCGAGGCTAGAGGTGGATTTTG[T/A]TTGCTGTCGCCCACCTATAAGGACCGCTCTGAATGTATATTCGGGTTCCA
Long Flanking Sequence:
GGATACTGGCCTCACAAGGACCAGCCGAAGGCTCCGGAAACCAAGATGTCCGCAAACAACACGCAGAGCTTCGGCCGAGAGCAGGCCGGATCCATCGCACAGTTCCTGGAGCAGCACATGCATTCGGAGAAGATGAAGATGTTGGGTCCCTTTACAATGGGAATCGGGATTTTTATCTTCATCTGTGCTAATGCGATCCTTCATGAGAACCGGGATCGAGAGACCAAGGTCATCCACATGAGAGACATGTACTCGACCGTTATAGACATACACAGCTTGCGGATTAAGGAGCAGAAGTGTACTAATGGAGCATGTATGGGACCCTACGGGGGGGACACTGAGATCCGTACCTTTGGACTGGACAGCCAGTTTGCCTCTCGGCTCGCAGCAAACACACTGATGTCTTTCTCGGGTCTGGATGGAGATGTGCGGTTCTCCCACAGGACTAGTTCTGCAGATGATGATGATGGTTTAATGAGCGAGGCTAGAGGTGGATTTTG[T/A]TTGCTGTCGCCCACCTATAAGGACCGCTCTGAATGTATATTCGGGTTCCAGGATGATGGTCGGTGGGAGGACAGGCGAGGAGCTCTTAAAAAATGCCAAACGCGCTCCATTGTTTCCTCCTCCATCAGTGCGTTCACACTGCCTGTCATTAAACTCAACAACTGTGTCATCGATGAACCAGACATCGACAGCATAACTGAGGATTTAGAGCAGAGCAGGGTGCACTCCAGACCTCCGTCAATGGAGTCGCTGACAGTCCCGGTTCCAGACATCGCCAAAGCCTTCAAACCTCCAGGCGTCCAGCTTCTGCGGAGCAACTCAGCCACTGAATCCGCCAGCTCCACATCTTCCCGCTCATCCCTCTCTCCGGGATCCACCAGCGGGAGATTCCTGTCTCCGGGAGCTGCACGTAAAGACTTCGGCTCCAATAACTCCATCCACATGCTGTCCGCCCACTCCAAATCCCTGGACCTGGAAAGAGGACCCACAAAGCTGACCGT
Associated Phenotype:
Not determined